Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062317
CDS Infomation

pacid=37459108 polypeptide=PGSC0003DMP400041952 locus=PGSC0003DMG400024251 ID=PGSC0003DMT400062317.v4.03 annot-version=v4.03
Sequence

ATGGGTAGAGAGTGGTTATACTGGGGCAGTGGCAGTGGTACTAGTAATAAATCCAGTACT
CAAAGAGGAAGTAGAAGAAAAACAAAAGGAGAAGAAGTCATCAATAATATTATTAATGAA
GAAGCTACACCTCCTCCTGGTGGCTGCATGTGTTTCCAAATCTTCGATTTACCCCATTTT
CAAGTAGCTTTGAACCAACAATCTCGCTCTCTCAAGCAACATCATCATCATCATCCTTCT
TTCTTTCAACAACACAAAGAACCTTCTCTCCTCAAAGGAGTTGAAGCACCAAGAAACAGC
TTGGAATTAGATGAGCCTGTTCCAGAACGGAAATCAGTATCAAGTTCATTGTCGTCTTCA
TCAACCATGAAAGTAGACGAACAAAATTTGAATATCCCGGTAGGTATTCAAATCAGAACA
AGCTGTGATTCGAGATCACCGCGAGTGTCAACATCAGGCGGATCAAGAACAAGGACAGAT
CATGATATATCATCAGAATGTAGCAGCAGCTCACCAGCGGGGACCAAGACCCCAACTCTA
GTAGCTAGGCTAATGGGCCTTGATCTCATCCCTGAAAACAATAACTCTCCTCGCATTTCA
ATTTCAACTAATTGCAATACAAAGTCACAGTCAAAGAATGTGTTGGTTAACAATAATAAT
AGCAGTAAAAACAGAAGACGATTCAGTAGCTTTGAAAGTAGTGATACTAATTATATCACT
ACAGGTACTCTGTCACTACCAGAGACGCCCAGAATATCTTTAGCCAGAAGGTCAGATGTA
GATCATCATCAACGCCACCAGCATCACAGGTTATCTCTTCAAATTAACAAAGAGAACATG
GGTGATGCATTTGAATTTTCAGATTCTTCTTCTACTACCAGTGTCAGTAGGAAAATGGCG
AGGAACAATAGGATGAGTTTTTATCAACAAGAAAATGATAACCAAACGAGAAGTCCAGGG
TACTATGCTAGGCAGATTGTGAAGCAAGTGAAAGAAAGCGTCAGCAGAAAAGTTGGTCAT
GACATTACCAACACTGCTAGTACTAGTATCAGGAGAAAAGATGATCAATTAGCTGCTAAA
TATGATCAAGTTGTGTTGCTCAAACCAAAAAAAGCATCAAATGGAAATGACGATGATTTT
AGACCAAGCAAACAAACAACTCCTTCTTGCTCACCTAGGTTCAGATTTTTGGAGCCCAAG
AGTACTGGTACTAAACATCAAACCTCTCATTCACCCAAATTTTCACCATTATCTCCGCTT
TCAGAGACTACCACTTTATTATTACCAGCAAAAATTGTCACTAAGCCTAAGCCTCAAAGT
TCGCCGAAAGATCAAGTGCAACAAAGAAAAGGTGACAAATTTGTTCCAAAGAAGCCACCG
CAAGCTTGTGATGCTATTCGGAGCAAGAAGGAAGAGCTATTTGTTCGTTCAGCAGCAGCA
ACAAATAAAGCAAATTTTGCGGAGAAGAAATGCAAGCTGAAAACTCCATTGTCAAATCAA
CTTGTTAACACCAGTACTGTTCCAACTATTTTGCCATTAAGGAAAGACCCGTCTCCTCCA
ACCACCAAGTTACTCATTAAGCAGTCTCAGGAATCAGATACTTATCCATCGAAAAGGAGC
AGCAGAGAGTTATCTAGTAGTTCGAGCCATAATAATTCGTACTACTACAAACTCACCACA
CTCCAAGAAAACCGCGACAAATGTAACGGTGTCATTTCCATTGATGGACTCAATTTTCAT
CATCAGTACATTCAGAGAATACTAAAACGTACGGGTCTTGACAAAACTACTCCAATCTCC
TTAGCCAAATGGTACTCTCCTTCTCACCCACTTGACCCCTCCATTTTTCACTACTTAGAA
CTTTTCAATTCTACCACACATAATTTAACCCTCAAATGCAATCGAAAGTTAATTTTCCAT
CTTGTCGACGAGCTACTGGTCGATATCTTGATGAAAAATAACAATTTCAAGCATCGATCG
ATGGATGGGGAGGAATTGATTGACACATTGTGCTCGAGAATACGAAGTTTTCCTTCAGCT
AATTGTCAAGTTCTTGAAGATATTGATGCATTGATAGACAAAGATATGGAAATTGGTGCA
AGTGTATTTTTTGAGGAACAAGTGGAAAGTATAGTGTGTGAGATTGAACGTGAGATTATG
GAAGAAGTGGTGCATGATACTGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400041952
PEP Infomation

pacid=37459108 transcript=PGSC0003DMT400062317 locus=PGSC0003DMG400024251 ID=PGSC0003DMT400062317.v4.03 annot-version=v4.03
Sequence

MGREWLYWGSGSGTSNKSSTQRGSRRKTKGEEVINNIINEEATPPPGGCMCFQIFDLPHF
QVALNQQSRSLKQHHHHHPSFFQQHKEPSLLKGVEAPRNSLELDEPVPERKSVSSSLSSS
STMKVDEQNLNIPVGIQIRTSCDSRSPRVSTSGGSRTRTDHDISSECSSSSPAGTKTPTL
VARLMGLDLIPENNNSPRISISTNCNTKSQSKNVLVNNNNSSKNRRRFSSFESSDTNYIT
TGTLSLPETPRISLARRSDVDHHQRHQHHRLSLQINKENMGDAFEFSDSSSTTSVSRKMA
RNNRMSFYQQENDNQTRSPGYYARQIVKQVKESVSRKVGHDITNTASTSIRRKDDQLAAK
YDQVVLLKPKKASNGNDDDFRPSKQTTPSCSPRFRFLEPKSTGTKHQTSHSPKFSPLSPL
SETTTLLLPAKIVTKPKPQSSPKDQVQQRKGDKFVPKKPPQACDAIRSKKEELFVRSAAA
TNKANFAEKKCKLKTPLSNQLVNTSTVPTILPLRKDPSPPTTKLLIKQSQESDTYPSKRS
SRELSSSSSHNNSYYYKLTTLQENRDKCNGVISIDGLNFHHQYIQRILKRTGLDKTTPIS
LAKWYSPSHPLDPSIFHYLELFNSTTHNLTLKCNRKLIFHLVDELLVDILMKNNNFKHRS
MDGEELIDTLCSRIRSFPSANCQVLEDIDALIDKDMEIGASVFFEEQVESIVCEIEREIM
EEVVHDTV*

Transcript Sequence

Transcript ID

PGSC0003DMT400062317
Transcript Infomation

pacid=37459108 locus=PGSC0003DMG400024251 ID=PGSC0003DMT400062317.v4.03 annot-version=v4.03
Sequence

ATGGGTAGAGAGTGGTTATACTGGGGCAGTGGCAGTGGTACTAGTAATAAATCCAGTACT
CAAAGAGGAAGTAGAAGAAAAACAAAAGGAGAAGAAGTCATCAATAATATTATTAATGAA
GAAGCTACACCTCCTCCTGGTGGCTGCATGTGTTTCCAAATCTTCGATTTACCCCATTTT
CAAGTAGCTTTGAACCAACAATCTCGCTCTCTCAAGCAACATCATCATCATCATCCTTCT
TTCTTTCAACAACACAAAGAACCTTCTCTCCTCAAAGGAGTTGAAGCACCAAGAAACAGC
TTGGAATTAGATGAGCCTGTTCCAGAACGGAAATCAGTATCAAGTTCATTGTCGTCTTCA
TCAACCATGAAAGTAGACGAACAAAATTTGAATATCCCGGTAGGTATTCAAATCAGAACA
AGCTGTGATTCGAGATCACCGCGAGTGTCAACATCAGGCGGATCAAGAACAAGGACAGAT
CATGATATATCATCAGAATGTAGCAGCAGCTCACCAGCGGGGACCAAGACCCCAACTCTA
GTAGCTAGGCTAATGGGCCTTGATCTCATCCCTGAAAACAATAACTCTCCTCGCATTTCA
ATTTCAACTAATTGCAATACAAAGTCACAGTCAAAGAATGTGTTGGTTAACAATAATAAT
AGCAGTAAAAACAGAAGACGATTCAGTAGCTTTGAAAGTAGTGATACTAATTATATCACT
ACAGGTACTCTGTCACTACCAGAGACGCCCAGAATATCTTTAGCCAGAAGGTCAGATGTA
GATCATCATCAACGCCACCAGCATCACAGGTTATCTCTTCAAATTAACAAAGAGAACATG
GGTGATGCATTTGAATTTTCAGATTCTTCTTCTACTACCAGTGTCAGTAGGAAAATGGCG
AGGAACAATAGGATGAGTTTTTATCAACAAGAAAATGATAACCAAACGAGAAGTCCAGGG
TACTATGCTAGGCAGATTGTGAAGCAAGTGAAAGAAAGCGTCAGCAGAAAAGTTGGTCAT
GACATTACCAACACTGCTAGTACTAGTATCAGGAGAAAAGATGATCAATTAGCTGCTAAA
TATGATCAAGTTGTGTTGCTCAAACCAAAAAAAGCATCAAATGGAAATGACGATGATTTT
AGACCAAGCAAACAAACAACTCCTTCTTGCTCACCTAGGTTCAGATTTTTGGAGCCCAAG
AGTACTGGTACTAAACATCAAACCTCTCATTCACCCAAATTTTCACCATTATCTCCGCTT
TCAGAGACTACCACTTTATTATTACCAGCAAAAATTGTCACTAAGCCTAAGCCTCAAAGT
TCGCCGAAAGATCAAGTGCAACAAAGAAAAGGTGACAAATTTGTTCCAAAGAAGCCACCG
CAAGCTTGTGATGCTATTCGGAGCAAGAAGGAAGAGCTATTTGTTCGTTCAGCAGCAGCA
ACAAATAAAGCAAATTTTGCGGAGAAGAAATGCAAGCTGAAAACTCCATTGTCAAATCAA
CTTGTTAACACCAGTACTGTTCCAACTATTTTGCCATTAAGGAAAGACCCGTCTCCTCCA
ACCACCAAGTTACTCATTAAGCAGTCTCAGGAATCAGATACTTATCCATCGAAAAGGAGC
AGCAGAGAGTTATCTAGTAGTTCGAGCCATAATAATTCGTACTACTACAAACTCACCACA
CTCCAAGAAAACCGCGACAAATGTAACGGTGTCATTTCCATTGATGGACTCAATTTTCAT
CATCAGTACATTCAGAGAATACTAAAACGTACGGGTCTTGACAAAACTACTCCAATCTCC
TTAGCCAAATGGTACTCTCCTTCTCACCCACTTGACCCCTCCATTTTTCACTACTTAGAA
CTTTTCAATTCTACCACACATAATTTAACCCTCAAATGCAATCGAAAGTTAATTTTCCAT
CTTGTCGACGAGCTACTGGTCGATATCTTGATGAAAAATAACAATTTCAAGCATCGATCG
ATGGATGGGGAGGAATTGATTGACACATTGTGCTCGAGAATACGAAGTTTTCCTTCAGCT
AATTGTCAAGTTCTTGAAGATATTGATGCATTGATAGACAAAGATATGGAAATTGGTGCA
AGTGTATTTTTTGAGGAACAAGTGGAAAGTATAGTGTGTGAGATTGAACGTGAGATTATG
GAAGAAGTGGTGCATGATACTGTGTGA