Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062314
CDS Infomation

pacid=37459252 polypeptide=PGSC0003DMP400041949 locus=PGSC0003DMG400024249 ID=PGSC0003DMT400062314.v4.03 annot-version=v4.03
Sequence

ATGGCTATTGATTGTATGATCACAAATGCAAAATCTCCAATGATAGATGAAACAAAACAA
TTTATTTTTGATGCATCGCATATGAAACGTGAGTCTAATATTCCCACACAATTCATATGG
CCCGACCACGAGAAGCCTTGTGCCGTAGTACAAGAACTTCACGTACCCCTTATTGACTTA
AGGGGTTTTCTTTCTGGTGACTCTGACGCGGCCCAACAAGCATCTAAGCTTGTTGGAGAA
GCGTGTCGGAGTCATGGCTTTTTTCTTGTGGTGAACCATGGAGTTGATGCTAATCTTATT
TCTAATGCTCATCGTTATATGGATACGTTCTTTGACTTGCCGCTTTTGGAAAAGCAAAAG
GCTCAGAGGAAAATTGGTGAGCATTGTGGTTATGCTAGTAGCTTTACTGGAAGGTTTTCG
TCAAAGCTACCTTGGAAAGAGACACTCTCTTTTCGTTACTCTGCTGAAGAAGAATCATCT
CACATAGTTGAAGAGTATTTTCAAAGGACATTGGGTGAAAGTTTTAACCATCTTGGGAAT
GTTTATCAAGAATATTGCAATTCCATGAACACACTTTCTCTTGGGATCATGGAACTCTTA
GGGATGAGCCTAGGCGTAGAGAAGAGCCACTTCAAAGAATTTTTCGAAGAAAATGATTCG
ATAATGAGACTCAACTACTATCCACCATGTCAGAAACCGGAGCTCACCTTAGGAACGGGG
CCTCATTGTGACCCAACATCATTAACAATTCTCCATCAAGATTGTGTTGGCGGACTTCAA
GTTTTTGTGGACGATGAATGGCGTTCCATCAGTCCAAATTTCAATGCATTTGTGGTTAAC
ATAGGCGACACATTTATGGCGCTATCAAATGGAAGATACAAAAGTTGCCTGCACAGAGCA
GTAGTAAACAACAAGACTCCTAGGAAATCACTAGCTTTCTTTCTTTGTCCAAACAAAGAT
AAGGTGGTGAGCCCACCAAATGAATTGGTGGACTCCAACAACCCTCGAATATATCCTGAT
TTCACATGGCCTACTCTCCTTGAATTTACTCAAAAACATTATAGAGCTGATATGAACACT
CTTCAAACATTCTCAAATTGGCTTCATGATCAACACAATACTACAACACAAGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400041949
PEP Infomation

pacid=37459252 transcript=PGSC0003DMT400062314 locus=PGSC0003DMG400024249 ID=PGSC0003DMT400062314.v4.03 annot-version=v4.03
Sequence

MAIDCMITNAKSPMIDETKQFIFDASHMKRESNIPTQFIWPDHEKPCAVVQELHVPLIDL
RGFLSGDSDAAQQASKLVGEACRSHGFFLVVNHGVDANLISNAHRYMDTFFDLPLLEKQK
AQRKIGEHCGYASSFTGRFSSKLPWKETLSFRYSAEEESSHIVEEYFQRTLGESFNHLGN
VYQEYCNSMNTLSLGIMELLGMSLGVEKSHFKEFFEENDSIMRLNYYPPCQKPELTLGTG
PHCDPTSLTILHQDCVGGLQVFVDDEWRSISPNFNAFVVNIGDTFMALSNGRYKSCLHRA
VVNNKTPRKSLAFFLCPNKDKVVSPPNELVDSNNPRIYPDFTWPTLLEFTQKHYRADMNT
LQTFSNWLHDQHNTTTQV*

Transcript Sequence

Transcript ID

PGSC0003DMT400062314
Transcript Infomation

pacid=37459252 locus=PGSC0003DMG400024249 ID=PGSC0003DMT400062314.v4.03 annot-version=v4.03
Sequence

ATGGCTATTGATTGTATGATCACAAATGCAAAATCTCCAATGATAGATGAAACAAAACAA
TTTATTTTTGATGCATCGCATATGAAACGTGAGTCTAATATTCCCACACAATTCATATGG
CCCGACCACGAGAAGCCTTGTGCCGTAGTACAAGAACTTCACGTACCCCTTATTGACTTA
AGGGGTTTTCTTTCTGGTGACTCTGACGCGGCCCAACAAGCATCTAAGCTTGTTGGAGAA
GCGTGTCGGAGTCATGGCTTTTTTCTTGTGGTGAACCATGGAGTTGATGCTAATCTTATT
TCTAATGCTCATCGTTATATGGATACGTTCTTTGACTTGCCGCTTTTGGAAAAGCAAAAG
GCTCAGAGGAAAATTGGTGAGCATTGTGGTTATGCTAGTAGCTTTACTGGAAGGTTTTCG
TCAAAGCTACCTTGGAAAGAGACACTCTCTTTTCGTTACTCTGCTGAAGAAGAATCATCT
CACATAGTTGAAGAGTATTTTCAAAGGACATTGGGTGAAAGTTTTAACCATCTTGGGAAT
GTTTATCAAGAATATTGCAATTCCATGAACACACTTTCTCTTGGGATCATGGAACTCTTA
GGGATGAGCCTAGGCGTAGAGAAGAGCCACTTCAAAGAATTTTTCGAAGAAAATGATTCG
ATAATGAGACTCAACTACTATCCACCATGTCAGAAACCGGAGCTCACCTTAGGAACGGGG
CCTCATTGTGACCCAACATCATTAACAATTCTCCATCAAGATTGTGTTGGCGGACTTCAA
GTTTTTGTGGACGATGAATGGCGTTCCATCAGTCCAAATTTCAATGCATTTGTGGTTAAC
ATAGGCGACACATTTATGGCGCTATCAAATGGAAGATACAAAAGTTGCCTGCACAGAGCA
GTAGTAAACAACAAGACTCCTAGGAAATCACTAGCTTTCTTTCTTTGTCCAAACAAAGAT
AAGGTGGTGAGCCCACCAAATGAATTGGTGGACTCCAACAACCCTCGAATATATCCTGAT
TTCACATGGCCTACTCTCCTTGAATTTACTCAAAAACATTATAGAGCTGATATGAACACT
CTTCAAACATTCTCAAATTGGCTTCATGATCAACACAATACTACAACACAAGTTTAA