Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062276
CDS Infomation

pacid=37474261 polypeptide=PGSC0003DMP400041928 locus=PGSC0003DMG400024234 ID=PGSC0003DMT400062276.v4.03 annot-version=v4.03
Sequence

ATGGCTGATGCCTTTCTGTCATTTGCACTTCGAAAATTGGGTGATTTCCTCAGTCAACAA
GTTTCCCTGCTTACAAGTCTCAGAGATGAAATCAAATGGCTGAGAAATGAGCTACTCTTC
ATACAACCTTTCCTCAAAGATGCAGAACTAAAGCAATGTGGAGATCAAAGAGTTGTACAA
TGGGTGTTTGAGATCAACTCTATTGCTAATGATGTTGTTGCTATACTCGAGACTTACACC
TTTGAGGCTGATAAACGTGCTAGTTGTCTCAAGGCTTGTGCTTGCATATGTAGGAAGGAG
AAGAAATTATACAATGTCGCCAAGGATATCAAATCACTCAAGAAACGAATCATGGATATC
TCTCGCAAACGAGAGACTTATGGTATTACAACTACTTCGCATAAAAAGGGGCTAAACGAA
TGGCAAAAGGTGAAAGATCACCTTTGGAAGAACATTAAAGAAGATAAATCTATTGAAATC
TCTAACATACTATCATTAAGCTACAATGATTTGCCAGCTGCGCTCAAGCAGTGTTTTCTT
TACTTTGGTATTTTTCCAGAAGATCAAGTGTTCGAGGCTGATAACATAATACGATTGTGG
ATGGCCGAGGGTTTCATACCCAGAGGAGAAGAAAGAATGGAGGATACCGCTGAAGGCTTC
TTGAATGAGCTGATAAGACGAAGCTTGGTTCAAGTGGCTAAAACATTTTGGGAAAGAGTT
ACTGAATGTAAGGTTCATGATTTACTCCATGATCTTGTGATACAAAAGGCATTGGAGGTG
AACTTCTTTGACATTTATGATCCAAAAAGCCACTCTATATCCTCTTTATGTATCAAACAT
GTCATTCATAGTCAAGGAGAAAGGTACCCCTCACTTGATCTTTCTAACTTAAAGTTGAGG
TCACTTATGTCCTTCGATCCAGATTTTCGTAAGATGAGTCTTATAAACTTCAGGAGTGTG
TTCCAACATCTATATGTGTTGTACTTGGAGATGCGAGTTGACAATATGTCTATTGTATTA
GTACCTGATGCCATAGGAAGTTTGTACCACCTCAAGTTCTTAAGCTTGAGAGGTATCGAT
GACCTTCCGTCTTCCATTGGCAACCTCAAGAATCTACAGACACTTGTTGTCAATGAGGGC
AAATACACTTGCCAACTACCCCGCGAGACAGCTGACCTAATAAATTTAAGACATTTAGTT
GCTCGGTATTCAAAACCTCTGGTACATATAAGCAAACTCACTAGTCTTCAAGTTGTTGAT
GGCATCCATTGTGATCAATGGAAAGATGTTGACCCTGTTGATTTAGTCAATCTTGGAGAA
TTAAGCATGCATCATATTAAGAAATCTTACTCCCTAAACAACATTAGCAGCTTGAAAAAC
CTTAGCATTCTCACATTGTTTTGTGAGTGTTATAAAACATTCCCATCCCTTGAATTTGTT
AATTGTTGTGAAAAGCTCCAGAAATTGAGGTTAAAAGGGGTGATAGAGAAACTGCCTGAT
CTGTTTCCAAATTCCATCACAATGATGGTTTTGAGGGACTCAAGATTGACAGAAGATCCG
ATGCCTATTTTGGGAACGTTGCCAAACCTAAGAAATCTCGAATTGATTATAGCTTATGAA
GGAAAAGAAATGATGTGCAGAGATAACAGCTTCAGTCAACTAGACTTCCTTATTCTTAAT
GATCTTTACTACCTAGAAAGATGGCATTTAGCCACAAATTCCATGCCTCTGATTAAAGGT
TTTGCTATTTATGATTGTCCAAACTTGAAGAAGATTCCAGAGAGATTGAAAGACGTGAAG
CAAAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400041928
PEP Infomation

pacid=37474261 transcript=PGSC0003DMT400062276 locus=PGSC0003DMG400024234 ID=PGSC0003DMT400062276.v4.03 annot-version=v4.03
Sequence

MADAFLSFALRKLGDFLSQQVSLLTSLRDEIKWLRNELLFIQPFLKDAELKQCGDQRVVQ
WVFEINSIANDVVAILETYTFEADKRASCLKACACICRKEKKLYNVAKDIKSLKKRIMDI
SRKRETYGITTTSHKKGLNEWQKVKDHLWKNIKEDKSIEISNILSLSYNDLPAALKQCFL
YFGIFPEDQVFEADNIIRLWMAEGFIPRGEERMEDTAEGFLNELIRRSLVQVAKTFWERV
TECKVHDLLHDLVIQKALEVNFFDIYDPKSHSISSLCIKHVIHSQGERYPSLDLSNLKLR
SLMSFDPDFRKMSLINFRSVFQHLYVLYLEMRVDNMSIVLVPDAIGSLYHLKFLSLRGID
DLPSSIGNLKNLQTLVVNEGKYTCQLPRETADLINLRHLVARYSKPLVHISKLTSLQVVD
GIHCDQWKDVDPVDLVNLGELSMHHIKKSYSLNNISSLKNLSILTLFCECYKTFPSLEFV
NCCEKLQKLRLKGVIEKLPDLFPNSITMMVLRDSRLTEDPMPILGTLPNLRNLELIIAYE
GKEMMCRDNSFSQLDFLILNDLYYLERWHLATNSMPLIKGFAIYDCPNLKKIPERLKDVK
QR*

Transcript Sequence

Transcript ID

PGSC0003DMT400062276
Transcript Infomation

pacid=37474261 locus=PGSC0003DMG400024234 ID=PGSC0003DMT400062276.v4.03 annot-version=v4.03
Sequence

ATGGCTGATGCCTTTCTGTCATTTGCACTTCGAAAATTGGGTGATTTCCTCAGTCAACAA
GTTTCCCTGCTTACAAGTCTCAGAGATGAAATCAAATGGCTGAGAAATGAGCTACTCTTC
ATACAACCTTTCCTCAAAGATGCAGAACTAAAGCAATGTGGAGATCAAAGAGTTGTACAA
TGGGTGTTTGAGATCAACTCTATTGCTAATGATGTTGTTGCTATACTCGAGACTTACACC
TTTGAGGCTGATAAACGTGCTAGTTGTCTCAAGGCTTGTGCTTGCATATGTAGGAAGGAG
AAGAAATTATACAATGTCGCCAAGGATATCAAATCACTCAAGAAACGAATCATGGATATC
TCTCGCAAACGAGAGACTTATGGTATTACAACTACTTCGCATAAAAAGGGGCTAAACGAA
TGGCAAAAGGTGAAAGATCACCTTTGGAAGAACATTAAAGAAGATAAATCTATTGAAATC
TCTAACATACTATCATTAAGCTACAATGATTTGCCAGCTGCGCTCAAGCAGTGTTTTCTT
TACTTTGGTATTTTTCCAGAAGATCAAGTGTTCGAGGCTGATAACATAATACGATTGTGG
ATGGCCGAGGGTTTCATACCCAGAGGAGAAGAAAGAATGGAGGATACCGCTGAAGGCTTC
TTGAATGAGCTGATAAGACGAAGCTTGGTTCAAGTGGCTAAAACATTTTGGGAAAGAGTT
ACTGAATGTAAGGTTCATGATTTACTCCATGATCTTGTGATACAAAAGGCATTGGAGGTG
AACTTCTTTGACATTTATGATCCAAAAAGCCACTCTATATCCTCTTTATGTATCAAACAT
GTCATTCATAGTCAAGGAGAAAGGTACCCCTCACTTGATCTTTCTAACTTAAAGTTGAGG
TCACTTATGTCCTTCGATCCAGATTTTCGTAAGATGAGTCTTATAAACTTCAGGAGTGTG
TTCCAACATCTATATGTGTTGTACTTGGAGATGCGAGTTGACAATATGTCTATTGTATTA
GTACCTGATGCCATAGGAAGTTTGTACCACCTCAAGTTCTTAAGCTTGAGAGGTATCGAT
GACCTTCCGTCTTCCATTGGCAACCTCAAGAATCTACAGACACTTGTTGTCAATGAGGGC
AAATACACTTGCCAACTACCCCGCGAGACAGCTGACCTAATAAATTTAAGACATTTAGTT
GCTCGGTATTCAAAACCTCTGGTACATATAAGCAAACTCACTAGTCTTCAAGTTGTTGAT
GGCATCCATTGTGATCAATGGAAAGATGTTGACCCTGTTGATTTAGTCAATCTTGGAGAA
TTAAGCATGCATCATATTAAGAAATCTTACTCCCTAAACAACATTAGCAGCTTGAAAAAC
CTTAGCATTCTCACATTGTTTTGTGAGTGTTATAAAACATTCCCATCCCTTGAATTTGTT
AATTGTTGTGAAAAGCTCCAGAAATTGAGGTTAAAAGGGGTGATAGAGAAACTGCCTGAT
CTGTTTCCAAATTCCATCACAATGATGGTTTTGAGGGACTCAAGATTGACAGAAGATCCG
ATGCCTATTTTGGGAACGTTGCCAAACCTAAGAAATCTCGAATTGATTATAGCTTATGAA
GGAAAAGAAATGATGTGCAGAGATAACAGCTTCAGTCAACTAGACTTCCTTATTCTTAAT
GATCTTTACTACCTAGAAAGATGGCATTTAGCCACAAATTCCATGCCTCTGATTAAAGGT
TTTGCTATTTATGATTGTCCAAACTTGAAGAAGATTCCAGAGAGATTGAAAGACGTGAAG
CAAAGATAA