Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062238
CDS Infomation

pacid=37469796 polypeptide=PGSC0003DMP400041892 locus=PGSC0003DMG400024220 ID=PGSC0003DMT400062238.v4.03 annot-version=v4.03
Sequence

ATGGCGACATTGAATTTGCATACAGGAGGACTACACGCCGCATTGAAATCCGACGCGGCG
GCTAAATCAGCCGCGTCGTTGGATCGGCTTTCATCGGCAAAGAACATCGGTGATTTGTTC
TTCTCCGATTTACGTTTCCACCGGAAACGAGTGAACGGTTTGAGTCAAATCGTGGCTGTT
AAATCACCTGACCATATTCGTGGTGCTAATAACAATGTTCATGCTAGTTATGATGATGAT
GATAACAGTAATTTCAATGTACCTCTTACGTCATCTTCCAGTCCTTACAGTCTGGGAAAG
GAAAGTGTGTATCTGAACTCTCCAAGAAAAACCAAGATAGTTTGCACAATTGGTCCCTCT
ACAAGCTCAAAGGAGATGATCTGGAAATTGGCAGAAGCTGGAATGAACGTGGCACGTATG
AATATGTCACACGGAGACCATGCATCACATCAGAAAACAATTGACCTTGTTAAAGAATAC
AATGCTCAATTTGAGAACAAGGTTATAGCAATAATGTTGGACACTAAGGGACCTGAGGTG
AGAAGTGGAGATGTGCCACAACCCATACTCCTTAAGGAGGGTCAAGAATTCAACTTTACC
ATTAAAAGAGGAGTCATCACAGAAGACACTGTTAGTGTAAATTATGACGATTTCATAAAT
GATGTGGAGTTGGGTGACACACTACTCGTTGACGGTGGGATGATGTCATTAGTTGTGAAG
TCAAAAACCAGCGATGTAGTGAAATGTGAAGTTATTGATGGGGGAGAACTGAAATCAAGA
CGGCATCTAAACGTAAGAGGAAAAAGTGCCACCCTACCTTCAATAACAGAGAAAGATTGG
GATGATATTAAGTTTGGCGTGGACAATCAAGTTGACTTCTATGCTGTTTCCTTTGTGAAG
GATGCAAAGGTGGTCCATGAATTGAAAGATTACCTTAAAAGTTGTAATGCAGATATTCAT
GTTATTGTAAAGATTGAAAGTGCAGACTCCATCCCAAATCTCCACTCGATCTTAACTGCA
TCTGATGGGGCAATGGTGGCCCGTGGTGATCTTGGAGCTGAGCTTCCAATCGAGGAAGTC
CCACTGCTGCAGGAAGACATTATTAGAAGGTGTCGGAGCATGCAAAAACCTGTTATAGTA
GCCACAAACATGCTTGAAAGCATGATAGATCACCCAACCCCAACCAGGGCAGAAGTCTCA
GACATTTCTATTGCAGTACGTGAAGGTGCTGATGCTGTAATGCTTTCAGGGGAAACCGCT
CATGGGAAGTACCCGTTGAAGGCAGTTCACGTGATGCATGTTGTTGCATTAAGGACTGAG
TCAAGCCTACAAAACAGTACTAGTTCTCCAAGTCAATCTGTCGCCCATAAGGGCCATATG
GGTGAAATGTTTGCCTTCCACTCTTCCACAATGGCTGATACCCTTAGCACTCCCCTCATT
GTCTTCACAAGAACTGGGTCCATGGCAATAATTTTAAGTCATAATCGGCCTTCATCAACA
ATATTTGCTTTCACGAACAATGAAAGGGTGAAGCAGCGTCTTGCTCTGTTTCATGGTGTC
GTCCCTATATATATGGAGTTTTCAGAAGATGCAGAGGAGACCTTTTCCCGAGCTATCAAG
CTTTTAGTGAACAAAAGCTCGGTGAAGGATGGGCAATATGTCACTCTTGTCCAAAGTGGA
GCACAACCTATCTGGCGTAGGCATTCTACTCACCACATACAAGTCCGTAAGGTCCAAAGT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400041892
PEP Infomation

pacid=37469796 transcript=PGSC0003DMT400062238 locus=PGSC0003DMG400024220 ID=PGSC0003DMT400062238.v4.03 annot-version=v4.03
Sequence

MATLNLHTGGLHAALKSDAAAKSAASLDRLSSAKNIGDLFFSDLRFHRKRVNGLSQIVAV
KSPDHIRGANNNVHASYDDDDNSNFNVPLTSSSSPYSLGKESVYLNSPRKTKIVCTIGPS
TSSKEMIWKLAEAGMNVARMNMSHGDHASHQKTIDLVKEYNAQFENKVIAIMLDTKGPEV
RSGDVPQPILLKEGQEFNFTIKRGVITEDTVSVNYDDFINDVELGDTLLVDGGMMSLVVK
SKTSDVVKCEVIDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVK
DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSILTASDGAMVARGDLGAELPIEEV
PLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDISIAVREGADAVMLSGETA
HGKYPLKAVHVMHVVALRTESSLQNSTSSPSQSVAHKGHMGEMFAFHSSTMADTLSTPLI
VFTRTGSMAIILSHNRPSSTIFAFTNNERVKQRLALFHGVVPIYMEFSEDAEETFSRAIK
LLVNKSSVKDGQYVTLVQSGAQPIWRRHSTHHIQVRKVQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400062238
Transcript Infomation

pacid=37469796 locus=PGSC0003DMG400024220 ID=PGSC0003DMT400062238.v4.03 annot-version=v4.03
Sequence

ATGGCGACATTGAATTTGCATACAGGAGGACTACACGCCGCATTGAAATCCGACGCGGCG
GCTAAATCAGCCGCGTCGTTGGATCGGCTTTCATCGGCAAAGAACATCGGTGATTTGTTC
TTCTCCGATTTACGTTTCCACCGGAAACGAGTGAACGGTTTGAGTCAAATCGTGGCTGTT
AAATCACCTGACCATATTCGTGGTGCTAATAACAATGTTCATGCTAGTTATGATGATGAT
GATAACAGTAATTTCAATGTACCTCTTACGTCATCTTCCAGTCCTTACAGTCTGGGAAAG
GAAAGTGTGTATCTGAACTCTCCAAGAAAAACCAAGATAGTTTGCACAATTGGTCCCTCT
ACAAGCTCAAAGGAGATGATCTGGAAATTGGCAGAAGCTGGAATGAACGTGGCACGTATG
AATATGTCACACGGAGACCATGCATCACATCAGAAAACAATTGACCTTGTTAAAGAATAC
AATGCTCAATTTGAGAACAAGGTTATAGCAATAATGTTGGACACTAAGGGACCTGAGGTG
AGAAGTGGAGATGTGCCACAACCCATACTCCTTAAGGAGGGTCAAGAATTCAACTTTACC
ATTAAAAGAGGAGTCATCACAGAAGACACTGTTAGTGTAAATTATGACGATTTCATAAAT
GATGTGGAGTTGGGTGACACACTACTCGTTGACGGTGGGATGATGTCATTAGTTGTGAAG
TCAAAAACCAGCGATGTAGTGAAATGTGAAGTTATTGATGGGGGAGAACTGAAATCAAGA
CGGCATCTAAACGTAAGAGGAAAAAGTGCCACCCTACCTTCAATAACAGAGAAAGATTGG
GATGATATTAAGTTTGGCGTGGACAATCAAGTTGACTTCTATGCTGTTTCCTTTGTGAAG
GATGCAAAGGTGGTCCATGAATTGAAAGATTACCTTAAAAGTTGTAATGCAGATATTCAT
GTTATTGTAAAGATTGAAAGTGCAGACTCCATCCCAAATCTCCACTCGATCTTAACTGCA
TCTGATGGGGCAATGGTGGCCCGTGGTGATCTTGGAGCTGAGCTTCCAATCGAGGAAGTC
CCACTGCTGCAGGAAGACATTATTAGAAGGTGTCGGAGCATGCAAAAACCTGTTATAGTA
GCCACAAACATGCTTGAAAGCATGATAGATCACCCAACCCCAACCAGGGCAGAAGTCTCA
GACATTTCTATTGCAGTACGTGAAGGTGCTGATGCTGTAATGCTTTCAGGGGAAACCGCT
CATGGGAAGTACCCGTTGAAGGCAGTTCACGTGATGCATGTTGTTGCATTAAGGACTGAG
TCAAGCCTACAAAACAGTACTAGTTCTCCAAGTCAATCTGTCGCCCATAAGGGCCATATG
GGTGAAATGTTTGCCTTCCACTCTTCCACAATGGCTGATACCCTTAGCACTCCCCTCATT
GTCTTCACAAGAACTGGGTCCATGGCAATAATTTTAAGTCATAATCGGCCTTCATCAACA
ATATTTGCTTTCACGAACAATGAAAGGGTGAAGCAGCGTCTTGCTCTGTTTCATGGTGTC
GTCCCTATATATATGGAGTTTTCAGAAGATGCAGAGGAGACCTTTTCCCGAGCTATCAAG
CTTTTAGTGAACAAAAGCTCGGTGAAGGATGGGCAATATGTCACTCTTGTCCAAAGTGGA
GCACAACCTATCTGGCGTAGGCATTCTACTCACCACATACAAGTCCGTAAGGTCCAAAGT
TGA