Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062232
CDS Infomation

pacid=37470581 polypeptide=PGSC0003DMP400041887 locus=PGSC0003DMG400024217 ID=PGSC0003DMT400062232.v4.03 annot-version=v4.03
Sequence

ATGATTTGCATTGAGAATGAATTATTGGGTTGGAATGATTTCCCAAAGGGGCTTAAAGTC
CTACTTCTTGATGAAGACAGCAACTCTGCTGCTGAGATGAAATCAAGGCTTGAGAAAATG
GACTACATAGTCTACTCGTTCTGCAACGAGAGCGAAGCTTTGACTGCAATCTCGAGCAAA
TCCGAGGGCTTTCATGTTGCCATTGTGGAGGTAAGTGCAGGCAACAGTGATGGGGTTCTC
CGATTTCTTGAAAGTGCCAAAGATCTACCTACTATAATGACATCAAATATTCATTCTCTG
AGTACAATGATGAAGTGTATTGCGCTAGGTGCAGTTGAGTTCCTTCAGAAACCATTGTCA
GATGATAAACTCAAAAATATATGGCAGCATGTAGTTCACAAGGCATTCAATGCTAGAAAG
GATGTGTCCAAATCACTTGAGCCGGTAAAAGAATCTCTCCTCTCAATGCTGCAGTTACAA
CCAGCAAAGAGTGAAGCAGATGACAAAAGTTCAAATGGAACAGAACCTCTCACTGCAGTA
GCAGAAAGCAATATCGAACAGTCATCGGGCAGTGATAAATACCCTGCTCCCTCAACCCCA
CAATTGAAACAAGGAGTGCGGTCAGTCGATGATGGTGACTTCCATGATCATACTATCTTC
TCAACTGACCAAGACAGTGGGGAACATGATGGTGACACTAAATCCGTCGAAACTACTTAT
AACAATTCACTTGCTGAGAATAATGTCCAAACAAGTCCTACTGTGCAACAAGGAGAGATT
ATTTTGAAAGAGGATAATGTTTCATCTCCTGATCAAAAGACAGAGACAGATATTGCTACC
TCTTCACAAAGTAATGACTGCCCTGACAAAATCATTAGTCATTTTGCTGAACCTAGTAAA
GCATCTGGTCCTCATAGTTCAAATGGGACTAAATCCAATAAGAAGAAGATGAAGGTAGAT
TGGACACCTGAACTACACAAGAAGTTTGTTCAAGCAGTAGAGCAACTCGGTATAGATCAA
GCCATTCCTTCTCGAATACTGGACCTGATGAAAGTAGAGGGCTTAACGAGACATAACGTA
GCTAGCCATCTCCAGAAATACAGAATGCATCGAAGGCAAATTTTGCCAAAGGAAGTAGAA
AGAAGATGGCCTCATCCGCAACCTATAGATTCAGTACAAAGAAGTTACTATCCTCATAAA
CCTATCATGACATTGCCACCATATCATTCTAATCATGTTGCCCCGGGTGGTCAATTTTAT
CCTGCTTGGGTACCACCAGCAAGTTATCCGAACGGTTTACAAGTGTGGGGTTCACCTTAC
TATCCGGGATGGAAGCCTGCAGAGACTTGGCACTGGACGCCTCGTCCAGAGCTGCATGCT
GATACATGGGGCTCCCCTGTCATGTCACCGCAGTTTGGATCATATCCACCATATCCTCAG
AATGCTGGAGTGTATCGGCCTCACGGAATGCATAACAGATATAGCATGCTAGAGAAGTCG
TTTGATCTTCACCCGGCGGATGAGGTGATTGATAAAGTAATAAAGGAGGCAATAACCAAA
CCATGGTTACCACTTCCTTTGGGCCTAAAACCTCCTTCCACGGAGGGCGTTCTTGACGAA
CTTTCTAGACGAGGGATCTCAACCATCCCTTCACAAATCAACGGCTCCCGTTATCGAAGA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400041887
PEP Infomation

pacid=37470581 transcript=PGSC0003DMT400062232 locus=PGSC0003DMG400024217 ID=PGSC0003DMT400062232.v4.03 annot-version=v4.03
Sequence

MICIENELLGWNDFPKGLKVLLLDEDSNSAAEMKSRLEKMDYIVYSFCNESEALTAISSK
SEGFHVAIVEVSAGNSDGVLRFLESAKDLPTIMTSNIHSLSTMMKCIALGAVEFLQKPLS
DDKLKNIWQHVVHKAFNARKDVSKSLEPVKESLLSMLQLQPAKSEADDKSSNGTEPLTAV
AESNIEQSSGSDKYPAPSTPQLKQGVRSVDDGDFHDHTIFSTDQDSGEHDGDTKSVETTY
NNSLAENNVQTSPTVQQGEIILKEDNVSSPDQKTETDIATSSQSNDCPDKIISHFAEPSK
ASGPHSSNGTKSNKKKMKVDWTPELHKKFVQAVEQLGIDQAIPSRILDLMKVEGLTRHNV
ASHLQKYRMHRRQILPKEVERRWPHPQPIDSVQRSYYPHKPIMTLPPYHSNHVAPGGQFY
PAWVPPASYPNGLQVWGSPYYPGWKPAETWHWTPRPELHADTWGSPVMSPQFGSYPPYPQ
NAGVYRPHGMHNRYSMLEKSFDLHPADEVIDKVIKEAITKPWLPLPLGLKPPSTEGVLDE
LSRRGISTIPSQINGSRYRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400062232
Transcript Infomation

pacid=37470581 locus=PGSC0003DMG400024217 ID=PGSC0003DMT400062232.v4.03 annot-version=v4.03
Sequence

ATGATTTGCATTGAGAATGAATTATTGGGTTGGAATGATTTCCCAAAGGGGCTTAAAGTC
CTACTTCTTGATGAAGACAGCAACTCTGCTGCTGAGATGAAATCAAGGCTTGAGAAAATG
GACTACATAGTCTACTCGTTCTGCAACGAGAGCGAAGCTTTGACTGCAATCTCGAGCAAA
TCCGAGGGCTTTCATGTTGCCATTGTGGAGGTAAGTGCAGGCAACAGTGATGGGGTTCTC
CGATTTCTTGAAAGTGCCAAAGATCTACCTACTATAATGACATCAAATATTCATTCTCTG
AGTACAATGATGAAGTGTATTGCGCTAGGTGCAGTTGAGTTCCTTCAGAAACCATTGTCA
GATGATAAACTCAAAAATATATGGCAGCATGTAGTTCACAAGGCATTCAATGCTAGAAAG
GATGTGTCCAAATCACTTGAGCCGGTAAAAGAATCTCTCCTCTCAATGCTGCAGTTACAA
CCAGCAAAGAGTGAAGCAGATGACAAAAGTTCAAATGGAACAGAACCTCTCACTGCAGTA
GCAGAAAGCAATATCGAACAGTCATCGGGCAGTGATAAATACCCTGCTCCCTCAACCCCA
CAATTGAAACAAGGAGTGCGGTCAGTCGATGATGGTGACTTCCATGATCATACTATCTTC
TCAACTGACCAAGACAGTGGGGAACATGATGGTGACACTAAATCCGTCGAAACTACTTAT
AACAATTCACTTGCTGAGAATAATGTCCAAACAAGTCCTACTGTGCAACAAGGAGAGATT
ATTTTGAAAGAGGATAATGTTTCATCTCCTGATCAAAAGACAGAGACAGATATTGCTACC
TCTTCACAAAGTAATGACTGCCCTGACAAAATCATTAGTCATTTTGCTGAACCTAGTAAA
GCATCTGGTCCTCATAGTTCAAATGGGACTAAATCCAATAAGAAGAAGATGAAGGTAGAT
TGGACACCTGAACTACACAAGAAGTTTGTTCAAGCAGTAGAGCAACTCGGTATAGATCAA
GCCATTCCTTCTCGAATACTGGACCTGATGAAAGTAGAGGGCTTAACGAGACATAACGTA
GCTAGCCATCTCCAGAAATACAGAATGCATCGAAGGCAAATTTTGCCAAAGGAAGTAGAA
AGAAGATGGCCTCATCCGCAACCTATAGATTCAGTACAAAGAAGTTACTATCCTCATAAA
CCTATCATGACATTGCCACCATATCATTCTAATCATGTTGCCCCGGGTGGTCAATTTTAT
CCTGCTTGGGTACCACCAGCAAGTTATCCGAACGGTTTACAAGTGTGGGGTTCACCTTAC
TATCCGGGATGGAAGCCTGCAGAGACTTGGCACTGGACGCCTCGTCCAGAGCTGCATGCT
GATACATGGGGCTCCCCTGTCATGTCACCGCAGTTTGGATCATATCCACCATATCCTCAG
AATGCTGGAGTGTATCGGCCTCACGGAATGCATAACAGATATAGCATGCTAGAGAAGTCG
TTTGATCTTCACCCGGCGGATGAGGTGATTGATAAAGTAATAAAGGAGGCAATAACCAAA
CCATGGTTACCACTTCCTTTGGGCCTAAAACCTCCTTCCACGGAGGGCGTTCTTGACGAA
CTTTCTAGACGAGGGATCTCAACCATCCCTTCACAAATCAACGGCTCCCGTTATCGAAGA
TGA