Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062230
CDS Infomation

pacid=37469368 polypeptide=PGSC0003DMP400041886 locus=PGSC0003DMG400024216 ID=PGSC0003DMT400062230.v4.03 annot-version=v4.03
Sequence

ATGGCATCCAAGTATCACGGACCAATCAACAGAACACGGAGACCGATCTCTATATTAATT
GTAATTGGTCTTTGCTGTTTCTGTTATCTAATAGGAATTTGGCAGAAAAGTGGATCCGGA
AAGGGAGATAAATTAGCACTACAAGTGACTGAGCAAACTGCTGACTGCAATGTTTTTCCA
CAAACCACTCTGGATTTTGAGTCCCACCATAATTATGTGGAAACGGTTGAAACTTCAGAA
CTAACAACTAAAAGATTCAAATCATGTGAAGCTAAATACACTGACTATACTCCCTGCCAT
GAACAAGACCGAGCTATGAAATTCCCACGGGAAGATATGATATATAGAGAAAGGCATTGC
CCTCCAGATGATGAAAAGCTTCGTTGTCTGATTCTAGCACCCAAAGGATACACAACTCCA
TTTCCATGGCCAAAAAGCCGTGATTATGCCTACTATGCTAATGTTCCTTACAAACACTTG
ACAGTTGAGAAGGCAGTCCAGAACTGGGTACAGTTTCAGGGAAACGTTTTCAAATTTCCA
GGAGGAGGTACAATGTTCCCTAGAGGAGCAGATGCATATATTGATGAACTTGCTTCCGTG
GTTCCAATTGGAAGTGGCATGATACGAACTGCTCTTGACACTGGTTGTGGGGTTGCTAGC
TGGGGTGCTTACTTGCTGAAGAGAAATATTCTGGCAATGTCATTTGCACCTAAGGACAAT
CATGAAGCACAAGTGCAATTTGCTTTGGAGCGAGGTGTACCTGCTGTTATTGGAGTTCTT
GGTTCCATAAGCCTTCCATACCCATCAAGATCATTTGACATGTCTCATTGTTCTCGGTGT
CTGATTCCCTGGGCATCAAAAGAGGGCATGTACATGATGGAAGTTGATCGAGTTCTGAGA
CCTGGTGGATACTGGATTCTGTCTGGTCCTCCACTCAATTGGAAGACCTATCACAGAGTC
TGGAACAGGACCAAGGAGAATTGTAGAGCCGAGCAAAGAAGGATTGAAGAGTATGCTGAG
CTTCTTTGCTGGGAGAAGAAATACGAAAAAGGTGATGTAGCTATATGGAGGAAAAACATA
AATGGAAAATCATGCAGAAGAACATCCGCCAACATATGTCAAACAAAGGATGCTGATAAT
GTCTGGTATAAGAAAATGGATGCATGCATAACCCCCTACCCTGACGTCAAGAATTCTGAT
GAAGTAGCTGGAGGAGAATTGAAGAAGTTTCCTGCTAGGCTTTTTGCAGTTCCCCCACGT
ATAGCCAATGAAATGGTTCCTGGGGTAACAGTTGAGTCTTATCAAGAGGATAATAAGCTT
TGGAAGAAACACGTCACTTCTTACAAGAGGAGCATTAGCCTACTTGGCACCACTAGATAC
CACAACATAATGGACATGAATGCCGGACTTGGAGGATTTGCAGCAGCACTAGACTCTCCT
AAACTGTGGGTGATGAATGTTGTGCCAACTATTGCTGAAAACACTCTTGGTGTCGTATAC
GAAAGGGGCTTAATTGGCATATACCATGACTGGTGTGAAGGCTTCTCTACATACCCGAGA
ACGTATGACCTTCTTCATGCTAATCGCTTGTTCACTCTGTACCAGGACAAGTGTGAATTT
GAAGATATTCTCCTAGAAATGGACCGTGTTCTGCGTCCTGAAGGTGCGGTCATTCTTCGA
GATGGAGTTGAAGTCTTGAACAAGGTTAGGAAAATCGCCGCGGGCCTGAGATGGGACACT
AAATTATTAGATCATGAAGATGGACCCTTGGTGCCTGAGAAAATCTTTGTTGCTGTCAAA
CAATATGTTGTTGAAGGTGATGAAGAACAAAGCACGCCAAACGTCGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400041886
PEP Infomation

pacid=37469368 transcript=PGSC0003DMT400062230 locus=PGSC0003DMG400024216 ID=PGSC0003DMT400062230.v4.03 annot-version=v4.03
Sequence

MASKYHGPINRTRRPISILIVIGLCCFCYLIGIWQKSGSGKGDKLALQVTEQTADCNVFP
QTTLDFESHHNYVETVETSELTTKRFKSCEAKYTDYTPCHEQDRAMKFPREDMIYRERHC
PPDDEKLRCLILAPKGYTTPFPWPKSRDYAYYANVPYKHLTVEKAVQNWVQFQGNVFKFP
GGGTMFPRGADAYIDELASVVPIGSGMIRTALDTGCGVASWGAYLLKRNILAMSFAPKDN
HEAQVQFALERGVPAVIGVLGSISLPYPSRSFDMSHCSRCLIPWASKEGMYMMEVDRVLR
PGGYWILSGPPLNWKTYHRVWNRTKENCRAEQRRIEEYAELLCWEKKYEKGDVAIWRKNI
NGKSCRRTSANICQTKDADNVWYKKMDACITPYPDVKNSDEVAGGELKKFPARLFAVPPR
IANEMVPGVTVESYQEDNKLWKKHVTSYKRSISLLGTTRYHNIMDMNAGLGGFAAALDSP
KLWVMNVVPTIAENTLGVVYERGLIGIYHDWCEGFSTYPRTYDLLHANRLFTLYQDKCEF
EDILLEMDRVLRPEGAVILRDGVEVLNKVRKIAAGLRWDTKLLDHEDGPLVPEKIFVAVK
QYVVEGDEEQSTPNVD*

Transcript Sequence

Transcript ID

PGSC0003DMT400062230
Transcript Infomation

pacid=37469368 locus=PGSC0003DMG400024216 ID=PGSC0003DMT400062230.v4.03 annot-version=v4.03
Sequence

ATGGCATCCAAGTATCACGGACCAATCAACAGAACACGGAGACCGATCTCTATATTAATT
GTAATTGGTCTTTGCTGTTTCTGTTATCTAATAGGAATTTGGCAGAAAAGTGGATCCGGA
AAGGGAGATAAATTAGCACTACAAGTGACTGAGCAAACTGCTGACTGCAATGTTTTTCCA
CAAACCACTCTGGATTTTGAGTCCCACCATAATTATGTGGAAACGGTTGAAACTTCAGAA
CTAACAACTAAAAGATTCAAATCATGTGAAGCTAAATACACTGACTATACTCCCTGCCAT
GAACAAGACCGAGCTATGAAATTCCCACGGGAAGATATGATATATAGAGAAAGGCATTGC
CCTCCAGATGATGAAAAGCTTCGTTGTCTGATTCTAGCACCCAAAGGATACACAACTCCA
TTTCCATGGCCAAAAAGCCGTGATTATGCCTACTATGCTAATGTTCCTTACAAACACTTG
ACAGTTGAGAAGGCAGTCCAGAACTGGGTACAGTTTCAGGGAAACGTTTTCAAATTTCCA
GGAGGAGGTACAATGTTCCCTAGAGGAGCAGATGCATATATTGATGAACTTGCTTCCGTG
GTTCCAATTGGAAGTGGCATGATACGAACTGCTCTTGACACTGGTTGTGGGGTTGCTAGC
TGGGGTGCTTACTTGCTGAAGAGAAATATTCTGGCAATGTCATTTGCACCTAAGGACAAT
CATGAAGCACAAGTGCAATTTGCTTTGGAGCGAGGTGTACCTGCTGTTATTGGAGTTCTT
GGTTCCATAAGCCTTCCATACCCATCAAGATCATTTGACATGTCTCATTGTTCTCGGTGT
CTGATTCCCTGGGCATCAAAAGAGGGCATGTACATGATGGAAGTTGATCGAGTTCTGAGA
CCTGGTGGATACTGGATTCTGTCTGGTCCTCCACTCAATTGGAAGACCTATCACAGAGTC
TGGAACAGGACCAAGGAGAATTGTAGAGCCGAGCAAAGAAGGATTGAAGAGTATGCTGAG
CTTCTTTGCTGGGAGAAGAAATACGAAAAAGGTGATGTAGCTATATGGAGGAAAAACATA
AATGGAAAATCATGCAGAAGAACATCCGCCAACATATGTCAAACAAAGGATGCTGATAAT
GTCTGGTATAAGAAAATGGATGCATGCATAACCCCCTACCCTGACGTCAAGAATTCTGAT
GAAGTAGCTGGAGGAGAATTGAAGAAGTTTCCTGCTAGGCTTTTTGCAGTTCCCCCACGT
ATAGCCAATGAAATGGTTCCTGGGGTAACAGTTGAGTCTTATCAAGAGGATAATAAGCTT
TGGAAGAAACACGTCACTTCTTACAAGAGGAGCATTAGCCTACTTGGCACCACTAGATAC
CACAACATAATGGACATGAATGCCGGACTTGGAGGATTTGCAGCAGCACTAGACTCTCCT
AAACTGTGGGTGATGAATGTTGTGCCAACTATTGCTGAAAACACTCTTGGTGTCGTATAC
GAAAGGGGCTTAATTGGCATATACCATGACTGGTGTGAAGGCTTCTCTACATACCCGAGA
ACGTATGACCTTCTTCATGCTAATCGCTTGTTCACTCTGTACCAGGACAAGTGTGAATTT
GAAGATATTCTCCTAGAAATGGACCGTGTTCTGCGTCCTGAAGGTGCGGTCATTCTTCGA
GATGGAGTTGAAGTCTTGAACAAGGTTAGGAAAATCGCCGCGGGCCTGAGATGGGACACT
AAATTATTAGATCATGAAGATGGACCCTTGGTGCCTGAGAAAATCTTTGTTGCTGTCAAA
CAATATGTTGTTGAAGGTGATGAAGAACAAAGCACGCCAAACGTCGATTGA