Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062187
CDS Infomation

pacid=37433607 polypeptide=PGSC0003DMP400041850 locus=PGSC0003DMG400024204 ID=PGSC0003DMT400062187.v4.03 annot-version=v4.03
Sequence

ATGAGTTGCAATTACTTGTATCGCTCCGTTTCTCACAGACTCCCTAACTTTATTTGTTAT
ACCCCAATTGCCCCTACCATTCTCAGTCATAAATCCCCATTTTGCTCTTCCCGGCGCCGG
CGACAATCCCGTTCATTTTCCATTTCCGCCGGCAATAGCTTCACCTGGGACGACGTTTTC
CGAGTACCGGAATCTCCTCAAAATGACGACTCTGCCCTCTCTGGTTTTTTCGATAAAATC
AAGCTTTGTAATCGCGATTTGGAGAAGCAATGTGAGTTCATGCCTTTCGTGATTGAGGAC
CAAATAATTGGCTACGTTCACCATGGGTTTGCTGATTTTCTGAAGCCATTTCAGAATGTA
TTCATTTTCCCGCAAGATAATACCTATGGTAGTCATTTTGGATGTTACTGCACTTTACAT
CCAAACCTGAGTACACCCAACGATCGAACCAAAGCTGTAGCCAATGTCGTTAAGTCTTTG
GGCGAACTGATCCCCGGCATAAGAAATGAGTTATTTCCGGTCGCTTCAGCTTTCGGGGAA
CACATATTTTTTGCACTGGAACGAGCTGCTGCGCCATACTTTGGGATAAAGGCTTATGGA
GTTCATATGAATGGCTATCTTGAAAAAGATGGGCAGGAATTTCTATGGCTAGGAAAGAGA
AGTGAACAAAAAACCACCTATCCTGGAATGCTTGATCATTTAGTCGCTGGGGGATTGCCA
CATGATATTTCTTGTGGAGAAAATCTTATTAAGGAATGTGAAGAGGAAGCAGGGATACCA
AGATCTATTTCCCATACCGCTAAGCCAGTTGGAGCTGTGTCCTACGTTGACATAGAAGGA
TATAGGATGAAGAGAGATGTCCTCTTTTGTTATGATCTTAAGCTTCCTGGCGGCTTCATT
CCTCATAACGAGGATGGGGAGGTAGAAAGCTTTCGATTGGTCCCAGTCACAAAAGTTGCA
AATATCATCCGAAACACATCGTTCTTCAAAGCAAATTGCAATCTTGTCATTACTGATTTC
CTTTTCCGGCATGGGCACATCAAACCAGAAGTGTTTGGGTACCTGAAGCTACTGCAGAGT
TTGAGAAGTGGATATTGCTCGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400041850
PEP Infomation

pacid=37433607 transcript=PGSC0003DMT400062187 locus=PGSC0003DMG400024204 ID=PGSC0003DMT400062187.v4.03 annot-version=v4.03
Sequence

MSCNYLYRSVSHRLPNFICYTPIAPTILSHKSPFCSSRRRRQSRSFSISAGNSFTWDDVF
RVPESPQNDDSALSGFFDKIKLCNRDLEKQCEFMPFVIEDQIIGYVHHGFADFLKPFQNV
FIFPQDNTYGSHFGCYCTLHPNLSTPNDRTKAVANVVKSLGELIPGIRNELFPVASAFGE
HIFFALERAAAPYFGIKAYGVHMNGYLEKDGQEFLWLGKRSEQKTTYPGMLDHLVAGGLP
HDISCGENLIKECEEEAGIPRSISHTAKPVGAVSYVDIEGYRMKRDVLFCYDLKLPGGFI
PHNEDGEVESFRLVPVTKVANIIRNTSFFKANCNLVITDFLFRHGHIKPEVFGYLKLLQS
LRSGYCS*

Transcript Sequence

Transcript ID

PGSC0003DMT400062187
Transcript Infomation

pacid=37433607 locus=PGSC0003DMG400024204 ID=PGSC0003DMT400062187.v4.03 annot-version=v4.03
Sequence

ATGAGTTGCAATTACTTGTATCGCTCCGTTTCTCACAGACTCCCTAACTTTATTTGTTAT
ACCCCAATTGCCCCTACCATTCTCAGTCATAAATCCCCATTTTGCTCTTCCCGGCGCCGG
CGACAATCCCGTTCATTTTCCATTTCCGCCGGCAATAGCTTCACCTGGGACGACGTTTTC
CGAGTACCGGAATCTCCTCAAAATGACGACTCTGCCCTCTCTGGTTTTTTCGATAAAATC
AAGCTTTGTAATCGCGATTTGGAGAAGCAATGTGAGTTCATGCCTTTCGTGATTGAGGAC
CAAATAATTGGCTACGTTCACCATGGGTTTGCTGATTTTCTGAAGCCATTTCAGAATGTA
TTCATTTTCCCGCAAGATAATACCTATGGTAGTCATTTTGGATGTTACTGCACTTTACAT
CCAAACCTGAGTACACCCAACGATCGAACCAAAGCTGTAGCCAATGTCGTTAAGTCTTTG
GGCGAACTGATCCCCGGCATAAGAAATGAGTTATTTCCGGTCGCTTCAGCTTTCGGGGAA
CACATATTTTTTGCACTGGAACGAGCTGCTGCGCCATACTTTGGGATAAAGGCTTATGGA
GTTCATATGAATGGCTATCTTGAAAAAGATGGGCAGGAATTTCTATGGCTAGGAAAGAGA
AGTGAACAAAAAACCACCTATCCTGGAATGCTTGATCATTTAGTCGCTGGGGGATTGCCA
CATGATATTTCTTGTGGAGAAAATCTTATTAAGGAATGTGAAGAGGAAGCAGGGATACCA
AGATCTATTTCCCATACCGCTAAGCCAGTTGGAGCTGTGTCCTACGTTGACATAGAAGGA
TATAGGATGAAGAGAGATGTCCTCTTTTGTTATGATCTTAAGCTTCCTGGCGGCTTCATT
CCTCATAACGAGGATGGGGAGGTAGAAAGCTTTCGATTGGTCCCAGTCACAAAAGTTGCA
AATATCATCCGAAACACATCGTTCTTCAAAGCAAATTGCAATCTTGTCATTACTGATTTC
CTTTTCCGGCATGGGCACATCAAACCAGAAGTGTTTGGGTACCTGAAGCTACTGCAGAGT
TTGAGAAGTGGATATTGCTCGTAA