Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062059
CDS Infomation

pacid=37451260 polypeptide=PGSC0003DMP400041758 locus=PGSC0003DMG400024149 ID=PGSC0003DMT400062059.v4.03 annot-version=v4.03
Sequence

ATGCCTTTCTTCAGGGGACTCACAAAGAAAAAACTTTTTCCCTCTGCCTCTGCTGAACAG
CGGAAGAAAGAGTATGATTGTTATTTACAGAATGGAAGTTGCGTGCTTGAGGAGTTTCTT
GCTTTATGCGACGGAAATTGCAGAATTCCCATCCGTTACTTTACTGCCATAGAGATCGAC
AGGGCAATAAAACACACTAAAAGCAAAATGGAGCTTTCCAATGTGTATATGGTTACGGGC
TCGCTAGACAACCGCCTCGTTTTAGTTAGGTTCAACAATTGTGAGTTCAACAATATCCAC
CGAGATATAGCGATTACTGCTCAAATGAGTCATCTCAAGAATGTGTTAAGACTTGTCGGT
TGCTGTCTAGAATTTGAAGAGCCAGTTATGGTGTATGAATATGTTGAAGGTATATCTCTC
AGCGATCTACTTTTCAAAAAGGGTAATATTAATAGAAAATCGTCACTATCTTGGGGAAAT
CGATTACGGATTTCCAATAACGTTGCTTCTGCAATCGTTTTTTTGCATACCGAATTTACT
ACGCCCATTATCCACAGAGATTTGAAGCCTCACAATGTGATAATAGATGAGAAGAGCGGT
GTTGCCAAAATAGTAGACTTCTCATTGTCCATATCACTGCCTCCGGGAGAATTGGAGGTA
CAAGATCGAGTGTGTGGAACAATCTGGTATATAGCTCCAGAACATATCCACCAGGGTATT
ATTACTCAAAAAACTGATGTCTACAACTTTGGGATTCTTCTCTTTCAGCTATTAACCGGA
AAGGAAGTGTGCGGTAGTGTGGGATCCGATGATGATGTTATGGATAGAGCGGATTCTAAA
AATTCAAAAGAGACAACAGATTTCGAAGAAGATAACTCTATGCATAGGATGGATTCTGCA
ATTCCAGAAGAAATAATAGATTTTGAAAATCTTCCACCCAACCTCGTCGATCACTATATT
AAAGAGTGTAATATAATGGATCCTACCATTTTCAAAGAGCATGGAATTGAGATTCAACAA
CAATTGAAAGACTGCTTGAATCTTTCTAGGAAATGCACAGCTGACAAGGGAGAAGATAGA
CCATACATGATTCATGTCGCAAGGGAATTGTGTCGTATTGAGAAGGGTTTCCCTCTTGAT
CAAAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400041758
PEP Infomation

pacid=37451260 transcript=PGSC0003DMT400062059 locus=PGSC0003DMG400024149 ID=PGSC0003DMT400062059.v4.03 annot-version=v4.03
Sequence

MPFFRGLTKKKLFPSASAEQRKKEYDCYLQNGSCVLEEFLALCDGNCRIPIRYFTAIEID
RAIKHTKSKMELSNVYMVTGSLDNRLVLVRFNNCEFNNIHRDIAITAQMSHLKNVLRLVG
CCLEFEEPVMVYEYVEGISLSDLLFKKGNINRKSSLSWGNRLRISNNVASAIVFLHTEFT
TPIIHRDLKPHNVIIDEKSGVAKIVDFSLSISLPPGELEVQDRVCGTIWYIAPEHIHQGI
ITQKTDVYNFGILLFQLLTGKEVCGSVGSDDDVMDRADSKNSKETTDFEEDNSMHRMDSA
IPEEIIDFENLPPNLVDHYIKECNIMDPTIFKEHGIEIQQQLKDCLNLSRKCTADKGEDR
PYMIHVARELCRIEKGFPLDQN*

Transcript Sequence

Transcript ID

PGSC0003DMT400062059
Transcript Infomation

pacid=37451260 locus=PGSC0003DMG400024149 ID=PGSC0003DMT400062059.v4.03 annot-version=v4.03
Sequence

ATGCCTTTCTTCAGGGGACTCACAAAGAAAAAACTTTTTCCCTCTGCCTCTGCTGAACAG
CGGAAGAAAGAGTATGATTGTTATTTACAGAATGGAAGTTGCGTGCTTGAGGAGTTTCTT
GCTTTATGCGACGGAAATTGCAGAATTCCCATCCGTTACTTTACTGCCATAGAGATCGAC
AGGGCAATAAAACACACTAAAAGCAAAATGGAGCTTTCCAATGTGTATATGGTTACGGGC
TCGCTAGACAACCGCCTCGTTTTAGTTAGGTTCAACAATTGTGAGTTCAACAATATCCAC
CGAGATATAGCGATTACTGCTCAAATGAGTCATCTCAAGAATGTGTTAAGACTTGTCGGT
TGCTGTCTAGAATTTGAAGAGCCAGTTATGGTGTATGAATATGTTGAAGGTATATCTCTC
AGCGATCTACTTTTCAAAAAGGGTAATATTAATAGAAAATCGTCACTATCTTGGGGAAAT
CGATTACGGATTTCCAATAACGTTGCTTCTGCAATCGTTTTTTTGCATACCGAATTTACT
ACGCCCATTATCCACAGAGATTTGAAGCCTCACAATGTGATAATAGATGAGAAGAGCGGT
GTTGCCAAAATAGTAGACTTCTCATTGTCCATATCACTGCCTCCGGGAGAATTGGAGGTA
CAAGATCGAGTGTGTGGAACAATCTGGTATATAGCTCCAGAACATATCCACCAGGGTATT
ATTACTCAAAAAACTGATGTCTACAACTTTGGGATTCTTCTCTTTCAGCTATTAACCGGA
AAGGAAGTGTGCGGTAGTGTGGGATCCGATGATGATGTTATGGATAGAGCGGATTCTAAA
AATTCAAAAGAGACAACAGATTTCGAAGAAGATAACTCTATGCATAGGATGGATTCTGCA
ATTCCAGAAGAAATAATAGATTTTGAAAATCTTCCACCCAACCTCGTCGATCACTATATT
AAAGAGTGTAATATAATGGATCCTACCATTTTCAAAGAGCATGGAATTGAGATTCAACAA
CAATTGAAAGACTGCTTGAATCTTTCTAGGAAATGCACAGCTGACAAGGGAGAAGATAGA
CCATACATGATTCATGTCGCAAGGGAATTGTGTCGTATTGAGAAGGGTTTCCCTCTTGAT
CAAAATTAA