Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062036
CDS Infomation

pacid=37469897 polypeptide=PGSC0003DMP400041749 locus=PGSC0003DMG400024141 ID=PGSC0003DMT400062036.v4.03 annot-version=v4.03
Sequence

ATGTCTTCGCTTTCACCTCCTCTCCCAATCCCAATTCTCCATAGCTCTACACACCATTAT
AGTACTCTTCGTCTTGTTAATCTCCAAAAGTCTCCATCTTTACACTTCCACAGAAACCTT
AAGCTCTATATCGGAGCTTCTGCAGTTCCCCTTCACCGGAGCTCGGCGAATTTTCCGGCG
TCCGGTGAAGCTCTTCGTCGAATTGCTGCTTCTGCTGTTCTTTTTCTTAGTTTGGGTTCG
ACCCTTTTCGCCTTTAGGGCCGTTGCTTCAACCCATGTTCCTCCTTCAGACCCTTGTGTA
ACTCAGCTTCAGGAACAAGAATCTCAAGGCACTGGAGTTGGAAAATCAGAAAATGTGGAG
GATATCGATAATGAAGACCTTCAAGCAGCATTTGAGAAATGGAAGTCTAAGACATATGCT
TTGACTGTACCTTTAAGAGTTGTTTCTCTTAGTAACTCTTTTCCTCCTGTATGGCTCAAG
GATTTTTTGCGATCTCAAGGGAAGAGAGTGAAATTACGTTCTGAGTTTCGTCAAAGCCTG
CAAGACATCTTTCATGAACTTTGTATACCTTTACAGAAAGGAAAAATTAATCCTAAATCT
GCTCTGGCAGCTGATGTTGTCACTCTTGGTGATACGTGGCTCAGTCATGCCATTGAGAAG
AGATTAATTGAGCCGATGGATGGCTTAGAAGATCAAGATTGGTTTGAGAATTTGAATGAG
AAATGGAAGGTATATTTGCGCAGGAGTGATGAAGGGAAACTGGATGCTAGTGGTAGGATA
TGGGCGGCTCCATATAGATGGGGAAGCATAGTGATAGCTTACAAGAAAAGTGAATTTCAA
AAGCGTAAAATGGCTCCTATAGAGGACTGGGCCGATCTATGGCGACCTGAGCTTGCTGGA
AAGATTGCAATGGTAGATTCACCACGAGAGATTGTGGGTGCAGTGTTAAAGAACATGGGA
GCATCATACAACACAATAGACATGTCTGAAGTTGCTGGTGGGAAAGAGGCTGTGCAGCAG
AATCTTGCATCACTTGTTAAACAGGTCCGGCTATTTGATAGTCGCCACTATCTTAAAGCC
TTCGGAGTTGGAGATGTATGGGTAGCTGTTGGATGGAGCAATGATGTTATTCCAGCTGCG
AAGCGGTTGTCAAATATTGCTGTTATTGTTCCCAAATCTGGTGCAAGCTTGTGGGCTGAT
TGCTGGGCAATACCTGCTGCTTCAAGAATGGCAACTGATCAAATTGGTGGAAGAGTTAGA
GGACCATCACCAGTAGTGCATCAGTGGATAGAATTCTGTTTGCAAGCTGAAAGATTCAAA
GACGACGTTGTCCCAGGTGCTTCACCTAACACTCTTGGATCCTCGGTTAAAGTCTCCGAA
GAGCTTACTAGAGGTAGACCAAAACTTGAGACAAACCTCATTGCTGGAGTCCCTCCATCT
GATATCTTGGCTAAATGTGAACTGATAGAGCCATTACCAGAAAAGACATTGTCCGAGTAT
CGGTGGCTAATAAATAGTGTACAGAAGCCAGAGAGTTCTCTGGTGGATAGATTAAGCAAT
CGTATCTCGTCACTAGCTTATTACCTTCTTTGTAAAGTGCAGTCAAAGGATGCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400041749
PEP Infomation

pacid=37469897 transcript=PGSC0003DMT400062036 locus=PGSC0003DMG400024141 ID=PGSC0003DMT400062036.v4.03 annot-version=v4.03
Sequence

MSSLSPPLPIPILHSSTHHYSTLRLVNLQKSPSLHFHRNLKLYIGASAVPLHRSSANFPA
SGEALRRIAASAVLFLSLGSTLFAFRAVASTHVPPSDPCVTQLQEQESQGTGVGKSENVE
DIDNEDLQAAFEKWKSKTYALTVPLRVVSLSNSFPPVWLKDFLRSQGKRVKLRSEFRQSL
QDIFHELCIPLQKGKINPKSALAADVVTLGDTWLSHAIEKRLIEPMDGLEDQDWFENLNE
KWKVYLRRSDEGKLDASGRIWAAPYRWGSIVIAYKKSEFQKRKMAPIEDWADLWRPELAG
KIAMVDSPREIVGAVLKNMGASYNTIDMSEVAGGKEAVQQNLASLVKQVRLFDSRHYLKA
FGVGDVWVAVGWSNDVIPAAKRLSNIAVIVPKSGASLWADCWAIPAASRMATDQIGGRVR
GPSPVVHQWIEFCLQAERFKDDVVPGASPNTLGSSVKVSEELTRGRPKLETNLIAGVPPS
DILAKCELIEPLPEKTLSEYRWLINSVQKPESSLVDRLSNRISSLAYYLLCKVQSKDA*

Transcript Sequence

Transcript ID

PGSC0003DMT400062036
Transcript Infomation

pacid=37469897 locus=PGSC0003DMG400024141 ID=PGSC0003DMT400062036.v4.03 annot-version=v4.03
Sequence

ATGTCTTCGCTTTCACCTCCTCTCCCAATCCCAATTCTCCATAGCTCTACACACCATTAT
AGTACTCTTCGTCTTGTTAATCTCCAAAAGTCTCCATCTTTACACTTCCACAGAAACCTT
AAGCTCTATATCGGAGCTTCTGCAGTTCCCCTTCACCGGAGCTCGGCGAATTTTCCGGCG
TCCGGTGAAGCTCTTCGTCGAATTGCTGCTTCTGCTGTTCTTTTTCTTAGTTTGGGTTCG
ACCCTTTTCGCCTTTAGGGCCGTTGCTTCAACCCATGTTCCTCCTTCAGACCCTTGTGTA
ACTCAGCTTCAGGAACAAGAATCTCAAGGCACTGGAGTTGGAAAATCAGAAAATGTGGAG
GATATCGATAATGAAGACCTTCAAGCAGCATTTGAGAAATGGAAGTCTAAGACATATGCT
TTGACTGTACCTTTAAGAGTTGTTTCTCTTAGTAACTCTTTTCCTCCTGTATGGCTCAAG
GATTTTTTGCGATCTCAAGGGAAGAGAGTGAAATTACGTTCTGAGTTTCGTCAAAGCCTG
CAAGACATCTTTCATGAACTTTGTATACCTTTACAGAAAGGAAAAATTAATCCTAAATCT
GCTCTGGCAGCTGATGTTGTCACTCTTGGTGATACGTGGCTCAGTCATGCCATTGAGAAG
AGATTAATTGAGCCGATGGATGGCTTAGAAGATCAAGATTGGTTTGAGAATTTGAATGAG
AAATGGAAGGTATATTTGCGCAGGAGTGATGAAGGGAAACTGGATGCTAGTGGTAGGATA
TGGGCGGCTCCATATAGATGGGGAAGCATAGTGATAGCTTACAAGAAAAGTGAATTTCAA
AAGCGTAAAATGGCTCCTATAGAGGACTGGGCCGATCTATGGCGACCTGAGCTTGCTGGA
AAGATTGCAATGGTAGATTCACCACGAGAGATTGTGGGTGCAGTGTTAAAGAACATGGGA
GCATCATACAACACAATAGACATGTCTGAAGTTGCTGGTGGGAAAGAGGCTGTGCAGCAG
AATCTTGCATCACTTGTTAAACAGGTCCGGCTATTTGATAGTCGCCACTATCTTAAAGCC
TTCGGAGTTGGAGATGTATGGGTAGCTGTTGGATGGAGCAATGATGTTATTCCAGCTGCG
AAGCGGTTGTCAAATATTGCTGTTATTGTTCCCAAATCTGGTGCAAGCTTGTGGGCTGAT
TGCTGGGCAATACCTGCTGCTTCAAGAATGGCAACTGATCAAATTGGTGGAAGAGTTAGA
GGACCATCACCAGTAGTGCATCAGTGGATAGAATTCTGTTTGCAAGCTGAAAGATTCAAA
GACGACGTTGTCCCAGGTGCTTCACCTAACACTCTTGGATCCTCGGTTAAAGTCTCCGAA
GAGCTTACTAGAGGTAGACCAAAACTTGAGACAAACCTCATTGCTGGAGTCCCTCCATCT
GATATCTTGGCTAAATGTGAACTGATAGAGCCATTACCAGAAAAGACATTGTCCGAGTAT
CGGTGGCTAATAAATAGTGTACAGAAGCCAGAGAGTTCTCTGGTGGATAGATTAAGCAAT
CGTATCTCGTCACTAGCTTATTACCTTCTTTGTAAAGTGCAGTCAAAGGATGCCTGA