Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062001
CDS Infomation

pacid=37435341 polypeptide=PGSC0003DMP400041730 locus=PGSC0003DMG400024129 ID=PGSC0003DMT400062001.v4.03 annot-version=v4.03
Sequence

ATGGCTCCAACATTGGCAACAATCTCTATTAATTCCAACACATGGGATGTCAAAAATTTT
GTTGTAAATGAAGGGCATGGAGTGAAAGGTCTTGCAGACATGGGCATTCAAACACTTCCT
AAACAATACATTCAACCTCTCGAAGAGCGAATAACCTCAAGTGATGTGGTGGTGGATGAA
GAACAATGTATACCAGTCATTGATCTATCAAATTGGAATGATACGAAAGTGGACAACATG
ATATGTAATGCAGCAGAGAAATGGGGTTTTTTCCAGATTGTTAATCATGGAATTCCAATA
AAAGTTTTTGAGAATGTTAAAGATGCTACTCATAGGTTCTTTGCTTTGTCTGCTCAAGAA
AAGAACAAGTACTCAAAAGACTATTCTTGTACAAATAATGTTCGTTTTGGGACAAGCTTT
ACTCCTCAAGCTGAAAAGGCTTTAGAGTGGAAAGATTACCTTAGCCTCTTTTATGTTTCT
GACGAAGAAGCATCTGCACTTTGGCCTCCTGCTTGCAGGGATGAAGCACTTGAGTTCATG
AAAAAGACTGAGCTTGTGATCAAAAGACTGATGGAATCACTAATGAAAGGACTAAATGTG
AAGGAAATTGATGAAGATAGGGAATCACTTCTAATGGGTTCCAAAAGGATCAACCTTAAC
TACTATCCCAAATGTCCAAACCCCGAACTTACTGTCGGGGTAGGACGTCACTCTGATGTC
TCAACATTAACCATCTTACTTCAAGACAACATCGGAGGACTCTACGTGAAAAAACTAGGC
AATGAAACTTGGCTTCCCGTCCCACCAATAAGTGGAGCGCTTGTGATTAACATCGGTGAT
GCACTTCAAATCCTGAGCAATGGTCGATACAAGAGTATCGAGCATCGTGTTATTGCTAAT
GGAAGCAATAACAGAGTTTCAGTGCCAATATTTGTGAACCCTAAGCCTAATGATGTTATT
GGTCCTTTACAAGAAGTGTTAGAAAGCGGTGAGAAGGCAGTGTATAAGCAAGTTCTTTAT
TCGGATTATGTCAAGCATTTCTTCAGAAAAGCTCATGATGGGAAGGACACCGTTGATTTT
GCAAAGATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400041730
PEP Infomation

pacid=37435341 transcript=PGSC0003DMT400062001 locus=PGSC0003DMG400024129 ID=PGSC0003DMT400062001.v4.03 annot-version=v4.03
Sequence

MAPTLATISINSNTWDVKNFVVNEGHGVKGLADMGIQTLPKQYIQPLEERITSSDVVVDE
EQCIPVIDLSNWNDTKVDNMICNAAEKWGFFQIVNHGIPIKVFENVKDATHRFFALSAQE
KNKYSKDYSCTNNVRFGTSFTPQAEKALEWKDYLSLFYVSDEEASALWPPACRDEALEFM
KKTELVIKRLMESLMKGLNVKEIDEDRESLLMGSKRINLNYYPKCPNPELTVGVGRHSDV
STLTILLQDNIGGLYVKKLGNETWLPVPPISGALVINIGDALQILSNGRYKSIEHRVIAN
GSNNRVSVPIFVNPKPNDVIGPLQEVLESGEKAVYKQVLYSDYVKHFFRKAHDGKDTVDF
AKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400062001
Transcript Infomation

pacid=37435341 locus=PGSC0003DMG400024129 ID=PGSC0003DMT400062001.v4.03 annot-version=v4.03
Sequence

ATGGCTCCAACATTGGCAACAATCTCTATTAATTCCAACACATGGGATGTCAAAAATTTT
GTTGTAAATGAAGGGCATGGAGTGAAAGGTCTTGCAGACATGGGCATTCAAACACTTCCT
AAACAATACATTCAACCTCTCGAAGAGCGAATAACCTCAAGTGATGTGGTGGTGGATGAA
GAACAATGTATACCAGTCATTGATCTATCAAATTGGAATGATACGAAAGTGGACAACATG
ATATGTAATGCAGCAGAGAAATGGGGTTTTTTCCAGATTGTTAATCATGGAATTCCAATA
AAAGTTTTTGAGAATGTTAAAGATGCTACTCATAGGTTCTTTGCTTTGTCTGCTCAAGAA
AAGAACAAGTACTCAAAAGACTATTCTTGTACAAATAATGTTCGTTTTGGGACAAGCTTT
ACTCCTCAAGCTGAAAAGGCTTTAGAGTGGAAAGATTACCTTAGCCTCTTTTATGTTTCT
GACGAAGAAGCATCTGCACTTTGGCCTCCTGCTTGCAGGGATGAAGCACTTGAGTTCATG
AAAAAGACTGAGCTTGTGATCAAAAGACTGATGGAATCACTAATGAAAGGACTAAATGTG
AAGGAAATTGATGAAGATAGGGAATCACTTCTAATGGGTTCCAAAAGGATCAACCTTAAC
TACTATCCCAAATGTCCAAACCCCGAACTTACTGTCGGGGTAGGACGTCACTCTGATGTC
TCAACATTAACCATCTTACTTCAAGACAACATCGGAGGACTCTACGTGAAAAAACTAGGC
AATGAAACTTGGCTTCCCGTCCCACCAATAAGTGGAGCGCTTGTGATTAACATCGGTGAT
GCACTTCAAATCCTGAGCAATGGTCGATACAAGAGTATCGAGCATCGTGTTATTGCTAAT
GGAAGCAATAACAGAGTTTCAGTGCCAATATTTGTGAACCCTAAGCCTAATGATGTTATT
GGTCCTTTACAAGAAGTGTTAGAAAGCGGTGAGAAGGCAGTGTATAAGCAAGTTCTTTAT
TCGGATTATGTCAAGCATTTCTTCAGAAAAGCTCATGATGGGAAGGACACCGTTGATTTT
GCAAAGATATGA