Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061974
CDS Infomation

pacid=37479393 polypeptide=PGSC0003DMP400041720 locus=PGSC0003DMG400024120 ID=PGSC0003DMT400061974.v4.03 annot-version=v4.03
Sequence

ATGGCTTGCTTAAACATTGATAAAATGTGTGAGAAGAGGGAGATGGAAAAAGACGAATAT
ACCTTTGATGGAAGTGTGGATAAGCATGGTGAACCTGCGGTGCGTGCTAAGACTGGAAGG
TGGTTTGCTGGTGTTCTCTTACTTGTGAATCAAGGTCTAGCTACACTAGCATTCTTTGGA
GTTGGAGTGAATTTAGTACTATTTTTAACTAGAGTTATGGGTCAAGACAATGCTGAAGCA
GCCAACAGTGTGAGCAAATGGACAGGCACAGTTTATATCTTTTCCCTTTTGGGAGCTTTC
GTAAGTGATTCCTACTGGGGAAGATATAAGACTTGTGCTATTTTCCAAGCCATTTTTGTA
GCGGGACTGGTTTCACTTTCATTGACTTCATACATTTTCTTAATCAAGCCTAACGACTGT
GGAGATGAGGAGACCCCTTGTGGGACCCACTCAACTATCAGCGTCGCCCTCTTCTATGTG
TCAATTTACTTAATTGCCCTTGGAAATGGAGGGTATCAACCTACTATTGCAACATTTGGA
GCAGACCAATTTGATGAAGATCACCCTCAAGAAAGTCACTCAAAAGTGGCTTTTTTTAGC
TACTTTTACCTTGCATTAAATCTTGGATCTTTGTTCTCAAATACCATCTTAGGATATTTT
GAAGATCAAGGAATGTGGACAATAGGCTTTTGGGCTTCAGCTGGCTCTGCCATTTTGGCA
CTTGTCCTGTTTCTTATTGGAACACCTAGATATAGACACTTCAAACCCACAGGCAACCCT
CTATCAAGATTTTGTCAAGTGGTTGTAGCTGCAACTAAGAAATGGAATGTTGAACAACCT
TCAAGGGGTGATGAACTATATGAAGGTGATGAACAAGACCTTCCTCTCAATGGAAATAGA
AGAATTCTCCACACACAAGGATTCAAATTCTTGGATAGAGCAGCTATAATCACATCAAAG
GAAGGAGGAGGAAACAGCCCATGGCGCCTTTGTGCAGTGTCTCAAGTAGAAGAAGTGAAA
TGCATATTGAGACTACTTCCAATTTGGCTTTGCACAATACTTTATTCAGTTGTGTTTACT
CAAATGGCCTCTTTATTTGTGGAGCAAGGGGCTGCAATGAAAACAACTCTTTCAGGATTC
CATATTCCTCCAGCAAGCATGTCTAGTTTCGACATCCTCAGTGTTGCATCATTCATTTTC
ATCTACAGGCGAGTTCTTGATCCCCTCGTTGCAAGATTAAAAAAATCTTCTCCAAGGGGA
TTGACAGAGCTTCAAAGGATGGGAGTTGGCCTCATAATTGCTATAATGGCAATGGTAGCT
GCAGGAATAGTTGAGCACTTCAGGTTAAAATCGGCAGAAAAAGATTGTTCACATGACTGC
TCGAATTCAAGTTCTTTAAGCATTTTCTGGCAAGTACCTCAATATGTACTAATAGGAGCA
TCGGAGGTGTTTATGTATGTTGGACAATTGGAGTTCTTTAATGGACAAGCACCTGATGGA
TTGAAAAGCTTTGGAAGTGCATTGTGTATGACTTCAATTTCACTAGGAAACTATGTGAGC
AGCTTGTTGGTTTCTGTTGTCATGAAAATTTCAACTACTGATAATATGCCTGGATGGATA
CCTGGAAATCTCAACAAGGGTCATTTAGACAGATTCTATTTCTTGTTAGCAGCTTTGACA
TCAGCTGATTTTTTGGTCTATCTCATTTGTGCAAAGTGGTATAAGTACATTAAGTTTGAA
GAAAGAAGCATTGAAAAGCAAAATGGAGAGAAGCAAGGTGATTTCAGAGTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400041720
PEP Infomation

pacid=37479393 transcript=PGSC0003DMT400061974 locus=PGSC0003DMG400024120 ID=PGSC0003DMT400061974.v4.03 annot-version=v4.03
Sequence

MACLNIDKMCEKREMEKDEYTFDGSVDKHGEPAVRAKTGRWFAGVLLLVNQGLATLAFFG
VGVNLVLFLTRVMGQDNAEAANSVSKWTGTVYIFSLLGAFVSDSYWGRYKTCAIFQAIFV
AGLVSLSLTSYIFLIKPNDCGDEETPCGTHSTISVALFYVSIYLIALGNGGYQPTIATFG
ADQFDEDHPQESHSKVAFFSYFYLALNLGSLFSNTILGYFEDQGMWTIGFWASAGSAILA
LVLFLIGTPRYRHFKPTGNPLSRFCQVVVAATKKWNVEQPSRGDELYEGDEQDLPLNGNR
RILHTQGFKFLDRAAIITSKEGGGNSPWRLCAVSQVEEVKCILRLLPIWLCTILYSVVFT
QMASLFVEQGAAMKTTLSGFHIPPASMSSFDILSVASFIFIYRRVLDPLVARLKKSSPRG
LTELQRMGVGLIIAIMAMVAAGIVEHFRLKSAEKDCSHDCSNSSSLSIFWQVPQYVLIGA
SEVFMYVGQLEFFNGQAPDGLKSFGSALCMTSISLGNYVSSLLVSVVMKISTTDNMPGWI
PGNLNKGHLDRFYFLLAALTSADFLVYLICAKWYKYIKFEERSIEKQNGEKQGDFRV*

Transcript Sequence

Transcript ID

PGSC0003DMT400061974
Transcript Infomation

pacid=37479393 locus=PGSC0003DMG400024120 ID=PGSC0003DMT400061974.v4.03 annot-version=v4.03
Sequence

ATGGCTTGCTTAAACATTGATAAAATGTGTGAGAAGAGGGAGATGGAAAAAGACGAATAT
ACCTTTGATGGAAGTGTGGATAAGCATGGTGAACCTGCGGTGCGTGCTAAGACTGGAAGG
TGGTTTGCTGGTGTTCTCTTACTTGTGAATCAAGGTCTAGCTACACTAGCATTCTTTGGA
GTTGGAGTGAATTTAGTACTATTTTTAACTAGAGTTATGGGTCAAGACAATGCTGAAGCA
GCCAACAGTGTGAGCAAATGGACAGGCACAGTTTATATCTTTTCCCTTTTGGGAGCTTTC
GTAAGTGATTCCTACTGGGGAAGATATAAGACTTGTGCTATTTTCCAAGCCATTTTTGTA
GCGGGACTGGTTTCACTTTCATTGACTTCATACATTTTCTTAATCAAGCCTAACGACTGT
GGAGATGAGGAGACCCCTTGTGGGACCCACTCAACTATCAGCGTCGCCCTCTTCTATGTG
TCAATTTACTTAATTGCCCTTGGAAATGGAGGGTATCAACCTACTATTGCAACATTTGGA
GCAGACCAATTTGATGAAGATCACCCTCAAGAAAGTCACTCAAAAGTGGCTTTTTTTAGC
TACTTTTACCTTGCATTAAATCTTGGATCTTTGTTCTCAAATACCATCTTAGGATATTTT
GAAGATCAAGGAATGTGGACAATAGGCTTTTGGGCTTCAGCTGGCTCTGCCATTTTGGCA
CTTGTCCTGTTTCTTATTGGAACACCTAGATATAGACACTTCAAACCCACAGGCAACCCT
CTATCAAGATTTTGTCAAGTGGTTGTAGCTGCAACTAAGAAATGGAATGTTGAACAACCT
TCAAGGGGTGATGAACTATATGAAGGTGATGAACAAGACCTTCCTCTCAATGGAAATAGA
AGAATTCTCCACACACAAGGATTCAAATTCTTGGATAGAGCAGCTATAATCACATCAAAG
GAAGGAGGAGGAAACAGCCCATGGCGCCTTTGTGCAGTGTCTCAAGTAGAAGAAGTGAAA
TGCATATTGAGACTACTTCCAATTTGGCTTTGCACAATACTTTATTCAGTTGTGTTTACT
CAAATGGCCTCTTTATTTGTGGAGCAAGGGGCTGCAATGAAAACAACTCTTTCAGGATTC
CATATTCCTCCAGCAAGCATGTCTAGTTTCGACATCCTCAGTGTTGCATCATTCATTTTC
ATCTACAGGCGAGTTCTTGATCCCCTCGTTGCAAGATTAAAAAAATCTTCTCCAAGGGGA
TTGACAGAGCTTCAAAGGATGGGAGTTGGCCTCATAATTGCTATAATGGCAATGGTAGCT
GCAGGAATAGTTGAGCACTTCAGGTTAAAATCGGCAGAAAAAGATTGTTCACATGACTGC
TCGAATTCAAGTTCTTTAAGCATTTTCTGGCAAGTACCTCAATATGTACTAATAGGAGCA
TCGGAGGTGTTTATGTATGTTGGACAATTGGAGTTCTTTAATGGACAAGCACCTGATGGA
TTGAAAAGCTTTGGAAGTGCATTGTGTATGACTTCAATTTCACTAGGAAACTATGTGAGC
AGCTTGTTGGTTTCTGTTGTCATGAAAATTTCAACTACTGATAATATGCCTGGATGGATA
CCTGGAAATCTCAACAAGGGTCATTTAGACAGATTCTATTTCTTGTTAGCAGCTTTGACA
TCAGCTGATTTTTTGGTCTATCTCATTTGTGCAAAGTGGTATAAGTACATTAAGTTTGAA
GAAAGAAGCATTGAAAAGCAAAATGGAGAGAAGCAAGGTGATTTCAGAGTGTAG