Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061894
CDS Infomation

pacid=37460112 polypeptide=PGSC0003DMP400041666 locus=PGSC0003DMG400024081 ID=PGSC0003DMT400061894.v4.03 annot-version=v4.03
Sequence

ATGGATAGATCCAGTAGTGTTAGTAGAAGAGAAGCACACACAACAAATGGTACCAAAAAA
ACTCAAGAAGAATTATTAGTACAAGAAGAAGAGCAAGAAGTACTATCAGTAGAAAGGATA
TTTGAATCAAAACAAGTGCCATCATGGCAAAGTCAATTAACATTAAGGGCATTTTTTGTG
AGCTTAATATTGGGAATTTTATTTACTTTTATTGTTATGAAATTGAATCTTACTACTGGA
ATTATACCTTCTCTTAATGTCTCTGCTGGACTTTTGGGATTCTTTTTTGTCAAGACTTGG
ACTAAATTTCTTGACAAATCTGGATTTTTGAAACAACCATTTACAAGACAAGAAAATACT
GTTATTCAGACTTGTGTTGTTGCAACTTCAGGCATAGCCTTCAGTGGAGGTTTTGGAAGC
TATCTTTTTGGCATGAGTGAAGGTATTGCTAAGCAATCAACAGAAGCAAATGCTGCAGAT
AATGTCAAGAACCCTTCTTTGGGATGGATGATAACTTTCCTCTTTGTTGTTAGCTTTCTT
GGGCTTTTCTCTGTTGTTCCGCTTCGTAAGATCATGATCATCGACTTCAAACTGATTTAT
CCGAGTGGTACTGCAACTGCTCACCTGATCAACAGTTTCCATACTCCACAAGGAGCTAAG
CTAGCCAAGAAACAAGTAAAAGCTTTGGGAAAGTTTTTCACCTTCAGCTTCTTATGGGGC
TTCTTCCAGTGGTTTTTTACAGGAGGGGATGGCTGTGGATTCGGGAGCTTTCCCACTTTT
GGTCTCAAAGCCTTCGAGAACAGGTTTTATTTTGACTTCTCCGCGACATATGTTGGTGTT
GGAATGATATGTCCATATCTAATCAACGTATCGTTGCTAGTCGGAGCAATACTTTCGTGG
GGTATAATGTGGCCTCTTATTGAAGACAGAAAAGGTCATTGGTACCCTGCTGATCAAAGT
CCTAGCAGCCTTCACGGCATACAAGGTTATAGGGTGTTTATAGCAATAGCTATGATCCTT
GGTGATGGTCTTTACAACTTCATCAAAGTACTGGGACGAACATTGTATGGTATATATTGC
CAATTCTACGAGAAAAAAACAGGTTCAGTCCTTCCTGTTGGTGCCCGTGCATCCCCTGCA
GAGGCATCTCTGTCTTATGATGATCAGATACGAACCGAGCTTTTCCTCAAGGATCAAATC
CCTACGTGGGTTGCTATAGTCGGTTATGTTAGCATTGCCATCATCTCCACGATAACGCTT
CCACACATTTTCCATCAACTTAAGTGGTACTACATCGTGGTGATATACATTTTTGCACCA
GTACTAGCCTTCTGCAATGCTTACGGATGTGGTCTGACTGACTGGTCATTGGCATCAACG
TACGGGAAGCTGGCAATCTTCACTATCGGGGCATGGGCTGGGGCTAGTCATGGTGGTGTT
CTAGCAGGATTAGCTGCTTGTGGTGTCATGATGAACATAGCCACAACTGCATCTGACTTA
ACACAAGACTTCAAGACGGGTTACATGACGTTGGCTTCTCCTAGGTCGATGTTCATAAGC
CAGATAATCGGAACAGCAATGGGGTGTGTCATTTCCCCTTGTGTATTTTGGCTATTCTAC
AAGGCGTTCCACGACTTAGGGGTTCCAGGTTCAGAGTACCCTGCACCTTACGCTATAGTC
TATCGTAACATGGCTATATTGGGAGTGGAAGGCTTCTCAGCTCTACCAAAGAATTGTCTC
ACATTATGCTACATATTCTTCATCGGAGCTATTGCAATCAACGCGTTAAGGGATGCTCTA
GGAAAGAACAAGGCAAAGTACATTCCTATTCCGATGGCAATGGCTATACCTTTCTATCTA
GGATCATACTTCACCATTGATATGTGTCTCGGAAGCCTGATTTTGTTCATCTGGACAAAG
ATAAACAAGGCTAAGGCCGATGCATTTGGACCAGCTGTCGCGTCTGGACTAATTTGTGGC
GATGGAATCTGGACCTTGCCTAGTTCAATCCTAGCTTTATCAGGTGTGAATCCGCCAATT
TGCATGAAGTTTCTATCAAGGAAGGACAATATCAGAGTAGATAAGTTCATGAAGCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400041666
PEP Infomation

pacid=37460112 transcript=PGSC0003DMT400061894 locus=PGSC0003DMG400024081 ID=PGSC0003DMT400061894.v4.03 annot-version=v4.03
Sequence

MDRSSSVSRREAHTTNGTKKTQEELLVQEEEQEVLSVERIFESKQVPSWQSQLTLRAFFV
SLILGILFTFIVMKLNLTTGIIPSLNVSAGLLGFFFVKTWTKFLDKSGFLKQPFTRQENT
VIQTCVVATSGIAFSGGFGSYLFGMSEGIAKQSTEANAADNVKNPSLGWMITFLFVVSFL
GLFSVVPLRKIMIIDFKLIYPSGTATAHLINSFHTPQGAKLAKKQVKALGKFFTFSFLWG
FFQWFFTGGDGCGFGSFPTFGLKAFENRFYFDFSATYVGVGMICPYLINVSLLVGAILSW
GIMWPLIEDRKGHWYPADQSPSSLHGIQGYRVFIAIAMILGDGLYNFIKVLGRTLYGIYC
QFYEKKTGSVLPVGARASPAEASLSYDDQIRTELFLKDQIPTWVAIVGYVSIAIISTITL
PHIFHQLKWYYIVVIYIFAPVLAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGASHGGV
LAGLAACGVMMNIATTASDLTQDFKTGYMTLASPRSMFISQIIGTAMGCVISPCVFWLFY
KAFHDLGVPGSEYPAPYAIVYRNMAILGVEGFSALPKNCLTLCYIFFIGAIAINALRDAL
GKNKAKYIPIPMAMAIPFYLGSYFTIDMCLGSLILFIWTKINKAKADAFGPAVASGLICG
DGIWTLPSSILALSGVNPPICMKFLSRKDNIRVDKFMKP*

Transcript Sequence

Transcript ID

PGSC0003DMT400061894
Transcript Infomation

pacid=37460112 locus=PGSC0003DMG400024081 ID=PGSC0003DMT400061894.v4.03 annot-version=v4.03
Sequence

ATGGATAGATCCAGTAGTGTTAGTAGAAGAGAAGCACACACAACAAATGGTACCAAAAAA
ACTCAAGAAGAATTATTAGTACAAGAAGAAGAGCAAGAAGTACTATCAGTAGAAAGGATA
TTTGAATCAAAACAAGTGCCATCATGGCAAAGTCAATTAACATTAAGGGCATTTTTTGTG
AGCTTAATATTGGGAATTTTATTTACTTTTATTGTTATGAAATTGAATCTTACTACTGGA
ATTATACCTTCTCTTAATGTCTCTGCTGGACTTTTGGGATTCTTTTTTGTCAAGACTTGG
ACTAAATTTCTTGACAAATCTGGATTTTTGAAACAACCATTTACAAGACAAGAAAATACT
GTTATTCAGACTTGTGTTGTTGCAACTTCAGGCATAGCCTTCAGTGGAGGTTTTGGAAGC
TATCTTTTTGGCATGAGTGAAGGTATTGCTAAGCAATCAACAGAAGCAAATGCTGCAGAT
AATGTCAAGAACCCTTCTTTGGGATGGATGATAACTTTCCTCTTTGTTGTTAGCTTTCTT
GGGCTTTTCTCTGTTGTTCCGCTTCGTAAGATCATGATCATCGACTTCAAACTGATTTAT
CCGAGTGGTACTGCAACTGCTCACCTGATCAACAGTTTCCATACTCCACAAGGAGCTAAG
CTAGCCAAGAAACAAGTAAAAGCTTTGGGAAAGTTTTTCACCTTCAGCTTCTTATGGGGC
TTCTTCCAGTGGTTTTTTACAGGAGGGGATGGCTGTGGATTCGGGAGCTTTCCCACTTTT
GGTCTCAAAGCCTTCGAGAACAGGTTTTATTTTGACTTCTCCGCGACATATGTTGGTGTT
GGAATGATATGTCCATATCTAATCAACGTATCGTTGCTAGTCGGAGCAATACTTTCGTGG
GGTATAATGTGGCCTCTTATTGAAGACAGAAAAGGTCATTGGTACCCTGCTGATCAAAGT
CCTAGCAGCCTTCACGGCATACAAGGTTATAGGGTGTTTATAGCAATAGCTATGATCCTT
GGTGATGGTCTTTACAACTTCATCAAAGTACTGGGACGAACATTGTATGGTATATATTGC
CAATTCTACGAGAAAAAAACAGGTTCAGTCCTTCCTGTTGGTGCCCGTGCATCCCCTGCA
GAGGCATCTCTGTCTTATGATGATCAGATACGAACCGAGCTTTTCCTCAAGGATCAAATC
CCTACGTGGGTTGCTATAGTCGGTTATGTTAGCATTGCCATCATCTCCACGATAACGCTT
CCACACATTTTCCATCAACTTAAGTGGTACTACATCGTGGTGATATACATTTTTGCACCA
GTACTAGCCTTCTGCAATGCTTACGGATGTGGTCTGACTGACTGGTCATTGGCATCAACG
TACGGGAAGCTGGCAATCTTCACTATCGGGGCATGGGCTGGGGCTAGTCATGGTGGTGTT
CTAGCAGGATTAGCTGCTTGTGGTGTCATGATGAACATAGCCACAACTGCATCTGACTTA
ACACAAGACTTCAAGACGGGTTACATGACGTTGGCTTCTCCTAGGTCGATGTTCATAAGC
CAGATAATCGGAACAGCAATGGGGTGTGTCATTTCCCCTTGTGTATTTTGGCTATTCTAC
AAGGCGTTCCACGACTTAGGGGTTCCAGGTTCAGAGTACCCTGCACCTTACGCTATAGTC
TATCGTAACATGGCTATATTGGGAGTGGAAGGCTTCTCAGCTCTACCAAAGAATTGTCTC
ACATTATGCTACATATTCTTCATCGGAGCTATTGCAATCAACGCGTTAAGGGATGCTCTA
GGAAAGAACAAGGCAAAGTACATTCCTATTCCGATGGCAATGGCTATACCTTTCTATCTA
GGATCATACTTCACCATTGATATGTGTCTCGGAAGCCTGATTTTGTTCATCTGGACAAAG
ATAAACAAGGCTAAGGCCGATGCATTTGGACCAGCTGTCGCGTCTGGACTAATTTGTGGC
GATGGAATCTGGACCTTGCCTAGTTCAATCCTAGCTTTATCAGGTGTGAATCCGCCAATT
TGCATGAAGTTTCTATCAAGGAAGGACAATATCAGAGTAGATAAGTTCATGAAGCCTTGA