Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061862
CDS Infomation

pacid=37459107 polypeptide=PGSC0003DMP400041644 locus=PGSC0003DMG400024070 ID=PGSC0003DMT400061862.v4.03 annot-version=v4.03
Sequence

ATGAAGTGTTTTACATGTTGTTTTCGTACTAATTCCAATTACAAGAAAATCATCACAAAA
AAGCCATGTAGTAATAGTAGCAACAAGATCAATAGTATCTCTCCTCAAGCTCTCCAGGAT
TTGCTCGAGACTCGCGAAAATGGTGAAGATTTTGTAGCCATTAATGGTACAAAAGAAGAA
GTTGATCACCAGGACGAGATTGTGAAATCCATTAACCTCATCGAAGAATCAAAGGGTATA
ATTAGCAGAGAGAATTTACTCGAGTTCGATGAGAATGGCGAAGCTTATGTAGACGCCATT
AATGCTAAAAAGGAAGAAGCTCGACACAAGATTGTAAACTCCATTAACCTGTTTGAAGAA
TCCAAAGACGAGGAGGAAGAAGAAGAGTTGAATAAAAGCAATATAAAGAATTTGCTCGAG
AGACGCAAAAATGATGAGGGCTTATTATCAAAACAAGTTTCTGCAAATTGCTCAGAGTAT
CTGAGCAATTTGCAGAAACATAACGGAGAAGAAGAAGAAGAAGTGGACACGGTTTCAAAT
TCAAGTGTGTCAAGCTATATATCTTATCCTCAAAATCATCGATATCATTGCTGCAGAAAC
AGCAATGATGAATTCGAAGATATTGATCTCGAAGATGAAGCTAACAATAATGATGATGGA
AATGAAATGATTCTTCAAGAGTCGTCTTACGAGTCATTATTTTCACTCTCCATAGACGAC
TCCACTCGGAATGGAAATAATCCCTTCCCCGAAATCATGTATGACAAGGAGGAGGTCAAC
AGTCCATTGAAACCTATGTTGCTCAGACGTTTCAAAAATGCTGACAGACTTGTAACGGAT
CCTCAAGAAGTAGTGCATTTTCAACACGGGTGTGACAACAATTTTGAAGAGTCAGAGCAA
CATAGATTACTAGTGTTGAATCCAATTCGAAATCCATGTCTATTGAAAGACACCGGCATT
ACAACGCCTCCATCACTATTGAATCAACAAGAGGAGAAGGAGAACATTGATATGAATCTT
CTTGATTTTAGTACCACGTATAATCGTGCAAAAGACGAGCCTAGTTTGAAGCGCCAAGAG
AATGAAATCGCGGTTGATGCTAGTCTTTCGAGCTGGTTAGTTGAATGTTCTCAAGACGAC
ACGCCAAATTCTAAAAACAGTGTTGGTTCTGTCGGAAATTCACATTCAGAGAAACGCGTA
GGGCTTATCGATAGACCAATTTTAGGAGCATTGACAGTAGAAGAGCTCAAAGATGAAAAG
CCCATTGTAATAGGGACTATTGGGAGCTATTTGAGACATACAGGGCAAGCTAATAGCATT
TCATCTTACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400041644
PEP Infomation

pacid=37459107 transcript=PGSC0003DMT400061862 locus=PGSC0003DMG400024070 ID=PGSC0003DMT400061862.v4.03 annot-version=v4.03
Sequence

MKCFTCCFRTNSNYKKIITKKPCSNSSNKINSISPQALQDLLETRENGEDFVAINGTKEE
VDHQDEIVKSINLIEESKGIISRENLLEFDENGEAYVDAINAKKEEARHKIVNSINLFEE
SKDEEEEEELNKSNIKNLLERRKNDEGLLSKQVSANCSEYLSNLQKHNGEEEEEVDTVSN
SSVSSYISYPQNHRYHCCRNSNDEFEDIDLEDEANNNDDGNEMILQESSYESLFSLSIDD
STRNGNNPFPEIMYDKEEVNSPLKPMLLRRFKNADRLVTDPQEVVHFQHGCDNNFEESEQ
HRLLVLNPIRNPCLLKDTGITTPPSLLNQQEEKENIDMNLLDFSTTYNRAKDEPSLKRQE
NEIAVDASLSSWLVECSQDDTPNSKNSVGSVGNSHSEKRVGLIDRPILGALTVEELKDEK
PIVIGTIGSYLRHTGQANSISSY*

Transcript Sequence

Transcript ID

PGSC0003DMT400061862
Transcript Infomation

pacid=37459107 locus=PGSC0003DMG400024070 ID=PGSC0003DMT400061862.v4.03 annot-version=v4.03
Sequence

ATGAAGTGTTTTACATGTTGTTTTCGTACTAATTCCAATTACAAGAAAATCATCACAAAA
AAGCCATGTAGTAATAGTAGCAACAAGATCAATAGTATCTCTCCTCAAGCTCTCCAGGAT
TTGCTCGAGACTCGCGAAAATGGTGAAGATTTTGTAGCCATTAATGGTACAAAAGAAGAA
GTTGATCACCAGGACGAGATTGTGAAATCCATTAACCTCATCGAAGAATCAAAGGGTATA
ATTAGCAGAGAGAATTTACTCGAGTTCGATGAGAATGGCGAAGCTTATGTAGACGCCATT
AATGCTAAAAAGGAAGAAGCTCGACACAAGATTGTAAACTCCATTAACCTGTTTGAAGAA
TCCAAAGACGAGGAGGAAGAAGAAGAGTTGAATAAAAGCAATATAAAGAATTTGCTCGAG
AGACGCAAAAATGATGAGGGCTTATTATCAAAACAAGTTTCTGCAAATTGCTCAGAGTAT
CTGAGCAATTTGCAGAAACATAACGGAGAAGAAGAAGAAGAAGTGGACACGGTTTCAAAT
TCAAGTGTGTCAAGCTATATATCTTATCCTCAAAATCATCGATATCATTGCTGCAGAAAC
AGCAATGATGAATTCGAAGATATTGATCTCGAAGATGAAGCTAACAATAATGATGATGGA
AATGAAATGATTCTTCAAGAGTCGTCTTACGAGTCATTATTTTCACTCTCCATAGACGAC
TCCACTCGGAATGGAAATAATCCCTTCCCCGAAATCATGTATGACAAGGAGGAGGTCAAC
AGTCCATTGAAACCTATGTTGCTCAGACGTTTCAAAAATGCTGACAGACTTGTAACGGAT
CCTCAAGAAGTAGTGCATTTTCAACACGGGTGTGACAACAATTTTGAAGAGTCAGAGCAA
CATAGATTACTAGTGTTGAATCCAATTCGAAATCCATGTCTATTGAAAGACACCGGCATT
ACAACGCCTCCATCACTATTGAATCAACAAGAGGAGAAGGAGAACATTGATATGAATCTT
CTTGATTTTAGTACCACGTATAATCGTGCAAAAGACGAGCCTAGTTTGAAGCGCCAAGAG
AATGAAATCGCGGTTGATGCTAGTCTTTCGAGCTGGTTAGTTGAATGTTCTCAAGACGAC
ACGCCAAATTCTAAAAACAGTGTTGGTTCTGTCGGAAATTCACATTCAGAGAAACGCGTA
GGGCTTATCGATAGACCAATTTTAGGAGCATTGACAGTAGAAGAGCTCAAAGATGAAAAG
CCCATTGTAATAGGGACTATTGGGAGCTATTTGAGACATACAGGGCAAGCTAATAGCATT
TCATCTTACTGA