Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061847
CDS Infomation

pacid=37459385 polypeptide=PGSC0003DMP400041630 locus=PGSC0003DMG400024064 ID=PGSC0003DMT400061847.v4.03 annot-version=v4.03
Sequence

ATGGATAATTTACCAAAATGTGGAGCAAATTATGTGTCCCTAACTCCTCTTACCTTCTTA
ACAAGGGCCTCAAAATGTTATGCCAATAGAACCTCTATCATCTATGGCAATGCCCGTTTC
ACATGGAGGCAAACCTACGAGCGTTGTTGTCGCGTTGCTTCCTCTCTTCGATCTCTTAAC
ATTGTCAAGAACGACGTGGTTTCAGTGTTGGCACCAAATGTTCCAGCAATATATGAGATG
CATTTTGCTGTGCCAATGGCAGGGGCTGTATTGAATACAATAAATACAAGGCTAGATGCT
AAGAATATTGCAATTATTCTCAAACACTCTGAAGCCAAAGTATTTTTTGTTGATTTTGAG
TACCTTGAAATTGCTAAAAAGGCCCTTGAACTACTAGCAACATCCAAAATGACAAGAATA
CCCCTCGTCGTTGTTATCGATGACATCGACTCCCCTACCGGAATCCGGCTAGGTGAGCTC
GAGTACGAGCAACTCGTGCACCAAGGAAATCCGAGTTACGTCCCCGAAGAAATCACCGAT
GAATGGGATCCAATCACCTTGAATTATACATCAGGTACGACTTCGGAGCCTAAGGGGGTT
GTGTATAGTCATAGAGGGGCATTTTTGAGCACTTTGAGCCTACTATTAGGTTGGGAAATG
GGTACTGAGCCAGTGTACTTATGGTCTTTACCAATGTTCCATTGCAATGGATGGACATTC
ACATGGGGTGTAGCAGCACGTGGTGGGACAAATATTTGTATTAGAAACACAACTGCCAAA
GAAATGTACACAAACATTGTGTTACATAATGTTACACACATGTGTTGTGCACCTATTGTT
TTCAACATCTTACTTGAAGCCAAGCCACATGATGAGTACTCCAAACCCATAACCACACGT
GTCCAAATCCTCACGGGCGGCGCACCGCCACCCGCACCTCTTCTCGAGAAAATCGAGAAG
CTGGGATTCCACGTGGTCCATGCTTACGGGCTCACAGAGGCAACCGGGCCGGCCCTCTTG
TGCGAATGGCAAGAGAAATGGAACAAATTACCTAGTGAAAATCAAGCTAAGTTGAAATCG
AGACAAGGGGTTAGTATACTAACCCTAGCCGATGTCGATGTGAAAAATATCGACAACATG
CTTAGCGTGCCACGTGACGGAAAATCAATCGGAGAAGTGTGCTTGCGCGGGAGCAGTATT
ATGAAAGGGTATTACAAGAACGATAAGGCGAATTACGAGGTTTTTAAAAATGGTTGGTTT
TTTACTGGTGATGTTGGTGTAATTCACCAAGATGGATATTTGGAAATTAAAGATAGGAGT
AAAGATGTTATAATTTCTGGTGGAGAAAATATTAGTAGTATTGAAGTTGAAAATGTTATA
ATGAAACATAAAAATGTTGTAGAGGCATCTGTTGTGGCTATGCCACATCCAAAATGGGGT
GAAAGTCCATGTGCATTTGTGATTTTGACAAAAAATTCACAAATTAAAGAAGTGGATATT
ATTGGACATTGTAGATCAAATTTGCCAGGATTTATGGTACCAAAAAAGGTGAAATTTGTT
GAAGAATTACCCAAGACTGGAACAGGAAAAGTGCAAAAAAATCATTTGAGAACAATTGCT
AAAACATTTGTTGTTGTCACAGAAAAGTCAAATCATCAAAAAAGCAAAAATACAAGTCAA
GTCAACAGAGAAAAGCCAAGATATTATGAGCAAATTCTTGCCTTGTCTCGTCTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400041630
PEP Infomation

pacid=37459385 transcript=PGSC0003DMT400061847 locus=PGSC0003DMG400024064 ID=PGSC0003DMT400061847.v4.03 annot-version=v4.03
Sequence

MDNLPKCGANYVSLTPLTFLTRASKCYANRTSIIYGNARFTWRQTYERCCRVASSLRSLN
IVKNDVVSVLAPNVPAIYEMHFAVPMAGAVLNTINTRLDAKNIAIILKHSEAKVFFVDFE
YLEIAKKALELLATSKMTRIPLVVVIDDIDSPTGIRLGELEYEQLVHQGNPSYVPEEITD
EWDPITLNYTSGTTSEPKGVVYSHRGAFLSTLSLLLGWEMGTEPVYLWSLPMFHCNGWTF
TWGVAARGGTNICIRNTTAKEMYTNIVLHNVTHMCCAPIVFNILLEAKPHDEYSKPITTR
VQILTGGAPPPAPLLEKIEKLGFHVVHAYGLTEATGPALLCEWQEKWNKLPSENQAKLKS
RQGVSILTLADVDVKNIDNMLSVPRDGKSIGEVCLRGSSIMKGYYKNDKANYEVFKNGWF
FTGDVGVIHQDGYLEIKDRSKDVIISGGENISSIEVENVIMKHKNVVEASVVAMPHPKWG
ESPCAFVILTKNSQIKEVDIIGHCRSNLPGFMVPKKVKFVEELPKTGTGKVQKNHLRTIA
KTFVVVTEKSNHQKSKNTSQVNREKPRYYEQILALSRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400061847
Transcript Infomation

pacid=37459385 locus=PGSC0003DMG400024064 ID=PGSC0003DMT400061847.v4.03 annot-version=v4.03
Sequence

ATGGATAATTTACCAAAATGTGGAGCAAATTATGTGTCCCTAACTCCTCTTACCTTCTTA
ACAAGGGCCTCAAAATGTTATGCCAATAGAACCTCTATCATCTATGGCAATGCCCGTTTC
ACATGGAGGCAAACCTACGAGCGTTGTTGTCGCGTTGCTTCCTCTCTTCGATCTCTTAAC
ATTGTCAAGAACGACGTGGTTTCAGTGTTGGCACCAAATGTTCCAGCAATATATGAGATG
CATTTTGCTGTGCCAATGGCAGGGGCTGTATTGAATACAATAAATACAAGGCTAGATGCT
AAGAATATTGCAATTATTCTCAAACACTCTGAAGCCAAAGTATTTTTTGTTGATTTTGAG
TACCTTGAAATTGCTAAAAAGGCCCTTGAACTACTAGCAACATCCAAAATGACAAGAATA
CCCCTCGTCGTTGTTATCGATGACATCGACTCCCCTACCGGAATCCGGCTAGGTGAGCTC
GAGTACGAGCAACTCGTGCACCAAGGAAATCCGAGTTACGTCCCCGAAGAAATCACCGAT
GAATGGGATCCAATCACCTTGAATTATACATCAGGTACGACTTCGGAGCCTAAGGGGGTT
GTGTATAGTCATAGAGGGGCATTTTTGAGCACTTTGAGCCTACTATTAGGTTGGGAAATG
GGTACTGAGCCAGTGTACTTATGGTCTTTACCAATGTTCCATTGCAATGGATGGACATTC
ACATGGGGTGTAGCAGCACGTGGTGGGACAAATATTTGTATTAGAAACACAACTGCCAAA
GAAATGTACACAAACATTGTGTTACATAATGTTACACACATGTGTTGTGCACCTATTGTT
TTCAACATCTTACTTGAAGCCAAGCCACATGATGAGTACTCCAAACCCATAACCACACGT
GTCCAAATCCTCACGGGCGGCGCACCGCCACCCGCACCTCTTCTCGAGAAAATCGAGAAG
CTGGGATTCCACGTGGTCCATGCTTACGGGCTCACAGAGGCAACCGGGCCGGCCCTCTTG
TGCGAATGGCAAGAGAAATGGAACAAATTACCTAGTGAAAATCAAGCTAAGTTGAAATCG
AGACAAGGGGTTAGTATACTAACCCTAGCCGATGTCGATGTGAAAAATATCGACAACATG
CTTAGCGTGCCACGTGACGGAAAATCAATCGGAGAAGTGTGCTTGCGCGGGAGCAGTATT
ATGAAAGGGTATTACAAGAACGATAAGGCGAATTACGAGGTTTTTAAAAATGGTTGGTTT
TTTACTGGTGATGTTGGTGTAATTCACCAAGATGGATATTTGGAAATTAAAGATAGGAGT
AAAGATGTTATAATTTCTGGTGGAGAAAATATTAGTAGTATTGAAGTTGAAAATGTTATA
ATGAAACATAAAAATGTTGTAGAGGCATCTGTTGTGGCTATGCCACATCCAAAATGGGGT
GAAAGTCCATGTGCATTTGTGATTTTGACAAAAAATTCACAAATTAAAGAAGTGGATATT
ATTGGACATTGTAGATCAAATTTGCCAGGATTTATGGTACCAAAAAAGGTGAAATTTGTT
GAAGAATTACCCAAGACTGGAACAGGAAAAGTGCAAAAAAATCATTTGAGAACAATTGCT
AAAACATTTGTTGTTGTCACAGAAAAGTCAAATCATCAAAAAAGCAAAAATACAAGTCAA
GTCAACAGAGAAAAGCCAAGATATTATGAGCAAATTCTTGCCTTGTCTCGTCTATAA