Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061831
CDS Infomation

pacid=37436581 polypeptide=PGSC0003DMP400041617 locus=PGSC0003DMG400024055 ID=PGSC0003DMT400061831.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTACTTGTACTCAAAATTGGAAGAATGATGTTTTCTTGAGTTTTAGAGGTGAA
GATACGCGTAAAACTTTTGTTGGTCATCTCTACTATGCTCTAAAACAAAAAGGAATTCAT
ACATTCAAAGATGATGAAAGATTGGAAAGAGGAAAATCAATTTCACCTGAACTTGTTAAA
GCTATTGAAGAATCAAGATTTGCTATTGTTGTATTCTCTAAGAATTATGCATCATCCACT
TGGTGTTTAGATGAACTTGGGAAGATCATGGAATGTAAAAAAGATTTTGGACAAACTGTG
ATACCTATATTCTATGATGTAGATCCATCACATGTAACTAAACAAAGTGAAAGTTTTGCT
AAATCATTTGCTACACATGAGGAAAATTTGAAAGATGATGTTGAGAAGGTGTTATGCTGG
AGGGATGCATTTCGTCAAGCAGGCAAAATAGCTGGATATGATTTGCCGAAAGGCTACGAC
GGGCATGAATCTCTTTGCATTCAGCATGTTGTTGAAGGCATACTGAGTAAATTATGTCAA
GTTATTTCAACCATTGAAAATGATTTGGTGGGGATGGAATCTCGAGTGCAGGAAGTAAGT
TCATTACTAAGGATGGAAACACGCAATGTTCGTTTTATTGGTATTTGGGGGATGGGCGGC
ATTGGTAAGACAACAATTGCAAGTGCTGTGTTTGGCAAATATTCGGGCCAATTTGAAGGT
GTTTGTTTTCTTGATAATGTTGTGGAAATGCAAAGGACACGTGGACTGCAATATCTGCAA
GGTGTTCTCCTCTCGAAAATCCTCAAAGTAAGTTTAACTATAGCAAGTGTGTATGAAGGC
ATGAGAATCATAAAGGAGAGGCTACGCTCAATGAAAGTTTTGATCATTCTTGATGATGTA
AATCAAAAGGACCAATTAGAAATGTTAGTTGGAGGGCATGACTGGTTTGGTATCGGCAGT
AGAATTTTGATTACAACAACAGATAAACACTTGTTACATAATCATGTGGTGGATGAAGTG
TATTCAGTCAACTTGATGACTCGCGATGAAGCAATAGAGCTATTCAGCCTACACGCCTTT
AAGCAAAGAATTCCAGATAAAGATTTTGAGGAGCTAATAAATCAAGTTGTACAGAATGCC
GGTTTTCTCCCTTTAGCTCTGAAAATTCTAGGTTCGTCTCTCTACGGGCTAGACAAGATT
GAGTGGAAATGCACAGTGGACAGACTCAAGGATATGCCAGATCATGTTCTTGCTAAGCTT
AAGATAAGTTTTGATGGGCTGAGTCCTTCTGATCAGAGACTATTTCTTGATATCGGATGC
TTTTATAGAGGAAAATTGAGGAGTTATGTAGAGGAAATTCTTGAGAGTTGTGATATTGGA
TCTACAATAAGAGTCTTGATTGAAAAGTCTCTCTTATTTGTCTCACCATATGACACAATC
GAGATGCATGATTTGATACAAGAAATGGCCTGGCACATCGTGAGACTAGGTGACACAAGA
AGGAGCAGAATATGGCTTCCCGAGGACATCGAGGATTTGTTTACTGGAAATTTGGAGGCA
GAAGCTGTGGAGGGCCTATCGATCCCAAGGGATTACATACGAAAACAGGATATATCATAT
TACAACATAAATGAAACATTCAGGAAAATGAAAAGATTAAGGGTGCTTGAAGTCAGAGCA
ACAAATTTCTGCTCTATTGATCCGATCACTCATCTTCCTAGCAGCATAAGGTGGCTTGAT
TGGGAAGGTTGCCCTCTAAATTCATTGCCACAGAGTTTTGAACCTTCAAAGCTTCTTCGT
CTCGATATACTTGAAAGTACTACAATTCAGAAGCTCTGGTCAATTTCAAAGGGATTGGAC
AAACTTAAAACTTTGTACCTCAGCTACTGTGAGAACTTGGAAGAAGTTCCAAGCTTTGAT
ATGATGCCAAATTTAGAGAGAGTAAAGCTAGAGGGATGTAACAGTTTGAGAGAAGTCAGC
CCATCTTTTGGAGTTCTCATGAAACTCACTTCAATGGAGCTAATTGATTGTCCAAGCCTC
GAGAAGCTTCCAAGTTGTATTGAGATGGGATCCCTTAAGAGTCTCAAACTTTCTTGTCTT
CCAAAATTAAGGGAATTGCCAGAAACCAAGGGGATGCACCGTTTATTGAGGTTAGAGCTG
ACTAACTGTCAATACCTTGAGAAGCTTCCAAATTTTGATCAGATGGAATCCCTTGAGACT
CTCAAACTTTCTTGTCTTCCGAAAGTAACTACATTTCCGCCACCTGACGGGATGCACTGT
TTACAGGACATTGTTATAGAATATGTTCCGATAGTAGAGCTTCCAGCATCAATCGGGAAT
CTTCGTTCCCTCAAACAACTAAGATTAAGTCATTGTAAAGATCTGGTAAGCATTCCAAAC
AGCTTTTGTTGTCTGAAGAATCTAAGAGCTCTTCTGATCTACAGCTGCAAAAGACTAATC
TATTTGCCAGAAAAGATTGGTGACTTGAAACTGTTGAAGAAGCTAGTAGTATCTGGTACT
TCAATTTCCCGGATACCACCTTCAGTTACAGATCTTGGTGAACTAAACTTCTTATCGTTC
TCTCGTTGGTCTGGATACAGACAAGGTGCAACTTTTCTGTTCCCCCCTGCATCAGGTGAA
TCATCGTCATTGAGGGTGTTAAAACTAAATAAAAACAGGTTATGTAGTGCTGAACATTTT
CAGGATGTTGGAGGTTTATCTTCTTTGGCTCACTTGGATTTGACTAGAAATGATGAGAGC
ACCAATCAACTCTTTCATTACTTAGACATAACATTTTGTGAGAAGCTTGCGTTGCCCGAA
CTTCCGCCATGTATAAAGGAGTTATATGCATGTGATCCTTTAATCTTGAAAAGCATCCCT
GATTTCCTTACCAAATATTCAGAGCTCTATTCAGTGTCATTCACGCGGCATATCGAGAAC
AAAGGTGAACTGACTGATATGTTGCTTTTTGTCCTCCGCGTGATTAGTGTGGCATCTCAG
TGTGAGAAAAGGCCGCCATTTAGCCTTTTCTTCCCTGGAGATATAAAATGGAAATGGTTC
ACTTATTATCGGAAAGAACAAACGAAAAGATTCTCCATTCAACTTGATCCACGTTGGTAC
GAAAGTAAATTCAAAGGATTTGTTATATGCTTTCGTGTACCATCGGTTATTGGTCAGAAC
CTGAAACCTTCAGATGGTAAATCACAACGAGGAAGTAGTCGTAGGTTCGGATGCACTAAG
GTTACTGCTAAGTTAGTGCAAAGACATAACAGGCAAGAACATGATGTACTCCAGAAAAAA
TGTCTGATCGTTGCTCGCCAAACATTTTGCTCTCACGGTAGTAAATACGCCATTTGTTTT
AGCTACATACCTTTTGTAGCATGTGAGAAAGGGAAGAAGCTGCTAAATGAGTATTGCTTC
TTAGAGGCATCGATAGAACCAGACATTGCAACAAAATGGGGACTTCTTCTGGTGTATGAG
AATAAAATTCAACAGATAGATCAATCAGCCATCGCGGTCCAATGTGATGTTGATTCTCGG
AATTCTGACCTGTTTAGAGAATGTAATGATGACCAAGGCCAGAGAATAGAGGATGCTTCT
GTTAAGAGAAGACGTCTTGATCTTCGTCAAGTGATGAAGGATTCGTGCTCCACCAGTATA
GTTCCTGATCAACAAATGGAAACACCAAGCTCTTCTGCAGCACAAAGTTTCCAGCATAGG
GAAGAGTCATGCTCTTCAGGACAGCCCCAAACTAGACAGCTCCCTTTAACTGATCCGCGA
GTTGATGAAGCAATAGATGAGGATACCTCATGCATTGTAATTGAACAGCCTGATGTTTTT
GAAGTCTCTCTAGATGAGCACAAAGATAATTCAATGACAACTGGTTCTGGCTGCTCTGAA
GTATCCCAACAATTGGAGACACAATGCACTTCTGGACAATCTCAAACTCTCCGGCTCTTC
CCCGATCATTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400041617
PEP Infomation

pacid=37436581 transcript=PGSC0003DMT400061831 locus=PGSC0003DMG400024055 ID=PGSC0003DMT400061831.v4.03 annot-version=v4.03
Sequence

MSSTCTQNWKNDVFLSFRGEDTRKTFVGHLYYALKQKGIHTFKDDERLERGKSISPELVK
AIEESRFAIVVFSKNYASSTWCLDELGKIMECKKDFGQTVIPIFYDVDPSHVTKQSESFA
KSFATHEENLKDDVEKVLCWRDAFRQAGKIAGYDLPKGYDGHESLCIQHVVEGILSKLCQ
VISTIENDLVGMESRVQEVSSLLRMETRNVRFIGIWGMGGIGKTTIASAVFGKYSGQFEG
VCFLDNVVEMQRTRGLQYLQGVLLSKILKVSLTIASVYEGMRIIKERLRSMKVLIILDDV
NQKDQLEMLVGGHDWFGIGSRILITTTDKHLLHNHVVDEVYSVNLMTRDEAIELFSLHAF
KQRIPDKDFEELINQVVQNAGFLPLALKILGSSLYGLDKIEWKCTVDRLKDMPDHVLAKL
KISFDGLSPSDQRLFLDIGCFYRGKLRSYVEEILESCDIGSTIRVLIEKSLLFVSPYDTI
EMHDLIQEMAWHIVRLGDTRRSRIWLPEDIEDLFTGNLEAEAVEGLSIPRDYIRKQDISY
YNINETFRKMKRLRVLEVRATNFCSIDPITHLPSSIRWLDWEGCPLNSLPQSFEPSKLLR
LDILESTTIQKLWSISKGLDKLKTLYLSYCENLEEVPSFDMMPNLERVKLEGCNSLREVS
PSFGVLMKLTSMELIDCPSLEKLPSCIEMGSLKSLKLSCLPKLRELPETKGMHRLLRLEL
TNCQYLEKLPNFDQMESLETLKLSCLPKVTTFPPPDGMHCLQDIVIEYVPIVELPASIGN
LRSLKQLRLSHCKDLVSIPNSFCCLKNLRALLIYSCKRLIYLPEKIGDLKLLKKLVVSGT
SISRIPPSVTDLGELNFLSFSRWSGYRQGATFLFPPASGESSSLRVLKLNKNRLCSAEHF
QDVGGLSSLAHLDLTRNDESTNQLFHYLDITFCEKLALPELPPCIKELYACDPLILKSIP
DFLTKYSELYSVSFTRHIENKGELTDMLLFVLRVISVASQCEKRPPFSLFFPGDIKWKWF
TYYRKEQTKRFSIQLDPRWYESKFKGFVICFRVPSVIGQNLKPSDGKSQRGSSRRFGCTK
VTAKLVQRHNRQEHDVLQKKCLIVARQTFCSHGSKYAICFSYIPFVACEKGKKLLNEYCF
LEASIEPDIATKWGLLLVYENKIQQIDQSAIAVQCDVDSRNSDLFRECNDDQGQRIEDAS
VKRRRLDLRQVMKDSCSTSIVPDQQMETPSSSAAQSFQHREESCSSGQPQTRQLPLTDPR
VDEAIDEDTSCIVIEQPDVFEVSLDEHKDNSMTTGSGCSEVSQQLETQCTSGQSQTLRLF
PDHS*

Transcript Sequence

Transcript ID

PGSC0003DMT400061831
Transcript Infomation

pacid=37436581 locus=PGSC0003DMG400024055 ID=PGSC0003DMT400061831.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTACTTGTACTCAAAATTGGAAGAATGATGTTTTCTTGAGTTTTAGAGGTGAA
GATACGCGTAAAACTTTTGTTGGTCATCTCTACTATGCTCTAAAACAAAAAGGAATTCAT
ACATTCAAAGATGATGAAAGATTGGAAAGAGGAAAATCAATTTCACCTGAACTTGTTAAA
GCTATTGAAGAATCAAGATTTGCTATTGTTGTATTCTCTAAGAATTATGCATCATCCACT
TGGTGTTTAGATGAACTTGGGAAGATCATGGAATGTAAAAAAGATTTTGGACAAACTGTG
ATACCTATATTCTATGATGTAGATCCATCACATGTAACTAAACAAAGTGAAAGTTTTGCT
AAATCATTTGCTACACATGAGGAAAATTTGAAAGATGATGTTGAGAAGGTGTTATGCTGG
AGGGATGCATTTCGTCAAGCAGGCAAAATAGCTGGATATGATTTGCCGAAAGGCTACGAC
GGGCATGAATCTCTTTGCATTCAGCATGTTGTTGAAGGCATACTGAGTAAATTATGTCAA
GTTATTTCAACCATTGAAAATGATTTGGTGGGGATGGAATCTCGAGTGCAGGAAGTAAGT
TCATTACTAAGGATGGAAACACGCAATGTTCGTTTTATTGGTATTTGGGGGATGGGCGGC
ATTGGTAAGACAACAATTGCAAGTGCTGTGTTTGGCAAATATTCGGGCCAATTTGAAGGT
GTTTGTTTTCTTGATAATGTTGTGGAAATGCAAAGGACACGTGGACTGCAATATCTGCAA
GGTGTTCTCCTCTCGAAAATCCTCAAAGTAAGTTTAACTATAGCAAGTGTGTATGAAGGC
ATGAGAATCATAAAGGAGAGGCTACGCTCAATGAAAGTTTTGATCATTCTTGATGATGTA
AATCAAAAGGACCAATTAGAAATGTTAGTTGGAGGGCATGACTGGTTTGGTATCGGCAGT
AGAATTTTGATTACAACAACAGATAAACACTTGTTACATAATCATGTGGTGGATGAAGTG
TATTCAGTCAACTTGATGACTCGCGATGAAGCAATAGAGCTATTCAGCCTACACGCCTTT
AAGCAAAGAATTCCAGATAAAGATTTTGAGGAGCTAATAAATCAAGTTGTACAGAATGCC
GGTTTTCTCCCTTTAGCTCTGAAAATTCTAGGTTCGTCTCTCTACGGGCTAGACAAGATT
GAGTGGAAATGCACAGTGGACAGACTCAAGGATATGCCAGATCATGTTCTTGCTAAGCTT
AAGATAAGTTTTGATGGGCTGAGTCCTTCTGATCAGAGACTATTTCTTGATATCGGATGC
TTTTATAGAGGAAAATTGAGGAGTTATGTAGAGGAAATTCTTGAGAGTTGTGATATTGGA
TCTACAATAAGAGTCTTGATTGAAAAGTCTCTCTTATTTGTCTCACCATATGACACAATC
GAGATGCATGATTTGATACAAGAAATGGCCTGGCACATCGTGAGACTAGGTGACACAAGA
AGGAGCAGAATATGGCTTCCCGAGGACATCGAGGATTTGTTTACTGGAAATTTGGAGGCA
GAAGCTGTGGAGGGCCTATCGATCCCAAGGGATTACATACGAAAACAGGATATATCATAT
TACAACATAAATGAAACATTCAGGAAAATGAAAAGATTAAGGGTGCTTGAAGTCAGAGCA
ACAAATTTCTGCTCTATTGATCCGATCACTCATCTTCCTAGCAGCATAAGGTGGCTTGAT
TGGGAAGGTTGCCCTCTAAATTCATTGCCACAGAGTTTTGAACCTTCAAAGCTTCTTCGT
CTCGATATACTTGAAAGTACTACAATTCAGAAGCTCTGGTCAATTTCAAAGGGATTGGAC
AAACTTAAAACTTTGTACCTCAGCTACTGTGAGAACTTGGAAGAAGTTCCAAGCTTTGAT
ATGATGCCAAATTTAGAGAGAGTAAAGCTAGAGGGATGTAACAGTTTGAGAGAAGTCAGC
CCATCTTTTGGAGTTCTCATGAAACTCACTTCAATGGAGCTAATTGATTGTCCAAGCCTC
GAGAAGCTTCCAAGTTGTATTGAGATGGGATCCCTTAAGAGTCTCAAACTTTCTTGTCTT
CCAAAATTAAGGGAATTGCCAGAAACCAAGGGGATGCACCGTTTATTGAGGTTAGAGCTG
ACTAACTGTCAATACCTTGAGAAGCTTCCAAATTTTGATCAGATGGAATCCCTTGAGACT
CTCAAACTTTCTTGTCTTCCGAAAGTAACTACATTTCCGCCACCTGACGGGATGCACTGT
TTACAGGACATTGTTATAGAATATGTTCCGATAGTAGAGCTTCCAGCATCAATCGGGAAT
CTTCGTTCCCTCAAACAACTAAGATTAAGTCATTGTAAAGATCTGGTAAGCATTCCAAAC
AGCTTTTGTTGTCTGAAGAATCTAAGAGCTCTTCTGATCTACAGCTGCAAAAGACTAATC
TATTTGCCAGAAAAGATTGGTGACTTGAAACTGTTGAAGAAGCTAGTAGTATCTGGTACT
TCAATTTCCCGGATACCACCTTCAGTTACAGATCTTGGTGAACTAAACTTCTTATCGTTC
TCTCGTTGGTCTGGATACAGACAAGGTGCAACTTTTCTGTTCCCCCCTGCATCAGGTGAA
TCATCGTCATTGAGGGTGTTAAAACTAAATAAAAACAGGTTATGTAGTGCTGAACATTTT
CAGGATGTTGGAGGTTTATCTTCTTTGGCTCACTTGGATTTGACTAGAAATGATGAGAGC
ACCAATCAACTCTTTCATTACTTAGACATAACATTTTGTGAGAAGCTTGCGTTGCCCGAA
CTTCCGCCATGTATAAAGGAGTTATATGCATGTGATCCTTTAATCTTGAAAAGCATCCCT
GATTTCCTTACCAAATATTCAGAGCTCTATTCAGTGTCATTCACGCGGCATATCGAGAAC
AAAGGTGAACTGACTGATATGTTGCTTTTTGTCCTCCGCGTGATTAGTGTGGCATCTCAG
TGTGAGAAAAGGCCGCCATTTAGCCTTTTCTTCCCTGGAGATATAAAATGGAAATGGTTC
ACTTATTATCGGAAAGAACAAACGAAAAGATTCTCCATTCAACTTGATCCACGTTGGTAC
GAAAGTAAATTCAAAGGATTTGTTATATGCTTTCGTGTACCATCGGTTATTGGTCAGAAC
CTGAAACCTTCAGATGGTAAATCACAACGAGGAAGTAGTCGTAGGTTCGGATGCACTAAG
GTTACTGCTAAGTTAGTGCAAAGACATAACAGGCAAGAACATGATGTACTCCAGAAAAAA
TGTCTGATCGTTGCTCGCCAAACATTTTGCTCTCACGGTAGTAAATACGCCATTTGTTTT
AGCTACATACCTTTTGTAGCATGTGAGAAAGGGAAGAAGCTGCTAAATGAGTATTGCTTC
TTAGAGGCATCGATAGAACCAGACATTGCAACAAAATGGGGACTTCTTCTGGTGTATGAG
AATAAAATTCAACAGATAGATCAATCAGCCATCGCGGTCCAATGTGATGTTGATTCTCGG
AATTCTGACCTGTTTAGAGAATGTAATGATGACCAAGGCCAGAGAATAGAGGATGCTTCT
GTTAAGAGAAGACGTCTTGATCTTCGTCAAGTGATGAAGGATTCGTGCTCCACCAGTATA
GTTCCTGATCAACAAATGGAAACACCAAGCTCTTCTGCAGCACAAAGTTTCCAGCATAGG
GAAGAGTCATGCTCTTCAGGACAGCCCCAAACTAGACAGCTCCCTTTAACTGATCCGCGA
GTTGATGAAGCAATAGATGAGGATACCTCATGCATTGTAATTGAACAGCCTGATGTTTTT
GAAGTCTCTCTAGATGAGCACAAAGATAATTCAATGACAACTGGTTCTGGCTGCTCTGAA
GTATCCCAACAATTGGAGACACAATGCACTTCTGGACAATCTCAAACTCTCCGGCTCTTC
CCCGATCATTCATGA