Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061821
CDS Infomation

pacid=37451431 polypeptide=PGSC0003DMP400041608 locus=PGSC0003DMG400024049 ID=PGSC0003DMT400061821.v4.03 annot-version=v4.03
Sequence

ATGGTGGGGAAAATAGTGGTTTCTTTGGTATCGTTGTTTCTTGTGGTGGGTGTCGTATTG
GGAGTGGCGATCGTGGTGCACAAAGGGTCGGGACAAAATCCGAAAGTCCAAATGAAGGCA
TCGATTGTGGAGTTCTGTAAACCTGCGGAATTCGAAATAGCTTGTTTTAAGAGCCTTGAT
GCAGTGTCTAAGAACGATAGTGCTACGATGAAAGACTACCTGTTAGCTTCGTTGCAAGTG
ACAGGGGATGAAATAAAGAAATCTTTAGCGGTGGTGGAAAAGGGTAGTCCTATCGATAAT
AAAACAGATCCGTACAATCACATGGCAGTAGAGGATTGCAAAGAGTTGTTGCAATATGCG
GTGGAGGAACTCCACGACTCCTACTCTATGGTTGGGGATACCGCATTGCATTCCCTTGGG
GATCGTGTAAGCGAACTATTGAACTGGCTCGGTGCGGTCTACTCCTATCAAAGCATGTGT
CTCGATGGTATAATCGATAAGCCTGATTACAAAGAAGCCTTAGAAAATGGCATGCGGAAT
GCAACCCAACTCACACACAATGCAATCAACATTGTAGCAAAGATTTCAACCGTCCTCCAA
GCCTTCAACATCTCAAGCACCATAACTACATCAACATCTAGTCATCGTCGCCTCCTTGGT
TACCCTACCTGGTTCCCTGTTGCCGACCGTAAGCTTTTAGCAGGAGGACGACATAGGGCA
GCTCCTCATGCAGTGGTCGCCAAGGATGGCAGTGGTCAGTACAACACCGTCGCTGCTGCC
CTCGCTGCCTATCCTAAAAACCATAGAGGCAAATACATAGTCTATGTCAAAGCTGGAATC
TATGACGAGCATGTCATCATCTCTAAGAAGCAACCAAACGTCTTCATCTATGGCGATGGA
GCAGGGAAAACCATTATCACTGGACATAGAAACTTTGGTATCATGAATATACCCACCCAA
GACACTGCTACTTTTGCTGTTCTTGGCAATGGATTCGTTGCTAGGGGAATTACCTTCCGC
AACACTGCTGGTCCACAAGGTCACCAAGCTGTGGCTCTTCGAATTAACGGTGATATGGCT
GCTGTTTTTGACTGCAGCATTGAAGGTTATCAAGACACCTTGTACTATCAAAACCATCGC
CAATTTTATCGCAATTGTGTCATATCTGGTACGATAGATTTCATCTTTGGAAGGGGGTCA
GCAGTAATCCAAAATAGTTTGATCATAGCGAGGAGACCTTTGGACAGCCAGTTCAACACG
ATCACCGCTGATGGCAAAGAAATAGCGAACAAACCAGGTGGTTTGGTGTTCCAGAACTGC
AGAATCGTTCCAGAAAGGGAATTGTTTGCAGATAGGTTCAAGCTGGCAACATACTTGGGC
CGTCCCTGGAAGCCTTACGCAACGACTGTATTCATGGAGAGCGAATTGGGTGATTTCATC
CGCCCAGAAGGTTGGATGATATGGCAAGGACAATCATTCGAGCGGACATGTAATTACTAC
GAGTTTGCCAACCGCGGACCGGGTGCAAACATCAATAACAGGAACAAGAGCTTCAAGAAC
TTCCGTCTTATTAACCCAGTTGAAGCTGTTCAATATACAGTCGACCGCTGGATTAATGGA
TATCTTTGGTTGAGGCACACTGGTGCACCTTTTTACCTTGGCCTTGGAGGAAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400041608
PEP Infomation

pacid=37451431 transcript=PGSC0003DMT400061821 locus=PGSC0003DMG400024049 ID=PGSC0003DMT400061821.v4.03 annot-version=v4.03
Sequence

MVGKIVVSLVSLFLVVGVVLGVAIVVHKGSGQNPKVQMKASIVEFCKPAEFEIACFKSLD
AVSKNDSATMKDYLLASLQVTGDEIKKSLAVVEKGSPIDNKTDPYNHMAVEDCKELLQYA
VEELHDSYSMVGDTALHSLGDRVSELLNWLGAVYSYQSMCLDGIIDKPDYKEALENGMRN
ATQLTHNAINIVAKISTVLQAFNISSTITTSTSSHRRLLGYPTWFPVADRKLLAGGRHRA
APHAVVAKDGSGQYNTVAAALAAYPKNHRGKYIVYVKAGIYDEHVIISKKQPNVFIYGDG
AGKTIITGHRNFGIMNIPTQDTATFAVLGNGFVARGITFRNTAGPQGHQAVALRINGDMA
AVFDCSIEGYQDTLYYQNHRQFYRNCVISGTIDFIFGRGSAVIQNSLIIARRPLDSQFNT
ITADGKEIANKPGGLVFQNCRIVPERELFADRFKLATYLGRPWKPYATTVFMESELGDFI
RPEGWMIWQGQSFERTCNYYEFANRGPGANINNRNKSFKNFRLINPVEAVQYTVDRWING
YLWLRHTGAPFYLGLGGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400061821
Transcript Infomation

pacid=37451431 locus=PGSC0003DMG400024049 ID=PGSC0003DMT400061821.v4.03 annot-version=v4.03
Sequence

ATGGTGGGGAAAATAGTGGTTTCTTTGGTATCGTTGTTTCTTGTGGTGGGTGTCGTATTG
GGAGTGGCGATCGTGGTGCACAAAGGGTCGGGACAAAATCCGAAAGTCCAAATGAAGGCA
TCGATTGTGGAGTTCTGTAAACCTGCGGAATTCGAAATAGCTTGTTTTAAGAGCCTTGAT
GCAGTGTCTAAGAACGATAGTGCTACGATGAAAGACTACCTGTTAGCTTCGTTGCAAGTG
ACAGGGGATGAAATAAAGAAATCTTTAGCGGTGGTGGAAAAGGGTAGTCCTATCGATAAT
AAAACAGATCCGTACAATCACATGGCAGTAGAGGATTGCAAAGAGTTGTTGCAATATGCG
GTGGAGGAACTCCACGACTCCTACTCTATGGTTGGGGATACCGCATTGCATTCCCTTGGG
GATCGTGTAAGCGAACTATTGAACTGGCTCGGTGCGGTCTACTCCTATCAAAGCATGTGT
CTCGATGGTATAATCGATAAGCCTGATTACAAAGAAGCCTTAGAAAATGGCATGCGGAAT
GCAACCCAACTCACACACAATGCAATCAACATTGTAGCAAAGATTTCAACCGTCCTCCAA
GCCTTCAACATCTCAAGCACCATAACTACATCAACATCTAGTCATCGTCGCCTCCTTGGT
TACCCTACCTGGTTCCCTGTTGCCGACCGTAAGCTTTTAGCAGGAGGACGACATAGGGCA
GCTCCTCATGCAGTGGTCGCCAAGGATGGCAGTGGTCAGTACAACACCGTCGCTGCTGCC
CTCGCTGCCTATCCTAAAAACCATAGAGGCAAATACATAGTCTATGTCAAAGCTGGAATC
TATGACGAGCATGTCATCATCTCTAAGAAGCAACCAAACGTCTTCATCTATGGCGATGGA
GCAGGGAAAACCATTATCACTGGACATAGAAACTTTGGTATCATGAATATACCCACCCAA
GACACTGCTACTTTTGCTGTTCTTGGCAATGGATTCGTTGCTAGGGGAATTACCTTCCGC
AACACTGCTGGTCCACAAGGTCACCAAGCTGTGGCTCTTCGAATTAACGGTGATATGGCT
GCTGTTTTTGACTGCAGCATTGAAGGTTATCAAGACACCTTGTACTATCAAAACCATCGC
CAATTTTATCGCAATTGTGTCATATCTGGTACGATAGATTTCATCTTTGGAAGGGGGTCA
GCAGTAATCCAAAATAGTTTGATCATAGCGAGGAGACCTTTGGACAGCCAGTTCAACACG
ATCACCGCTGATGGCAAAGAAATAGCGAACAAACCAGGTGGTTTGGTGTTCCAGAACTGC
AGAATCGTTCCAGAAAGGGAATTGTTTGCAGATAGGTTCAAGCTGGCAACATACTTGGGC
CGTCCCTGGAAGCCTTACGCAACGACTGTATTCATGGAGAGCGAATTGGGTGATTTCATC
CGCCCAGAAGGTTGGATGATATGGCAAGGACAATCATTCGAGCGGACATGTAATTACTAC
GAGTTTGCCAACCGCGGACCGGGTGCAAACATCAATAACAGGAACAAGAGCTTCAAGAAC
TTCCGTCTTATTAACCCAGTTGAAGCTGTTCAATATACAGTCGACCGCTGGATTAATGGA
TATCTTTGGTTGAGGCACACTGGTGCACCTTTTTACCTTGGCCTTGGAGGAAGATAA