Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061752
CDS Infomation

pacid=37450634 polypeptide=PGSC0003DMP400041556 locus=PGSC0003DMG400024033 ID=PGSC0003DMT400061752.v4.03 annot-version=v4.03
Sequence

ATGTCGTCGTCATTCCCTGAACAAGTGTTGAAGCACCTCTTCTCCTTGTTAACCTCACAC
AAGGACCGTAACAGTATATCCTTAGTCTCTAAGTCGTGGTACGAGCTCGAGAGGCGCTCT
AGGAGGAGTGTCTTCATCGGCAACTGCTACGCCGTTAGCCCTGAGATTATGATCACACGC
TTCCCTCAACTCACATCCATCTATCTCAAAGGAAAGCCCCATTTTGCTGACTTTAATCTC
GTTCCTGACGGATGGGGTGCCTATCTTCAACCTTGGATTGCTGCAATGTCTCCCTCTTAT
CCTTGGCTTGAGGAAATTAGACTCAAGCGAATGGTTGTCACTGATGACTCCTTGGACTTG
ATTTCCACCTCATTTCACCATTTCAAGGTCTTGGTCTTGTTGTCTTGTGAAGGCTTTACT
ACCGATGGACTTGCTGCCATTGCCGCTAACTGCAGAAATCTCACTGAACTAGACTTGGGA
GAAAGTGAAGTGGAGGACCTAAGTAGTGATTGGCTCAGTCATTTTCCTGATGGTTGTACG
TCACTGGTGTCACTTAACATTTCTTGTTTGGGTTCTGAGATCAGCTTATCACATCTGGAG
AGTCTCATTGCACGTTCTCCTAATTTGAAGACACTTCGGCTCAGTCAAGCTGTCCCCCTT
GAGAAACTTCCACACATATTGTCTTGTGCTTCCCAATTGGTTGAATTTGGTACAGGTGCA
TACTCTTCTGAGGTACAGTTACAGTCTGATGTTTTCTCAAACCTCCAAGAAGCTTTTTCA
GGCTGCAAGATACTTGAAGGCTTGTCTGGATTTTGGGATGTCATGCCAGCTTACCTTCCA
GCTGTATATCCAGTTTGCTCCAGACTCACCTCATTGAATTTAAGCTATGCTACTATTCAA
AACCCTCATCTTAACAAGCTCATAAGTCTGTGTCATAATTTGCAGAGATTGTGGGTACTA
GACTACATTGAAGATACCGGTCTCCAGGCGCTTGCCGGTACCTGTAAAGACCTGCAAGAA
CTTAGGGTGTTTCCTTCTAATCCCTTTGATCCAGAACCAAATGTTTCCCTGACAGAGCAG
GGACTTGTAGCTGTTTCAGATGGCTGTCCTAAGCTCCAAACAGTTTTATACTTCTGCCGC
CAAATGAGAAATGCCGCTTTGATTACTATTGCTAGAAACAGTCCTAACATGGTTTGTTTT
CGCTTGTGTATTTTGGAACCTCGAACTCCTGATTACTTGACTCTTGAACCGCTTGATGCT
GGTTTTGGGGCAATTGTAGAACAATGCAAAGAGTTGCGGCGACTTTCTCTTTCTGGCCTT
CTTACTGACCGTGTGTTTGAGTACATTGGGACCCATGCTAAAAAGTTAGAGATGCTTTCC
GTCGCCTTTGCTGGGGATAGTGATATGGGCCTCCACCATGTACTCTCTGGATGTGAGAGC
CTCAGAAAACTAGAGATCAGAGACTGCCCCTTTAGTGACGACGCTCTTTTGGCTAATGCT
GCAAAACTGGAGACAATGAGATCCCTTTGGATGTCTTCTTGTTCAGTAAGTTTTGGAGCC
TGTAAGCTGCTAAGTCAGAAGATGCCTAGGCTTAATATTGAAGTTATAGATGAGATGGGT
CCTCTGGACACGCAGCCAAGAAGCTGCCCTGTTGATAAACTTTACATATACCGAACAGTG
GCTGGACCAAGGTTTGACCTGCCTGGTTTTGTTCGGATAATGAAAGAAGATGCTGCACAT
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400041556
PEP Infomation

pacid=37450634 transcript=PGSC0003DMT400061752 locus=PGSC0003DMG400024033 ID=PGSC0003DMT400061752.v4.03 annot-version=v4.03
Sequence

MSSSFPEQVLKHLFSLLTSHKDRNSISLVSKSWYELERRSRRSVFIGNCYAVSPEIMITR
FPQLTSIYLKGKPHFADFNLVPDGWGAYLQPWIAAMSPSYPWLEEIRLKRMVVTDDSLDL
ISTSFHHFKVLVLLSCEGFTTDGLAAIAANCRNLTELDLGESEVEDLSSDWLSHFPDGCT
SLVSLNISCLGSEISLSHLESLIARSPNLKTLRLSQAVPLEKLPHILSCASQLVEFGTGA
YSSEVQLQSDVFSNLQEAFSGCKILEGLSGFWDVMPAYLPAVYPVCSRLTSLNLSYATIQ
NPHLNKLISLCHNLQRLWVLDYIEDTGLQALAGTCKDLQELRVFPSNPFDPEPNVSLTEQ
GLVAVSDGCPKLQTVLYFCRQMRNAALITIARNSPNMVCFRLCILEPRTPDYLTLEPLDA
GFGAIVEQCKELRRLSLSGLLTDRVFEYIGTHAKKLEMLSVAFAGDSDMGLHHVLSGCES
LRKLEIRDCPFSDDALLANAAKLETMRSLWMSSCSVSFGACKLLSQKMPRLNIEVIDEMG
PLDTQPRSCPVDKLYIYRTVAGPRFDLPGFVRIMKEDAAH*

Transcript Sequence

Transcript ID

PGSC0003DMT400061752
Transcript Infomation

pacid=37450634 locus=PGSC0003DMG400024033 ID=PGSC0003DMT400061752.v4.03 annot-version=v4.03
Sequence

ATGTCGTCGTCATTCCCTGAACAAGTGTTGAAGCACCTCTTCTCCTTGTTAACCTCACAC
AAGGACCGTAACAGTATATCCTTAGTCTCTAAGTCGTGGTACGAGCTCGAGAGGCGCTCT
AGGAGGAGTGTCTTCATCGGCAACTGCTACGCCGTTAGCCCTGAGATTATGATCACACGC
TTCCCTCAACTCACATCCATCTATCTCAAAGGAAAGCCCCATTTTGCTGACTTTAATCTC
GTTCCTGACGGATGGGGTGCCTATCTTCAACCTTGGATTGCTGCAATGTCTCCCTCTTAT
CCTTGGCTTGAGGAAATTAGACTCAAGCGAATGGTTGTCACTGATGACTCCTTGGACTTG
ATTTCCACCTCATTTCACCATTTCAAGGTCTTGGTCTTGTTGTCTTGTGAAGGCTTTACT
ACCGATGGACTTGCTGCCATTGCCGCTAACTGCAGAAATCTCACTGAACTAGACTTGGGA
GAAAGTGAAGTGGAGGACCTAAGTAGTGATTGGCTCAGTCATTTTCCTGATGGTTGTACG
TCACTGGTGTCACTTAACATTTCTTGTTTGGGTTCTGAGATCAGCTTATCACATCTGGAG
AGTCTCATTGCACGTTCTCCTAATTTGAAGACACTTCGGCTCAGTCAAGCTGTCCCCCTT
GAGAAACTTCCACACATATTGTCTTGTGCTTCCCAATTGGTTGAATTTGGTACAGGTGCA
TACTCTTCTGAGGTACAGTTACAGTCTGATGTTTTCTCAAACCTCCAAGAAGCTTTTTCA
GGCTGCAAGATACTTGAAGGCTTGTCTGGATTTTGGGATGTCATGCCAGCTTACCTTCCA
GCTGTATATCCAGTTTGCTCCAGACTCACCTCATTGAATTTAAGCTATGCTACTATTCAA
AACCCTCATCTTAACAAGCTCATAAGTCTGTGTCATAATTTGCAGAGATTGTGGGTACTA
GACTACATTGAAGATACCGGTCTCCAGGCGCTTGCCGGTACCTGTAAAGACCTGCAAGAA
CTTAGGGTGTTTCCTTCTAATCCCTTTGATCCAGAACCAAATGTTTCCCTGACAGAGCAG
GGACTTGTAGCTGTTTCAGATGGCTGTCCTAAGCTCCAAACAGTTTTATACTTCTGCCGC
CAAATGAGAAATGCCGCTTTGATTACTATTGCTAGAAACAGTCCTAACATGGTTTGTTTT
CGCTTGTGTATTTTGGAACCTCGAACTCCTGATTACTTGACTCTTGAACCGCTTGATGCT
GGTTTTGGGGCAATTGTAGAACAATGCAAAGAGTTGCGGCGACTTTCTCTTTCTGGCCTT
CTTACTGACCGTGTGTTTGAGTACATTGGGACCCATGCTAAAAAGTTAGAGATGCTTTCC
GTCGCCTTTGCTGGGGATAGTGATATGGGCCTCCACCATGTACTCTCTGGATGTGAGAGC
CTCAGAAAACTAGAGATCAGAGACTGCCCCTTTAGTGACGACGCTCTTTTGGCTAATGCT
GCAAAACTGGAGACAATGAGATCCCTTTGGATGTCTTCTTGTTCAGTAAGTTTTGGAGCC
TGTAAGCTGCTAAGTCAGAAGATGCCTAGGCTTAATATTGAAGTTATAGATGAGATGGGT
CCTCTGGACACGCAGCCAAGAAGCTGCCCTGTTGATAAACTTTACATATACCGAACAGTG
GCTGGACCAAGGTTTGACCTGCCTGGTTTTGTTCGGATAATGAAAGAAGATGCTGCACAT
TAG