Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061715
CDS Infomation

pacid=37439907 polypeptide=PGSC0003DMP400041534 locus=PGSC0003DMG400024018 ID=PGSC0003DMT400061715.v4.03 annot-version=v4.03
Sequence

ATGGAAGAACCAACTGTTTTAGCTAAAGTTGCAACACCCCCAACTGAAGAATTGCTGAAG
AAGATCCAAGAATTGGAGGCAGGCCATGCTCAGTTGAAGCAGGAGATGTCTAAGCTTATG
GTTTCAAATGATAGTACATCACAGAGGCAAAGGTCTCATTCTATATCCCCACAACGCCCA
CCTCGCCTTAGGGGTTCTAATGACCCATTGGGGAAAAAGGGCTCTACTTCCTTTCGACAT
TCATCACCCTTGCAAAGAGAGAGCAGTAGTAAAACTGAGCGTTGCAGCAGCAGCAGCAGC
AGCAGCGGGGGCGTGAAGTTTACTGATAAACAGTATTTGAGCATATTGCAATCAATGGGC
CAAGCTGTGCATATATTTGATCTCAATTATCGATTAATTTACTGGAATCGAAGTGCTGAG
CAATTATATGGTTATTCAGCTGCCGAAGCTATTGGGCAGGATCTTCTTGAGCTGATAACA
GATCCTAAGGATCATGCTGTGGCTAAAATCATTATACACAGAGTGAAAATGGGTGAGAAT
TGGACTGGACAATTTCCTGTAAAGAATAAGCAGGGGGACAGGTTTTTAGTGGTAGCAACA
GATACCCCACTTTATGATGATGATGGTACATTTGTTGGTATTATTTGTGTGTCAACTGAT
GCGAGGCCTTTTCATGAATCATCTGCTGATGTGAAGCATACAGAAGCTGATAAAAGTTCT
GGTAGGCCTAGAAACATTGCTAATGCAACCCTTGGACTTGATCCACAGCAACCTCTGCAA
GCTGCCATTGCCTCCAAAATTTCGAATTTGGCTACAAAGATGAGCAACAAGGTTAAGTCA
AAAATGAAAACTGGAGAGGGAAGCATCCTTCGGGAAGGTGGAAGTGGAGATAGTCACCAT
TCTGATCATGCCTTTTCTGATGCTGCTCTATTGGATCAAAGGGAAGATGCAAATTCAAGT
GGAGCAAGTACACCCAGGGGAGATGTTCACTTTTCTCCATTTGGGGTATTTACTAATGTT
GCAAAAGAGGAGCACACTCCCGAAAAATCCTCAAGAGATTCTGGAGATGAGAGTGAGGGA
AAACCTGGGATTTCTAAGATTATAACCTCAAAGGCAGAGGCGTGGATGGTTAAGAAGAAT
TTATCATGGCCATGGAAAGGCAATGAGCGAGAAGTATCAGAGGCAAAGGCTACACGATTT
GTTTGGCCCTGGCTAAACAATGACCAAGATAATGAGTGGAATCATTTCAAGAGTTCTAAT
GCAGTATCAACACCAGATGATCAGATTATGGAAAGTAACCGTACAGCTACCAATGAGGCT
TGGGGATCCTGGTCATCATCATTTAATGTTAATAGCACAAGCAGTGCTAGTAGTACCGAT
AGCACTACTAGTACTGCTGTTAATAAAGTGGATGCTGATACTGACTGCTTGGATTATGAA
ATTTTGTGGGAGGATATGACAATCGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTT
TATCATGGGCTGTGGTTTGGATCAGATGTTGCGGTTAAAGTATTTTCCAAGCAAGAATAT
TCGGATGATGTCATATATTCCTTCAGACAGGAGGTGTCACTGATGAAACGTCTCCGACAT
CCAAATATTCTTCTTTTCATGGGTGCGGTAACTTCACCTCAACGCCTCTGTATTGTGACA
GAGTTCTTGCCACGAGGAAGTTTGTTTAGGTTACTACAAAGGAATGCATCCAAACTAGAA
TGGAGACGACGTATTCACATGGCTTTAGATATTGCTCGTGGCATGAACTATCTTCATCAT
TTCAACCCACCTATAGTTCATCGGGATCTGAAGTCTTCAAATCTTCTTGTGGACAAGAAC
TGGACCGTTAAGGTTGGGGACTTTGGTCTGTCACGTCTTAAGCACGAGACATATCTAACA
ACAAAGAATGGGAAAGGAACGCCACAATGGATGGCTCCAGAAGTTCTTCGCAATGAACCT
TCAGATGAGAAGGCTGATATATACAGTTTTGGTGTTATACTATGGGAACTTGCCACGGAA
AAGATCCCTTGGGATAACCTCAACTCAATGCAGGTGATTGGAGCTGTAGGATTCATGAAT
CAGCGGCTAGATATCCCCAAGAATGTTGATCCACAGTGGGTTTCTATTATTGAGAGCTGT
TGGCATAGCGAGCCACAGTTATGCCCAACGTTCCTAGAGTTGGTAGATAAACTCAAGGAT
ATGCTGAGGCAGTATGCCATTCAGGCTCAGGCAGCACGTAATGTTGCAGGAGATAGCAGC
CAGAAGGAACTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400041534
PEP Infomation

pacid=37439907 transcript=PGSC0003DMT400061715 locus=PGSC0003DMG400024018 ID=PGSC0003DMT400061715.v4.03 annot-version=v4.03
Sequence

MEEPTVLAKVATPPTEELLKKIQELEAGHAQLKQEMSKLMVSNDSTSQRQRSHSISPQRP
PRLRGSNDPLGKKGSTSFRHSSPLQRESSSKTERCSSSSSSSGGVKFTDKQYLSILQSMG
QAVHIFDLNYRLIYWNRSAEQLYGYSAAEAIGQDLLELITDPKDHAVAKIIIHRVKMGEN
WTGQFPVKNKQGDRFLVVATDTPLYDDDGTFVGIICVSTDARPFHESSADVKHTEADKSS
GRPRNIANATLGLDPQQPLQAAIASKISNLATKMSNKVKSKMKTGEGSILREGGSGDSHH
SDHAFSDAALLDQREDANSSGASTPRGDVHFSPFGVFTNVAKEEHTPEKSSRDSGDESEG
KPGISKIITSKAEAWMVKKNLSWPWKGNEREVSEAKATRFVWPWLNNDQDNEWNHFKSSN
AVSTPDDQIMESNRTATNEAWGSWSSSFNVNSTSSASSTDSTTSTAVNKVDADTDCLDYE
ILWEDMTIGEQIGQGSCGTVYHGLWFGSDVAVKVFSKQEYSDDVIYSFRQEVSLMKRLRH
PNILLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNASKLEWRRRIHMALDIARGMNYLHH
FNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKNGKGTPQWMAPEVLRNEP
SDEKADIYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLDIPKNVDPQWVSIIESC
WHSEPQLCPTFLELVDKLKDMLRQYAIQAQAARNVAGDSSQKEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400061715
Transcript Infomation

pacid=37439907 locus=PGSC0003DMG400024018 ID=PGSC0003DMT400061715.v4.03 annot-version=v4.03
Sequence

ATGGAAGAACCAACTGTTTTAGCTAAAGTTGCAACACCCCCAACTGAAGAATTGCTGAAG
AAGATCCAAGAATTGGAGGCAGGCCATGCTCAGTTGAAGCAGGAGATGTCTAAGCTTATG
GTTTCAAATGATAGTACATCACAGAGGCAAAGGTCTCATTCTATATCCCCACAACGCCCA
CCTCGCCTTAGGGGTTCTAATGACCCATTGGGGAAAAAGGGCTCTACTTCCTTTCGACAT
TCATCACCCTTGCAAAGAGAGAGCAGTAGTAAAACTGAGCGTTGCAGCAGCAGCAGCAGC
AGCAGCGGGGGCGTGAAGTTTACTGATAAACAGTATTTGAGCATATTGCAATCAATGGGC
CAAGCTGTGCATATATTTGATCTCAATTATCGATTAATTTACTGGAATCGAAGTGCTGAG
CAATTATATGGTTATTCAGCTGCCGAAGCTATTGGGCAGGATCTTCTTGAGCTGATAACA
GATCCTAAGGATCATGCTGTGGCTAAAATCATTATACACAGAGTGAAAATGGGTGAGAAT
TGGACTGGACAATTTCCTGTAAAGAATAAGCAGGGGGACAGGTTTTTAGTGGTAGCAACA
GATACCCCACTTTATGATGATGATGGTACATTTGTTGGTATTATTTGTGTGTCAACTGAT
GCGAGGCCTTTTCATGAATCATCTGCTGATGTGAAGCATACAGAAGCTGATAAAAGTTCT
GGTAGGCCTAGAAACATTGCTAATGCAACCCTTGGACTTGATCCACAGCAACCTCTGCAA
GCTGCCATTGCCTCCAAAATTTCGAATTTGGCTACAAAGATGAGCAACAAGGTTAAGTCA
AAAATGAAAACTGGAGAGGGAAGCATCCTTCGGGAAGGTGGAAGTGGAGATAGTCACCAT
TCTGATCATGCCTTTTCTGATGCTGCTCTATTGGATCAAAGGGAAGATGCAAATTCAAGT
GGAGCAAGTACACCCAGGGGAGATGTTCACTTTTCTCCATTTGGGGTATTTACTAATGTT
GCAAAAGAGGAGCACACTCCCGAAAAATCCTCAAGAGATTCTGGAGATGAGAGTGAGGGA
AAACCTGGGATTTCTAAGATTATAACCTCAAAGGCAGAGGCGTGGATGGTTAAGAAGAAT
TTATCATGGCCATGGAAAGGCAATGAGCGAGAAGTATCAGAGGCAAAGGCTACACGATTT
GTTTGGCCCTGGCTAAACAATGACCAAGATAATGAGTGGAATCATTTCAAGAGTTCTAAT
GCAGTATCAACACCAGATGATCAGATTATGGAAAGTAACCGTACAGCTACCAATGAGGCT
TGGGGATCCTGGTCATCATCATTTAATGTTAATAGCACAAGCAGTGCTAGTAGTACCGAT
AGCACTACTAGTACTGCTGTTAATAAAGTGGATGCTGATACTGACTGCTTGGATTATGAA
ATTTTGTGGGAGGATATGACAATCGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTT
TATCATGGGCTGTGGTTTGGATCAGATGTTGCGGTTAAAGTATTTTCCAAGCAAGAATAT
TCGGATGATGTCATATATTCCTTCAGACAGGAGGTGTCACTGATGAAACGTCTCCGACAT
CCAAATATTCTTCTTTTCATGGGTGCGGTAACTTCACCTCAACGCCTCTGTATTGTGACA
GAGTTCTTGCCACGAGGAAGTTTGTTTAGGTTACTACAAAGGAATGCATCCAAACTAGAA
TGGAGACGACGTATTCACATGGCTTTAGATATTGCTCGTGGCATGAACTATCTTCATCAT
TTCAACCCACCTATAGTTCATCGGGATCTGAAGTCTTCAAATCTTCTTGTGGACAAGAAC
TGGACCGTTAAGGTTGGGGACTTTGGTCTGTCACGTCTTAAGCACGAGACATATCTAACA
ACAAAGAATGGGAAAGGAACGCCACAATGGATGGCTCCAGAAGTTCTTCGCAATGAACCT
TCAGATGAGAAGGCTGATATATACAGTTTTGGTGTTATACTATGGGAACTTGCCACGGAA
AAGATCCCTTGGGATAACCTCAACTCAATGCAGGTGATTGGAGCTGTAGGATTCATGAAT
CAGCGGCTAGATATCCCCAAGAATGTTGATCCACAGTGGGTTTCTATTATTGAGAGCTGT
TGGCATAGCGAGCCACAGTTATGCCCAACGTTCCTAGAGTTGGTAGATAAACTCAAGGAT
ATGCTGAGGCAGTATGCCATTCAGGCTCAGGCAGCACGTAATGTTGCAGGAGATAGCAGC
CAGAAGGAACTATAG