Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061686
CDS Infomation

pacid=37437225 polypeptide=PGSC0003DMP400041513 locus=PGSC0003DMG400024008 ID=PGSC0003DMT400061686.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTGGTGCTCCTCCTGCTGATCAAGCTGCAGATTTGCTGCAGAATTTGTCATTG
GATTCTCGGAGTAAGACTCTTGAAATTGCAGACGCAAAAAAGAAACCTTCTGGGAACCCT
ACACATGGGGCAAACGGTCAGGTTCAGTCGACAGATCGGTCTGTGACACCTGTGTTGCCG
GAATTCATGGATCCAAATTTGTGCTATGTTCCTAACAGTTATACCTCAACAGCATACTAT
TATGGATATGATGCTTCTGCTAATGAGTGGGAGGACTATGCACGATATGCGAATCCGGAT
GGAGTTGAGATGCCTGGAGTTTATGGAGACAACAGCTCACTTATCTATCATCATGCCTAT
GGATATGCACCCTATAGTCCATATTCACCTGCTACTTCGCCTGTCCCTACTGTGGGGCAT
GATGGCCAACTTTATGGATCGCAACAATATCACTATCCGTATTTCCAGCCACTCCCCCTG
ACCAGTACTTCAAACACTACTTCAGCTGCCCTGCCAAAAGGTGAGATTGCCACCTCTGCA
GCAGCTGCTGACCAAGCATCATTATCTGTGGATTCTGCTAAAGGTAACTCTAATGTCGTT
GCAAATGGTGGTGTAAAGGGAAATACTGGGCATATGCCTGTGAGGCCTGCATTCCAGAAT
TCATCCTTAAATGCTAATGGTTCTTATGGACCTGGCACATTGCCTGGAGGAGCTGCTTCA
GGTTATCAGGACCCTAGACTGGGTTTTGATGGTGTGCATTCTCCTATTCCATGGATTGAT
GGGTCAATGTTCACTGATGGGCAAGCCAGGCCAGTGGCGAACAATTCTTTTACGCCATCA
TTTTCTAACGGCTATGCTGCTCCATCAACAAAGAATCAGAATGTTCATCCACATGTAATG
GGCATGCACCACCCAAGGCCTTCATCTGGCGTGAACACAACTAATGGGTATATGAATAGG
ATGTATCCCAACAAATATTATGGGCAGTTTGGGAACACATTCAATTCTGGCATGGGGTTT
GGGCCTAACCGGTATGATACTCGCGCTACAGGTCGTGGGTGGATGACAGTTGATAACAGG
TCTAAACCCAGGGGTAGAGGAAATAGTTTCTATGGCTATGGCAATGAAAACATGGATGGT
TTAAATGAGCTCAACAGGGGACCGAGAGGTAAAGGATCCAAGAATCAGAAGAGTTTTACA
CCAGTTGCTCTGGCAGTCAAGGGGCAGAACATCCCCCTTGCTGTAACCAAAGATGCTGAG
GAAGTTAAACCAAGCCTGATTCCTGACAGAGAACAATACAACCATCCAGATTTTCCAGTG
ACATATGCTGATGCCAAGTTCTTTATCATCAAGTCTTACAGTGAAGACGATGTGCACAAA
AGCATCAAATATAATGTGTGGGCTAGCACACCAAATGGCAACAAGAAGCTTGATGCTGCT
TACCAAGAGGCTCAACAAAATTCTGGAGGCTGCCCAGTTTTTCTTTTCTTCTCGGTAAAT
ACAAGTGGACAGTTTGTTGGTGTTGCAGAGATGGTAGGGCCAGTTGATTTCAACAAGAAT
GTGGAGTATTGGCAGCAAGACAAGTGGGTCGGCTGTTTTCCTGTCAAGTGGCACATTGTG
AAGGATGTACCAAATAGCTTGTTGAAACACATCACACTGGAAAACAACGAGAACAAGCCT
GTTACGAACAGCAGAGATACTCAGGAGGTTAAAGTGGAGCAGGGTCTGCAAGTGCTCAAG
ATATTTAAGGATCATATTAGCAAACAGTGCATCCTTGATGATTTTGAGTTCTATGAGGAT
CGTCAGAAGAGAATTCAGGATAAGAAGGCCAAGCAACAGCTATTCCAGAAGCAGTCTCAG
GTATGGGAAGGTAAAGCTACTGAAGAGAAGAACAGAGATAATTCAAAGGTTGACCTCAAG
TCACAGAAACCTTCAGAAGTTTCTGCTTGCTTGAACAAAGAAAATTTACCGGCTGCTGCC
CAGACTACTACTGTGGAAGTCAAGCTTACCGAAATTGTACCAGTTACAAAATCAGGAGAT
GATGTGAAGGATGCTAAACCAGTCACTATATCAGAAAAGAAACCTGTAGCAAATGGGGCT
TCTAATGGATGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400041513
PEP Infomation

pacid=37437225 transcript=PGSC0003DMT400061686 locus=PGSC0003DMG400024008 ID=PGSC0003DMT400061686.v4.03 annot-version=v4.03
Sequence

MAAGAPPADQAADLLQNLSLDSRSKTLEIADAKKKPSGNPTHGANGQVQSTDRSVTPVLP
EFMDPNLCYVPNSYTSTAYYYGYDASANEWEDYARYANPDGVEMPGVYGDNSSLIYHHAY
GYAPYSPYSPATSPVPTVGHDGQLYGSQQYHYPYFQPLPLTSTSNTTSAALPKGEIATSA
AAADQASLSVDSAKGNSNVVANGGVKGNTGHMPVRPAFQNSSLNANGSYGPGTLPGGAAS
GYQDPRLGFDGVHSPIPWIDGSMFTDGQARPVANNSFTPSFSNGYAAPSTKNQNVHPHVM
GMHHPRPSSGVNTTNGYMNRMYPNKYYGQFGNTFNSGMGFGPNRYDTRATGRGWMTVDNR
SKPRGRGNSFYGYGNENMDGLNELNRGPRGKGSKNQKSFTPVALAVKGQNIPLAVTKDAE
EVKPSLIPDREQYNHPDFPVTYADAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAA
YQEAQQNSGGCPVFLFFSVNTSGQFVGVAEMVGPVDFNKNVEYWQQDKWVGCFPVKWHIV
KDVPNSLLKHITLENNENKPVTNSRDTQEVKVEQGLQVLKIFKDHISKQCILDDFEFYED
RQKRIQDKKAKQQLFQKQSQVWEGKATEEKNRDNSKVDLKSQKPSEVSACLNKENLPAAA
QTTTVEVKLTEIVPVTKSGDDVKDAKPVTISEKKPVANGASNGC*

Transcript Sequence

Transcript ID

PGSC0003DMT400061686
Transcript Infomation

pacid=37437225 locus=PGSC0003DMG400024008 ID=PGSC0003DMT400061686.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTGGTGCTCCTCCTGCTGATCAAGCTGCAGATTTGCTGCAGAATTTGTCATTG
GATTCTCGGAGTAAGACTCTTGAAATTGCAGACGCAAAAAAGAAACCTTCTGGGAACCCT
ACACATGGGGCAAACGGTCAGGTTCAGTCGACAGATCGGTCTGTGACACCTGTGTTGCCG
GAATTCATGGATCCAAATTTGTGCTATGTTCCTAACAGTTATACCTCAACAGCATACTAT
TATGGATATGATGCTTCTGCTAATGAGTGGGAGGACTATGCACGATATGCGAATCCGGAT
GGAGTTGAGATGCCTGGAGTTTATGGAGACAACAGCTCACTTATCTATCATCATGCCTAT
GGATATGCACCCTATAGTCCATATTCACCTGCTACTTCGCCTGTCCCTACTGTGGGGCAT
GATGGCCAACTTTATGGATCGCAACAATATCACTATCCGTATTTCCAGCCACTCCCCCTG
ACCAGTACTTCAAACACTACTTCAGCTGCCCTGCCAAAAGGTGAGATTGCCACCTCTGCA
GCAGCTGCTGACCAAGCATCATTATCTGTGGATTCTGCTAAAGGTAACTCTAATGTCGTT
GCAAATGGTGGTGTAAAGGGAAATACTGGGCATATGCCTGTGAGGCCTGCATTCCAGAAT
TCATCCTTAAATGCTAATGGTTCTTATGGACCTGGCACATTGCCTGGAGGAGCTGCTTCA
GGTTATCAGGACCCTAGACTGGGTTTTGATGGTGTGCATTCTCCTATTCCATGGATTGAT
GGGTCAATGTTCACTGATGGGCAAGCCAGGCCAGTGGCGAACAATTCTTTTACGCCATCA
TTTTCTAACGGCTATGCTGCTCCATCAACAAAGAATCAGAATGTTCATCCACATGTAATG
GGCATGCACCACCCAAGGCCTTCATCTGGCGTGAACACAACTAATGGGTATATGAATAGG
ATGTATCCCAACAAATATTATGGGCAGTTTGGGAACACATTCAATTCTGGCATGGGGTTT
GGGCCTAACCGGTATGATACTCGCGCTACAGGTCGTGGGTGGATGACAGTTGATAACAGG
TCTAAACCCAGGGGTAGAGGAAATAGTTTCTATGGCTATGGCAATGAAAACATGGATGGT
TTAAATGAGCTCAACAGGGGACCGAGAGGTAAAGGATCCAAGAATCAGAAGAGTTTTACA
CCAGTTGCTCTGGCAGTCAAGGGGCAGAACATCCCCCTTGCTGTAACCAAAGATGCTGAG
GAAGTTAAACCAAGCCTGATTCCTGACAGAGAACAATACAACCATCCAGATTTTCCAGTG
ACATATGCTGATGCCAAGTTCTTTATCATCAAGTCTTACAGTGAAGACGATGTGCACAAA
AGCATCAAATATAATGTGTGGGCTAGCACACCAAATGGCAACAAGAAGCTTGATGCTGCT
TACCAAGAGGCTCAACAAAATTCTGGAGGCTGCCCAGTTTTTCTTTTCTTCTCGGTAAAT
ACAAGTGGACAGTTTGTTGGTGTTGCAGAGATGGTAGGGCCAGTTGATTTCAACAAGAAT
GTGGAGTATTGGCAGCAAGACAAGTGGGTCGGCTGTTTTCCTGTCAAGTGGCACATTGTG
AAGGATGTACCAAATAGCTTGTTGAAACACATCACACTGGAAAACAACGAGAACAAGCCT
GTTACGAACAGCAGAGATACTCAGGAGGTTAAAGTGGAGCAGGGTCTGCAAGTGCTCAAG
ATATTTAAGGATCATATTAGCAAACAGTGCATCCTTGATGATTTTGAGTTCTATGAGGAT
CGTCAGAAGAGAATTCAGGATAAGAAGGCCAAGCAACAGCTATTCCAGAAGCAGTCTCAG
GTATGGGAAGGTAAAGCTACTGAAGAGAAGAACAGAGATAATTCAAAGGTTGACCTCAAG
TCACAGAAACCTTCAGAAGTTTCTGCTTGCTTGAACAAAGAAAATTTACCGGCTGCTGCC
CAGACTACTACTGTGGAAGTCAAGCTTACCGAAATTGTACCAGTTACAAAATCAGGAGAT
GATGTGAAGGATGCTAAACCAGTCACTATATCAGAAAAGAAACCTGTAGCAAATGGGGCT
TCTAATGGATGCTAA