Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061679
CDS Infomation

pacid=37472839 polypeptide=PGSC0003DMP400041508 locus=PGSC0003DMG400024003 ID=PGSC0003DMT400061679.v4.03 annot-version=v4.03
Sequence

ATGAGTGACACAAAAATCATAAAACTAAGTTTGATTTTCTTTATGATCTACTTAGTGAAT
TCTAGCCCACCTGAAGATCCCATAAAATGTTCATACGACACCAATTTTAATTGCACCATT
ACAAACACTTATGGCGCCTTCCCAGATCGAACCATTTGCAAGGCAGCTCAAGCTGTTTTT
CCAACCACAGAAGAAGAAGTCATTTCTATAGTAGCGAATGCAACAAGGGAAAAGCGAAAA
ATGAAAATCACAACTCGATTTTCTAGTAGCATACCCAAATTGGTATGTCTAGACAATGGT
GATCAAGACGGGTTACTTATAAGTACAAAATTCCTAAATAAAATCATAAAAATCGATCAA
GAAAACATGATGATCACCGTTGAAAGTGGGGTGACATTGAGACAACTAATTAGTGAGGCA
GGTAAAGCAGGTTTGGTCCTGCCTTACACGCCTTACTGGTGGGGTTTAACGATTGGTGGC
TTAATTGGGACCGGAGCTCATGGAAGTTCTCTCTGGGGTTTGGGAAGTTCGGTACATGAT
TATATTGTACAACTTCGAATTGTTACACCAGCTGATGCGGCAAATAATTATGCTAAAGTC
CGTATATTGGAAAATGGTAGCCCCGACTTGAATGCTGTTAGAGTGTCACTAGGTGTTCTT
GGAGTTGTTTCACAGGTGACACTAAAACTAGAACGAGTGTTCAAACGTTCAATTACCTTT
TCTGAAAGGGATGACTCAAACTTAGGGGAAGATGCAGCTACTTTTGGGAGACAACATGAA
TTTGCTGATTTTACGTGGTATCCGAGTCAACACAAGGTTATTTATAGGATCGATGATCGA
GTTAGTATCGACACTCCTGGCAATGCCCTTAATGACTTCCTTGGATTTCGCCCTACAGAT
CAATACTTGCTCGCCTCTCTCAGAACCCTGGAGGAGATACTAGAATCAACAAATAATGCT
GATGGAAAATGCCTTGATGCAACAAAAACCACTGGCATATTGAAGTCTCTTTCTTATGGG
TGGACAAATAATGGTACTGGCTATCCAATGGTTGGGTTTCACGACCGAGTCCAAGCATCA
GGAACATGCCTAGACAGTCATGAAGGTGCAACATGCCCTTGGGACCATAGAGTTAAAGGT
CTATTTTTTCACCAAACAACATTTACCATTAGTTTATCAAAAGTCAAAGGTTTCATTGAA
GATGTCCAAAGGCTAGTTGCTTTAGAGCCTAAGGCACTATGTGTCCTTGACTTATACAAT
GGAATCCTCATGAGGTATGTTACAACTTCAAATGCTTACTTGGGTAAACAAGAAGATTCT
TTGGATTTTGACATCACATATTATAGAAGCAAGGACCCAATGTCCCCTAGACTCTTTGAA
GACTTCCTTGAAGAAATTGAACAACTAGCATTTTTCAAATATGGTGCATTGCCACATTGG
GGTAAAAATAGGAATGTAGCATTTATTGGGGCAATCAACAAGTACAAAAATGTTGATAAA
TTCTTGCAAGTGAAACAAAGTTATGACCATTTTGGTTTATTCTCAAGTGAGTGGACTGAT
CAAGTTTTAGGCTTAAAAGATGGGTTGAGCATAGTCAAAGAAGGTTGTGCTCTAGAAGGA
CTATGCATTTGCTCTAAAGATATTCATTGTGCTCCAAACAAGGGTTACTTTTGTCGACCC
GGAAGAATTTACAAAGATGCCAGGGTGTGTACTAATTCATCGTTAAGCACTATCGATATC
CAAACAAGGAAAACAATAAGCACATCAATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400041508
PEP Infomation

pacid=37472839 transcript=PGSC0003DMT400061679 locus=PGSC0003DMG400024003 ID=PGSC0003DMT400061679.v4.03 annot-version=v4.03
Sequence

MSDTKIIKLSLIFFMIYLVNSSPPEDPIKCSYDTNFNCTITNTYGAFPDRTICKAAQAVF
PTTEEEVISIVANATREKRKMKITTRFSSSIPKLVCLDNGDQDGLLISTKFLNKIIKIDQ
ENMMITVESGVTLRQLISEAGKAGLVLPYTPYWWGLTIGGLIGTGAHGSSLWGLGSSVHD
YIVQLRIVTPADAANNYAKVRILENGSPDLNAVRVSLGVLGVVSQVTLKLERVFKRSITF
SERDDSNLGEDAATFGRQHEFADFTWYPSQHKVIYRIDDRVSIDTPGNALNDFLGFRPTD
QYLLASLRTLEEILESTNNADGKCLDATKTTGILKSLSYGWTNNGTGYPMVGFHDRVQAS
GTCLDSHEGATCPWDHRVKGLFFHQTTFTISLSKVKGFIEDVQRLVALEPKALCVLDLYN
GILMRYVTTSNAYLGKQEDSLDFDITYYRSKDPMSPRLFEDFLEEIEQLAFFKYGALPHW
GKNRNVAFIGAINKYKNVDKFLQVKQSYDHFGLFSSEWTDQVLGLKDGLSIVKEGCALEG
LCICSKDIHCAPNKGYFCRPGRIYKDARVCTNSSLSTIDIQTRKTISTSM*

Transcript Sequence

Transcript ID

PGSC0003DMT400061679
Transcript Infomation

pacid=37472839 locus=PGSC0003DMG400024003 ID=PGSC0003DMT400061679.v4.03 annot-version=v4.03
Sequence

ATGAGTGACACAAAAATCATAAAACTAAGTTTGATTTTCTTTATGATCTACTTAGTGAAT
TCTAGCCCACCTGAAGATCCCATAAAATGTTCATACGACACCAATTTTAATTGCACCATT
ACAAACACTTATGGCGCCTTCCCAGATCGAACCATTTGCAAGGCAGCTCAAGCTGTTTTT
CCAACCACAGAAGAAGAAGTCATTTCTATAGTAGCGAATGCAACAAGGGAAAAGCGAAAA
ATGAAAATCACAACTCGATTTTCTAGTAGCATACCCAAATTGGTATGTCTAGACAATGGT
GATCAAGACGGGTTACTTATAAGTACAAAATTCCTAAATAAAATCATAAAAATCGATCAA
GAAAACATGATGATCACCGTTGAAAGTGGGGTGACATTGAGACAACTAATTAGTGAGGCA
GGTAAAGCAGGTTTGGTCCTGCCTTACACGCCTTACTGGTGGGGTTTAACGATTGGTGGC
TTAATTGGGACCGGAGCTCATGGAAGTTCTCTCTGGGGTTTGGGAAGTTCGGTACATGAT
TATATTGTACAACTTCGAATTGTTACACCAGCTGATGCGGCAAATAATTATGCTAAAGTC
CGTATATTGGAAAATGGTAGCCCCGACTTGAATGCTGTTAGAGTGTCACTAGGTGTTCTT
GGAGTTGTTTCACAGGTGACACTAAAACTAGAACGAGTGTTCAAACGTTCAATTACCTTT
TCTGAAAGGGATGACTCAAACTTAGGGGAAGATGCAGCTACTTTTGGGAGACAACATGAA
TTTGCTGATTTTACGTGGTATCCGAGTCAACACAAGGTTATTTATAGGATCGATGATCGA
GTTAGTATCGACACTCCTGGCAATGCCCTTAATGACTTCCTTGGATTTCGCCCTACAGAT
CAATACTTGCTCGCCTCTCTCAGAACCCTGGAGGAGATACTAGAATCAACAAATAATGCT
GATGGAAAATGCCTTGATGCAACAAAAACCACTGGCATATTGAAGTCTCTTTCTTATGGG
TGGACAAATAATGGTACTGGCTATCCAATGGTTGGGTTTCACGACCGAGTCCAAGCATCA
GGAACATGCCTAGACAGTCATGAAGGTGCAACATGCCCTTGGGACCATAGAGTTAAAGGT
CTATTTTTTCACCAAACAACATTTACCATTAGTTTATCAAAAGTCAAAGGTTTCATTGAA
GATGTCCAAAGGCTAGTTGCTTTAGAGCCTAAGGCACTATGTGTCCTTGACTTATACAAT
GGAATCCTCATGAGGTATGTTACAACTTCAAATGCTTACTTGGGTAAACAAGAAGATTCT
TTGGATTTTGACATCACATATTATAGAAGCAAGGACCCAATGTCCCCTAGACTCTTTGAA
GACTTCCTTGAAGAAATTGAACAACTAGCATTTTTCAAATATGGTGCATTGCCACATTGG
GGTAAAAATAGGAATGTAGCATTTATTGGGGCAATCAACAAGTACAAAAATGTTGATAAA
TTCTTGCAAGTGAAACAAAGTTATGACCATTTTGGTTTATTCTCAAGTGAGTGGACTGAT
CAAGTTTTAGGCTTAAAAGATGGGTTGAGCATAGTCAAAGAAGGTTGTGCTCTAGAAGGA
CTATGCATTTGCTCTAAAGATATTCATTGTGCTCCAAACAAGGGTTACTTTTGTCGACCC
GGAAGAATTTACAAAGATGCCAGGGTGTGTACTAATTCATCGTTAAGCACTATCGATATC
CAAACAAGGAAAACAATAAGCACATCAATGTAA