Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061642
CDS Infomation

pacid=37473782 polypeptide=PGSC0003DMP400041482 locus=PGSC0003DMG400023995 ID=PGSC0003DMT400061642.v4.03 annot-version=v4.03
Sequence

ATGGCATCAAGATCTAGTGCAAACTTTTTCGACTTGGCATCTGGGGACATACTGGATATA
CCTCAGACTCCTAGAGCACTTCCCCGTATGATGACTGTTCCCGGGATAATTTCTGATGGT
TGTCGCAGCAATGATGGGGATTCAGATAGTATGTCATCTGCTTGTCACGAGCGAAAGATT
ATTGTTGCAAACATGCTGCCTTTGCATGCTCAAAGGGATACAACAGCTGAAAAGTGGTGC
TTTAGTTTGGACGAGGATTCTCTTTTGTTACAACTGAAGGATGGGTTTTCACCTGAAACT
GAGGTTACCTATGTGGGTTCTCTCAAGGTAGATGTGGAGCCCAGTGAACAGGAGGAAGTT
ACACAGCGACTACTTGAGGAGTTCAAGTGTGTGCCTACCTTTGTACCTTGTGAAATCCAG
GAAATGTTTTATCATGGTTTCTGTAAGCAACAACTGTGGCCTCTTTTTCACTACATGCTC
CCAATGTGCCCAGACCATGCAGATCGTTTTGACCGTCAGCTGTGGCAAGCTTATGTCTCA
GTAAACAAGATCTTTGCTGATAAGGTTATGGAAGTGGTTAATCCCGAGGATGATTATATC
TGGGTTCAAGATTACCACCTCATGGTTCTTCCAACATTCTTAAGAAAGCGGTACCATCGA
GTGAAGCTTGGATTCTTTCTTCATAGCCCATTCCCATCATCAGAAATTTACCGAACTCTC
CCAGTTAGGGATGAAATTCTAAAAGGATTATTAAACTGCGACCTGATTGGCTTTCATACT
TTTGATTATGCACGTCATTTTCTGTCATGCTGTAGTAGAATGCTAGGTCTAGATTATGAA
TCTAAGCGAGGTCACATCGGACTTGATTATTTTGGTCGTACAGTTTACATTAAAATTCTT
CCAGTAGGCATACATATGGGTCGACTTGAGTCTGTGTTGAATCTTTCTTCTACATTTGCT
AAAGCTAAAGAAGTTCAAGAGCAGTTCAAAGGGAAGAAAGTCATTCTTGGTGTGGATGAT
ATGGATATTTTTAAAGGTATTAGTTTGAAATTACTAGCTTTTGAACACCTACTACAGCAG
CAAGAGGATTTGCAGGGTAAACTTGTTCTTGTCCAAATAGTAAATCCTGCTCGTAGCTCT
GGAAAGGATGTTCAGGAAGCAAAGAGGGAGACATATTCGACTGCTGAGAGGATCAACCAA
ATTTATGGAACTTCTAATTATGAGCCTGTAATTTTGATAGATCGTCCTGTTGCTCGATAT
GAGAAGACCGCATACTATGCTGTTGCTGAATGTTGCATAGTCAATGCAGTGAGGGATGGG
ATGAACTTAGTGCCTTACAAGTATATTGTCTGTAGGCAAGGCTCTCCTGGTATGGACGAA
GCTATGGGTATCAAAGCTGATTCTCCTAGAACTAGTATGCTTGTTGTGTCTGAATTTATT
GGTTGCTCACCATCGTTGAGTGGGGCAATTAGGGTAAATCCATGGGATATTGAAGCTGTG
GCTGAGGCTTTAAATGTGGCCATTACAATGTCGAATTCTGAGAAAGAACTTCGTCATGAG
AAGCACTACCGGTATGTGAGCTCTCACGATGTAGCTTATTGGGCTCGTAGTTTCATGCAG
GATTTGGAGAGAGCATGCCAAGATCATTATAGTAAGCGTTGCTGGGGCATTGGCCTGGGC
CTAGGTTTTAGAGTTATTGCACTTTCACCAAGCTTTAGAAAGTTGTCCTTAGATCACATT
GTTTCCTCATACAGGAGGACTCAGAGAAGGGCTATATTTTTGGACTATGACGGTACTGTT
GTACCTCAGTCATCTATGGTTAAAGCTCCAAGTGCCGAAGTTATTTCTCTGTTGAATGCT
CTAAGTAATGAACCTAAAAATACTGTGTATATTGTTAGTGGCAGAGGAAGGACTTCATTA
TGCGAGTGGCTTGCACCATGCGAAAGGCTTGGAATAGCTGCTGAACATGGGTACTTCATA
AGGGATTGTAAAACTTCTGAATGGGATCATTTGGATTCTGATCTTGAATGGAAAGAAATT
GCGGAACCTGTGATGCAACTTTACACAGAAGCAACTGATGGATCATTTATAGAATCTAAA
GAGAGTGCATTGGTGTGGCACCATTATGATGCAGACCCTGACTTCGGCTCCTGTCAGGCA
AAGGAATTGTTGGATCATTTGGAAAGTGTACTTGCAAATGAGCCTGCAGTTGTTAAGAGG
GGTCAACATATTGTTGAAGTCAAGCCGCAAGGTGTTACCAAGGGATTAGTTGCAGCGAAA
GTTCTCTCTATGATGGTTGAAAGTGGGAAACCACCTGATTTTGTGATGTGCATTGGAGAT
GACAGGTCGGATGAAGACATGTTTGAGAGCATATTAAGCACTATCTCCAGTCCGTCGGTC
ACTGCTGCCCCTGACATCTTTGCCTGCACTGTCGGGCAGAAGCCAAGCAAAGCCAAGTAT
TACCTCGATGATACCACTGATGTTCTTAAACTTCTTGGAGGTCTTGCTAATGCTTCTAAT
CCAAAGCCAATAGATACTGCTCAATTCCAGCTTGCCTTTGGTTCTGTTATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400041482
PEP Infomation

pacid=37473782 transcript=PGSC0003DMT400061642 locus=PGSC0003DMG400023995 ID=PGSC0003DMT400061642.v4.03 annot-version=v4.03
Sequence

MASRSSANFFDLASGDILDIPQTPRALPRMMTVPGIISDGCRSNDGDSDSMSSACHERKI
IVANMLPLHAQRDTTAEKWCFSLDEDSLLLQLKDGFSPETEVTYVGSLKVDVEPSEQEEV
TQRLLEEFKCVPTFVPCEIQEMFYHGFCKQQLWPLFHYMLPMCPDHADRFDRQLWQAYVS
VNKIFADKVMEVVNPEDDYIWVQDYHLMVLPTFLRKRYHRVKLGFFLHSPFPSSEIYRTL
PVRDEILKGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKIL
PVGIHMGRLESVLNLSSTFAKAKEVQEQFKGKKVILGVDDMDIFKGISLKLLAFEHLLQQ
QEDLQGKLVLVQIVNPARSSGKDVQEAKRETYSTAERINQIYGTSNYEPVILIDRPVARY
EKTAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGSPGMDEAMGIKADSPRTSMLVVSEFI
GCSPSLSGAIRVNPWDIEAVAEALNVAITMSNSEKELRHEKHYRYVSSHDVAYWARSFMQ
DLERACQDHYSKRCWGIGLGLGFRVIALSPSFRKLSLDHIVSSYRRTQRRAIFLDYDGTV
VPQSSMVKAPSAEVISLLNALSNEPKNTVYIVSGRGRTSLCEWLAPCERLGIAAEHGYFI
RDCKTSEWDHLDSDLEWKEIAEPVMQLYTEATDGSFIESKESALVWHHYDADPDFGSCQA
KELLDHLESVLANEPAVVKRGQHIVEVKPQGVTKGLVAAKVLSMMVESGKPPDFVMCIGD
DRSDEDMFESILSTISSPSVTAAPDIFACTVGQKPSKAKYYLDDTTDVLKLLGGLANASN
PKPIDTAQFQLAFGSVI*

Transcript Sequence

Transcript ID

PGSC0003DMT400061642
Transcript Infomation

pacid=37473782 locus=PGSC0003DMG400023995 ID=PGSC0003DMT400061642.v4.03 annot-version=v4.03
Sequence

ATGGCATCAAGATCTAGTGCAAACTTTTTCGACTTGGCATCTGGGGACATACTGGATATA
CCTCAGACTCCTAGAGCACTTCCCCGTATGATGACTGTTCCCGGGATAATTTCTGATGGT
TGTCGCAGCAATGATGGGGATTCAGATAGTATGTCATCTGCTTGTCACGAGCGAAAGATT
ATTGTTGCAAACATGCTGCCTTTGCATGCTCAAAGGGATACAACAGCTGAAAAGTGGTGC
TTTAGTTTGGACGAGGATTCTCTTTTGTTACAACTGAAGGATGGGTTTTCACCTGAAACT
GAGGTTACCTATGTGGGTTCTCTCAAGGTAGATGTGGAGCCCAGTGAACAGGAGGAAGTT
ACACAGCGACTACTTGAGGAGTTCAAGTGTGTGCCTACCTTTGTACCTTGTGAAATCCAG
GAAATGTTTTATCATGGTTTCTGTAAGCAACAACTGTGGCCTCTTTTTCACTACATGCTC
CCAATGTGCCCAGACCATGCAGATCGTTTTGACCGTCAGCTGTGGCAAGCTTATGTCTCA
GTAAACAAGATCTTTGCTGATAAGGTTATGGAAGTGGTTAATCCCGAGGATGATTATATC
TGGGTTCAAGATTACCACCTCATGGTTCTTCCAACATTCTTAAGAAAGCGGTACCATCGA
GTGAAGCTTGGATTCTTTCTTCATAGCCCATTCCCATCATCAGAAATTTACCGAACTCTC
CCAGTTAGGGATGAAATTCTAAAAGGATTATTAAACTGCGACCTGATTGGCTTTCATACT
TTTGATTATGCACGTCATTTTCTGTCATGCTGTAGTAGAATGCTAGGTCTAGATTATGAA
TCTAAGCGAGGTCACATCGGACTTGATTATTTTGGTCGTACAGTTTACATTAAAATTCTT
CCAGTAGGCATACATATGGGTCGACTTGAGTCTGTGTTGAATCTTTCTTCTACATTTGCT
AAAGCTAAAGAAGTTCAAGAGCAGTTCAAAGGGAAGAAAGTCATTCTTGGTGTGGATGAT
ATGGATATTTTTAAAGGTATTAGTTTGAAATTACTAGCTTTTGAACACCTACTACAGCAG
CAAGAGGATTTGCAGGGTAAACTTGTTCTTGTCCAAATAGTAAATCCTGCTCGTAGCTCT
GGAAAGGATGTTCAGGAAGCAAAGAGGGAGACATATTCGACTGCTGAGAGGATCAACCAA
ATTTATGGAACTTCTAATTATGAGCCTGTAATTTTGATAGATCGTCCTGTTGCTCGATAT
GAGAAGACCGCATACTATGCTGTTGCTGAATGTTGCATAGTCAATGCAGTGAGGGATGGG
ATGAACTTAGTGCCTTACAAGTATATTGTCTGTAGGCAAGGCTCTCCTGGTATGGACGAA
GCTATGGGTATCAAAGCTGATTCTCCTAGAACTAGTATGCTTGTTGTGTCTGAATTTATT
GGTTGCTCACCATCGTTGAGTGGGGCAATTAGGGTAAATCCATGGGATATTGAAGCTGTG
GCTGAGGCTTTAAATGTGGCCATTACAATGTCGAATTCTGAGAAAGAACTTCGTCATGAG
AAGCACTACCGGTATGTGAGCTCTCACGATGTAGCTTATTGGGCTCGTAGTTTCATGCAG
GATTTGGAGAGAGCATGCCAAGATCATTATAGTAAGCGTTGCTGGGGCATTGGCCTGGGC
CTAGGTTTTAGAGTTATTGCACTTTCACCAAGCTTTAGAAAGTTGTCCTTAGATCACATT
GTTTCCTCATACAGGAGGACTCAGAGAAGGGCTATATTTTTGGACTATGACGGTACTGTT
GTACCTCAGTCATCTATGGTTAAAGCTCCAAGTGCCGAAGTTATTTCTCTGTTGAATGCT
CTAAGTAATGAACCTAAAAATACTGTGTATATTGTTAGTGGCAGAGGAAGGACTTCATTA
TGCGAGTGGCTTGCACCATGCGAAAGGCTTGGAATAGCTGCTGAACATGGGTACTTCATA
AGGGATTGTAAAACTTCTGAATGGGATCATTTGGATTCTGATCTTGAATGGAAAGAAATT
GCGGAACCTGTGATGCAACTTTACACAGAAGCAACTGATGGATCATTTATAGAATCTAAA
GAGAGTGCATTGGTGTGGCACCATTATGATGCAGACCCTGACTTCGGCTCCTGTCAGGCA
AAGGAATTGTTGGATCATTTGGAAAGTGTACTTGCAAATGAGCCTGCAGTTGTTAAGAGG
GGTCAACATATTGTTGAAGTCAAGCCGCAAGGTGTTACCAAGGGATTAGTTGCAGCGAAA
GTTCTCTCTATGATGGTTGAAAGTGGGAAACCACCTGATTTTGTGATGTGCATTGGAGAT
GACAGGTCGGATGAAGACATGTTTGAGAGCATATTAAGCACTATCTCCAGTCCGTCGGTC
ACTGCTGCCCCTGACATCTTTGCCTGCACTGTCGGGCAGAAGCCAAGCAAAGCCAAGTAT
TACCTCGATGATACCACTGATGTTCTTAAACTTCTTGGAGGTCTTGCTAATGCTTCTAAT
CCAAAGCCAATAGATACTGCTCAATTCCAGCTTGCCTTTGGTTCTGTTATTTGA