Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061599
CDS Infomation

pacid=37466124 polypeptide=PGSC0003DMP400041443 locus=PGSC0003DMG400023977 ID=PGSC0003DMT400061599.v4.03 annot-version=v4.03
Sequence

ATGGCGGCCTCTGATACAATTGAGAACATGTATGACGTCGCTTTGAGGCCTCGGCTACTT
CGGTCTCTGCTCAAAGAGTATGTTCCTGACCTGAAACATCAGTTTCGGAATCCATCAGTT
CTCTCATATGTTGTTTCTGCCATTAAGACTCATCAGCTACTGTCCGAATCAGTTCCACCG
GAATCTGATGAAAAGTTGATTGAAAACTGGACAGCAGCCGTCGATTCCTGGATCAATCGA
GTAGTCGGTCTTGCGTCTAGTGACACGCCAGATAAATGCTGGGCGGGTATATGTTTGCTC
GGGGTGACAAGTCAAGAATGCAGTAGGGAACGTTTCATAGCTTCTTACGCTGCATGGTTT
AACAAACTCTTAGTGCATCTTCAGTCCCCGGCAGATTCTCACTTTGTGAAGGTAGCTACT
TGTGCCTCCCTGTCAGATTTGTTCACAAGGTTGAGTGGATTGCCAAATGCAAAGAAAGAT
GGTGTAGCACTCAGTACAAAACTAATTCAACCATTATTGAAGCAGCTAAACGAGGATAGA
TTTGATGCTTCATGGGAAGAAGCTATTTTTCTGTTGTGCAGTATTTTAGATATTTTCCCA
TCTTCCATTCAATGGCATTATGATGGTGTGGAGGATGCTATTGTCTTGAGGCTCATGTCA
GGCAAGTGCAATCCTAGTATGTTGAAGAAGCTTGGTTATTGTTTGGCTTTGCTACCAAAA
TCAAGAGGGGACGAGGATAGCTGGGTATTGATGATGCAGAAGATCATGCTGTCAATCAAT
ATTCAGCTGAATGATGCCTTCCAGGGTCTAGAGAAAGAAACTATAAGAACTGAGGCCATG
AGATTGCTGCTTCCCCCTGGGAAAGACCCACCGCCTCCATTAGGGGGCCAATCTTTGTCT
AGAGGAACTGTAGACAATACAATGAGGCCTGAGCACTTGCAGATCTCCAGAATCTCTACC
CTGATACTTTGTTGTTGTGAATTGCTTACGAGTTCTTACCCATTTCAGGTTGCTATACAT
GTACTTCCATTAATAGCACTTGCCAAAAGAGTGCTGATGGTTGATGGTTCCTCATCACTA
GGCATTGCCTATATGACTACAATGAAACAAGAATTTTTTTGTTCAGAACTCCCAGTCTTG
CATTCACACATATTGGATCTTCTTACATCAATTGTTAAAGGCTTGGGCAGCCAGTTGCTC
CCTCATGTTGGCTCTATAATACGACTCCTAACCAACTACATTGAAACATCTACTTTGCCA
GAGCTAAGGATAAAGGTGTACGCAATTATGAAAGTCCTGCTGCTGTCACTGGGGGTTGGG
ATATCCACACACCTCACCGATGTGATTGTTAACAATTCATTGATGGATTTAGATGAGAGA
GGCACATCTTCTGTTGCACAACAGAATATACATCCAGAGACTACAACAAAGACTTCCCAC
AAGAAGAGGAAGCATGCAAGTACAAGTAGTTTGCTTGATGAGCAGCCTGATAAAGATGTT
TTTGAAGTGGAAGTGTCCCCAAACATGGCTTCATTATCTGTTAAGATAGCTGCACTAGAG
GCATTGGAATCCCTTCTTGCTGTGGGTGGTTCTAGGAGATCCGAAAGTTGGCGAGTAAAT
GTTGATCACCTTCTTTTGGATGTTACCAGAAATGCTTCTAAAGGAGGGTGGGCCAAGGAT
GGCAGAGGCAGTTTGGTTTCTGACTCAACAACCAGTATTTGGCGAGACTATCAAATTGCA
GCTTTACGAGCACTTCTGGCTTCTCTCCTCTCTCCTGGCCGCACTCGCCCACCCCAGCTA
TCCCAGGGGCTTGACCTTTTTCGCAGAGGGACTCGAGAAATAGGAACTAAAGTTGCTGAA
TGTTGTGCACATGCTATTTTGGCATTGGAAGTGCTTATACATCCCCGAGCTCTTCCATTG
TTAGATCTAGAGTCCACTGACAACAATTACGAAGTTGGAAATAAGTGGTTTTCTGGGAAT
GTACACATCAGTAACCGTGCAGCAAATAACACATTCCACATTGGCACATCCAGAAAGGCG
CCTGACGAGCCAGACTCTTATAATGATGACCTTTATGCAGATTGGATGCGAAACGGTGAA
GATTTGGATACTGTGGCAGCTGATCCTGGAAAAGATACAGATACAAGTAATCGACCCCCA
GAAACATTAAGAGATCCATCATCAGAAAAGCTTACATCTTTTGATACTACTGCAGTAAAA
GTTTCTGAAAACAGTAAATTGGAGCAAGTAGCACCTATTACTACTGTTAAGAAAAGCCCC
ATGGACAGGGATGAGATCATGGTTGAATCACAACTATCTCCAAAAACAAGTAAACATTCT
GAAGATCTCCTACCATCTAAGAGTAATGTGGTATCTCTAGGATCGGAAAATATCGCGGAC
GATGCATCTAGAAAGGAGGTGGCAGAAGCTAGCGATGCTGGATTTGCTTCGCCGCTGATG
ATGAATTTAGACAGAGGTAAAGAGTTGATGCATGAATCTGATAATGAGTCCATGGAGTCA
ATTCCTGATATTGTTGATGTTGAGCCCGATTCTGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400041443
PEP Infomation

pacid=37466124 transcript=PGSC0003DMT400061599 locus=PGSC0003DMG400023977 ID=PGSC0003DMT400061599.v4.03 annot-version=v4.03
Sequence

MAASDTIENMYDVALRPRLLRSLLKEYVPDLKHQFRNPSVLSYVVSAIKTHQLLSESVPP
ESDEKLIENWTAAVDSWINRVVGLASSDTPDKCWAGICLLGVTSQECSRERFIASYAAWF
NKLLVHLQSPADSHFVKVATCASLSDLFTRLSGLPNAKKDGVALSTKLIQPLLKQLNEDR
FDASWEEAIFLLCSILDIFPSSIQWHYDGVEDAIVLRLMSGKCNPSMLKKLGYCLALLPK
SRGDEDSWVLMMQKIMLSINIQLNDAFQGLEKETIRTEAMRLLLPPGKDPPPPLGGQSLS
RGTVDNTMRPEHLQISRISTLILCCCELLTSSYPFQVAIHVLPLIALAKRVLMVDGSSSL
GIAYMTTMKQEFFCSELPVLHSHILDLLTSIVKGLGSQLLPHVGSIIRLLTNYIETSTLP
ELRIKVYAIMKVLLLSLGVGISTHLTDVIVNNSLMDLDERGTSSVAQQNIHPETTTKTSH
KKRKHASTSSLLDEQPDKDVFEVEVSPNMASLSVKIAALEALESLLAVGGSRRSESWRVN
VDHLLLDVTRNASKGGWAKDGRGSLVSDSTTSIWRDYQIAALRALLASLLSPGRTRPPQL
SQGLDLFRRGTREIGTKVAECCAHAILALEVLIHPRALPLLDLESTDNNYEVGNKWFSGN
VHISNRAANNTFHIGTSRKAPDEPDSYNDDLYADWMRNGEDLDTVAADPGKDTDTSNRPP
ETLRDPSSEKLTSFDTTAVKVSENSKLEQVAPITTVKKSPMDRDEIMVESQLSPKTSKHS
EDLLPSKSNVVSLGSENIADDASRKEVAEASDAGFASPLMMNLDRGKELMHESDNESMES
IPDIVDVEPDSD*

Transcript Sequence

Transcript ID

PGSC0003DMT400061599
Transcript Infomation

pacid=37466124 locus=PGSC0003DMG400023977 ID=PGSC0003DMT400061599.v4.03 annot-version=v4.03
Sequence

ATGGCGGCCTCTGATACAATTGAGAACATGTATGACGTCGCTTTGAGGCCTCGGCTACTT
CGGTCTCTGCTCAAAGAGTATGTTCCTGACCTGAAACATCAGTTTCGGAATCCATCAGTT
CTCTCATATGTTGTTTCTGCCATTAAGACTCATCAGCTACTGTCCGAATCAGTTCCACCG
GAATCTGATGAAAAGTTGATTGAAAACTGGACAGCAGCCGTCGATTCCTGGATCAATCGA
GTAGTCGGTCTTGCGTCTAGTGACACGCCAGATAAATGCTGGGCGGGTATATGTTTGCTC
GGGGTGACAAGTCAAGAATGCAGTAGGGAACGTTTCATAGCTTCTTACGCTGCATGGTTT
AACAAACTCTTAGTGCATCTTCAGTCCCCGGCAGATTCTCACTTTGTGAAGGTAGCTACT
TGTGCCTCCCTGTCAGATTTGTTCACAAGGTTGAGTGGATTGCCAAATGCAAAGAAAGAT
GGTGTAGCACTCAGTACAAAACTAATTCAACCATTATTGAAGCAGCTAAACGAGGATAGA
TTTGATGCTTCATGGGAAGAAGCTATTTTTCTGTTGTGCAGTATTTTAGATATTTTCCCA
TCTTCCATTCAATGGCATTATGATGGTGTGGAGGATGCTATTGTCTTGAGGCTCATGTCA
GGCAAGTGCAATCCTAGTATGTTGAAGAAGCTTGGTTATTGTTTGGCTTTGCTACCAAAA
TCAAGAGGGGACGAGGATAGCTGGGTATTGATGATGCAGAAGATCATGCTGTCAATCAAT
ATTCAGCTGAATGATGCCTTCCAGGGTCTAGAGAAAGAAACTATAAGAACTGAGGCCATG
AGATTGCTGCTTCCCCCTGGGAAAGACCCACCGCCTCCATTAGGGGGCCAATCTTTGTCT
AGAGGAACTGTAGACAATACAATGAGGCCTGAGCACTTGCAGATCTCCAGAATCTCTACC
CTGATACTTTGTTGTTGTGAATTGCTTACGAGTTCTTACCCATTTCAGGTTGCTATACAT
GTACTTCCATTAATAGCACTTGCCAAAAGAGTGCTGATGGTTGATGGTTCCTCATCACTA
GGCATTGCCTATATGACTACAATGAAACAAGAATTTTTTTGTTCAGAACTCCCAGTCTTG
CATTCACACATATTGGATCTTCTTACATCAATTGTTAAAGGCTTGGGCAGCCAGTTGCTC
CCTCATGTTGGCTCTATAATACGACTCCTAACCAACTACATTGAAACATCTACTTTGCCA
GAGCTAAGGATAAAGGTGTACGCAATTATGAAAGTCCTGCTGCTGTCACTGGGGGTTGGG
ATATCCACACACCTCACCGATGTGATTGTTAACAATTCATTGATGGATTTAGATGAGAGA
GGCACATCTTCTGTTGCACAACAGAATATACATCCAGAGACTACAACAAAGACTTCCCAC
AAGAAGAGGAAGCATGCAAGTACAAGTAGTTTGCTTGATGAGCAGCCTGATAAAGATGTT
TTTGAAGTGGAAGTGTCCCCAAACATGGCTTCATTATCTGTTAAGATAGCTGCACTAGAG
GCATTGGAATCCCTTCTTGCTGTGGGTGGTTCTAGGAGATCCGAAAGTTGGCGAGTAAAT
GTTGATCACCTTCTTTTGGATGTTACCAGAAATGCTTCTAAAGGAGGGTGGGCCAAGGAT
GGCAGAGGCAGTTTGGTTTCTGACTCAACAACCAGTATTTGGCGAGACTATCAAATTGCA
GCTTTACGAGCACTTCTGGCTTCTCTCCTCTCTCCTGGCCGCACTCGCCCACCCCAGCTA
TCCCAGGGGCTTGACCTTTTTCGCAGAGGGACTCGAGAAATAGGAACTAAAGTTGCTGAA
TGTTGTGCACATGCTATTTTGGCATTGGAAGTGCTTATACATCCCCGAGCTCTTCCATTG
TTAGATCTAGAGTCCACTGACAACAATTACGAAGTTGGAAATAAGTGGTTTTCTGGGAAT
GTACACATCAGTAACCGTGCAGCAAATAACACATTCCACATTGGCACATCCAGAAAGGCG
CCTGACGAGCCAGACTCTTATAATGATGACCTTTATGCAGATTGGATGCGAAACGGTGAA
GATTTGGATACTGTGGCAGCTGATCCTGGAAAAGATACAGATACAAGTAATCGACCCCCA
GAAACATTAAGAGATCCATCATCAGAAAAGCTTACATCTTTTGATACTACTGCAGTAAAA
GTTTCTGAAAACAGTAAATTGGAGCAAGTAGCACCTATTACTACTGTTAAGAAAAGCCCC
ATGGACAGGGATGAGATCATGGTTGAATCACAACTATCTCCAAAAACAAGTAAACATTCT
GAAGATCTCCTACCATCTAAGAGTAATGTGGTATCTCTAGGATCGGAAAATATCGCGGAC
GATGCATCTAGAAAGGAGGTGGCAGAAGCTAGCGATGCTGGATTTGCTTCGCCGCTGATG
ATGAATTTAGACAGAGGTAAAGAGTTGATGCATGAATCTGATAATGAGTCCATGGAGTCA
ATTCCTGATATTGTTGATGTTGAGCCCGATTCTGATTAA