Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061562
CDS Infomation

pacid=37465738 polypeptide=PGSC0003DMP400041423 locus=PGSC0003DMG400023964 ID=PGSC0003DMT400061562.v4.03 annot-version=v4.03
Sequence

ATGAAGGGCAACGGCAAAACACACCCAATGGAGAAAGAGCAAAACGAGAAAAATGAGAGT
TGTAATACTTGTCTGTCGATGCTACCGGAGGGATGTATCGCTGAGATCTTCGCCTTTACG
AGCCCGCCGGTCGTTTGCCGCTTTTCCTTAGTTTCTACATCTCTCCGTTCTGCCGCCGAT
TCCGATTCCGTTTGGGCAAAATTCCTGCCGTCCGATTATCCATCCATCATCGCCAAATCA
CCGACTCCGATCCCCGATTTCCCATCACTCAAGGATGCCTATGTTTATCTCGCCGATCAT
CCACTCTTAATTGATGAAGGTCGCAAGACTTTCTCACTGGATAAATGGACTGGAAAGAAA
TGCTACTTCTTAGGTGCAAGAGATCTTAATATTGTATCGAGTGATACACCAGACGCTTGG
GAATGGACTTCTGTACCAGAGTCCAGGTTTCCAGAGGTGGCTCAGCTGAAATTTATTCGC
TGGCTTCAAATTTGGGGCACAATAAGAGCTGGGATTCTATCACTACTGACATCCTACACA
GCTTACTTTGTTTACAAGTTGGGAGATGATTCTTATGGGTTTGATACTAGACACATGGAG
GTTTCAGTTGGAATTTCTGGTGTTGAATCTGCAAATGTGCGGATTGCTTTTTTGCATCTG
AATCCTAAATTTATACCTGAGGATATGTACACGTCACCTTATACTCCGCCCTCCCCTTAT
ATAGAGTACTGTTGGATGGGGCCTTTATGGCCTGGAATTGATTATGATCCTCCCGAAGAT
GTTGATTGGGATCATCATCCTAGTAACTTGAAGCTTGATAAACCAGTTCCTAAACTTAGA
GATGATGGCTGGTTTGAGTTAGAATTGGGTAATTTTTTTACTGAAAATGAAGATGATTGC
ATCGAGTTGAGAATGGAAGATGTGAAAACTGGTTGTACAAAACAAGGCCTTATTGTTGAA
GGAATTGAGATAAGGCCAACAATTGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400041423
PEP Infomation

pacid=37465738 transcript=PGSC0003DMT400061562 locus=PGSC0003DMG400023964 ID=PGSC0003DMT400061562.v4.03 annot-version=v4.03
Sequence

MKGNGKTHPMEKEQNEKNESCNTCLSMLPEGCIAEIFAFTSPPVVCRFSLVSTSLRSAAD
SDSVWAKFLPSDYPSIIAKSPTPIPDFPSLKDAYVYLADHPLLIDEGRKTFSLDKWTGKK
CYFLGARDLNIVSSDTPDAWEWTSVPESRFPEVAQLKFIRWLQIWGTIRAGILSLLTSYT
AYFVYKLGDDSYGFDTRHMEVSVGISGVESANVRIAFLHLNPKFIPEDMYTSPYTPPSPY
IEYCWMGPLWPGIDYDPPEDVDWDHHPSNLKLDKPVPKLRDDGWFELELGNFFTENEDDC
IELRMEDVKTGCTKQGLIVEGIEIRPTIA*

Transcript Sequence

Transcript ID

PGSC0003DMT400061562
Transcript Infomation

pacid=37465738 locus=PGSC0003DMG400023964 ID=PGSC0003DMT400061562.v4.03 annot-version=v4.03
Sequence

ATGAAGGGCAACGGCAAAACACACCCAATGGAGAAAGAGCAAAACGAGAAAAATGAGAGT
TGTAATACTTGTCTGTCGATGCTACCGGAGGGATGTATCGCTGAGATCTTCGCCTTTACG
AGCCCGCCGGTCGTTTGCCGCTTTTCCTTAGTTTCTACATCTCTCCGTTCTGCCGCCGAT
TCCGATTCCGTTTGGGCAAAATTCCTGCCGTCCGATTATCCATCCATCATCGCCAAATCA
CCGACTCCGATCCCCGATTTCCCATCACTCAAGGATGCCTATGTTTATCTCGCCGATCAT
CCACTCTTAATTGATGAAGGTCGCAAGACTTTCTCACTGGATAAATGGACTGGAAAGAAA
TGCTACTTCTTAGGTGCAAGAGATCTTAATATTGTATCGAGTGATACACCAGACGCTTGG
GAATGGACTTCTGTACCAGAGTCCAGGTTTCCAGAGGTGGCTCAGCTGAAATTTATTCGC
TGGCTTCAAATTTGGGGCACAATAAGAGCTGGGATTCTATCACTACTGACATCCTACACA
GCTTACTTTGTTTACAAGTTGGGAGATGATTCTTATGGGTTTGATACTAGACACATGGAG
GTTTCAGTTGGAATTTCTGGTGTTGAATCTGCAAATGTGCGGATTGCTTTTTTGCATCTG
AATCCTAAATTTATACCTGAGGATATGTACACGTCACCTTATACTCCGCCCTCCCCTTAT
ATAGAGTACTGTTGGATGGGGCCTTTATGGCCTGGAATTGATTATGATCCTCCCGAAGAT
GTTGATTGGGATCATCATCCTAGTAACTTGAAGCTTGATAAACCAGTTCCTAAACTTAGA
GATGATGGCTGGTTTGAGTTAGAATTGGGTAATTTTTTTACTGAAAATGAAGATGATTGC
ATCGAGTTGAGAATGGAAGATGTGAAAACTGGTTGTACAAAACAAGGCCTTATTGTTGAA
GGAATTGAGATAAGGCCAACAATTGCTTAA