Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061540
CDS Infomation

pacid=37454302 polypeptide=PGSC0003DMP400041405 locus=PGSC0003DMG400023950 ID=PGSC0003DMT400061540.v4.03 annot-version=v4.03
Sequence

ATGAAGAGGCATATACATTACAATGCTCATCCAATTGATCCACACCCTTTTGAGGCATTC
TGGTACGGATCTTGGCAAGCTGTGGAGCGCCTAAGGATCAATATGGGGACCATCACTACT
CATGTTCTAGTTGATGGGGAGGTGATTGAGGAGAATATTCCGGTAACAAATCTTCGAATG
AGGTCTAGAAAAGCTACTTTATCTGATTGTGCCTGCTTCTTACGACCTGGACTTGAGGTT
TGTGTGCTTTCAATCCCTTACCAAGGAGAAGATTCAGGGGATGAGAAAGATGTCAAGCCT
GTGTGGATTGATGGAAAAATAAGATCTATAGAGAGGAAGCCTCATGAGCTCACTTGTACT
TGCGAATTTCATGTCAGCGTTTATGTCACTCAAGGCCCTCCTCCCATTTTGAAGAAAACC
CTAAGTAAAGAGATAAAGATGTTGCCCATTGATCAGATTGCAGTTCTCCAAAAACTTGAA
CCTAAACCTTGTGAAGACAAACATTACCGTTGGAGTTCTTCTGAGGACTGCAATTCGTTG
CAGACTTTTAAACTATTCATAGGAAAATTCTCCTCTGACCTCACATGGTTAATGACTGCA
TCTGTCCTGAAAGAAGCTACATTTGATGTAAGATCGATCCATAACCAGATTGTCTATGAG
ATTGTGGATGATGATCTAGTCAAGAAAGAATCAAATCCAAACCAACATTCTCACTCCGTG
AATTTCAAGTTAGAAGACGGAGTTCAAACAACCACTGTTTTTCAATTCAGTAGGGATATC
CCAGATGTAAATTCTACCAGTGACCTTAGTGAAGCTGGGCCTCTAGTTCTGTATGATCTA
ATGGGCCCACGAAGGTCAAAGCGTCGATTTGTACAGCCAGAGCGTTATTATGGATGTGAT
GATGATATGGCAGAATTTGATGTTGAGATGACAAGGTTAGTTGGGGGTAGGAGAAAAGTG
GAGTATGAAGAACTACCACTTGCACTTTCTATTCAGGCTGATCATGCTTATCGAACTGGT
GAAATCGATGAAATTGCCAGGTCTTACAAGAGAGAGTTGTTTGGAGGAAGTATCAGACCT
CATGAGAAGTCCTCTGAAAGTTCATCCGGATGGAGAAATGCACTCAAATCAGATGTAAAT
AAGCTTGCAGACAAGAAATCAGTTACAGCTGACAGTCAACATCAACTTGCTATTGTTCCC
CTGCATCCTTCTTCAGGAACTGATTTAACTGTCCATGAACAGGTTCCGCTTGATGTTGAT
GTTCCTGAACATTTGTCTGCAGAGATTGGTGAAATAGTTTCCAGATATATTTATTTCAAT
AGTTCTTCAACATCGCATGATAGGAAAGCTTCCAAAATGAACTTCACAAAACCAGAAGCT
AGACGCTGGGGTCAAGTCAAAATTTCAAAGTTAAAGTTCATGGGACTTGATCGAAGAGGT
GGGGCGTTAGGTTCACATAAGAAATACAAAAGAAATAGTTCAAAGAAGGATAGTATTTAT
GATATAAGATCATTCAAAAAGGGTTCTGTAGCGGCTAATGTGTACAAGGAATTGATTAGA
AGGTGCATGGCGAACATTGATGCCACACTTAATAAGGAACAGCCACCAATAATTGATCAG
TGGAAAGAGTTTCAGTCAACAAAATCTGACCACAGAGAGTCAGGTGATCATCTCGCAATG
AATAGGGACGAAGAGGTTTCAGAAATTGATATGTTATGGAAGGAGATGGAACTAGCCCTG
GCATCATGTTATCTTCTAGATGACAGTGAGGATTCCCATGTTCAATATGCAAGTAATGTC
AGGATAGGAGCTGAAATACGTGGAGAAGTTTGTCGACATGATTATCGACTGAATGAAGAA
ATTGGAATTATTTGCCGGCTATGTGGATTCGTTAGCACCGAAATAAAGGATGTTCCACCA
CCCTTTATGCCTTCGTCAAACTACAGTTCCAACAAGGAGCAAAGAACTGAAGAAGCTACA
GATCACAAGCAGGATGATGATGGCCTTGATACTCTGTCCATTCCTGTTTCTTCCAGAGCA
CCCTCATCATCAGGAGGAGGGGAAGGAAATGTCTGGGAGTTGATACCTGATCTAGGAAAA
AAATTACGGGTACACCAAAAGAGAGCCTTTGAATTTCTGTGGAAAAATATTGCTGGATCC
ATAGTACCTGCAGAAATGCAACCAGAGAGCAAAGAGAGAGGTGGCTGTGTTATTTCTCAT
ACTCCAGGAGCTGGGAAAACCTTACTAATTATTTCCTTCCTTGTAAGCTATCTGAAGTTA
TTTCCTGGATCACGACCATTGGTCCTTGCTCCCAAGACAACACTCTACACCTGGTACAAA
GAAGTACTAAAGTGGAAGATTCCTGTGCCAGTCTACCAAATTCATGGTGGTCAAACCTTT
AAGGGAGAGGTTCTAAGGGAAAAGGTGAAATTATGTCCTGGTCTTCCTCGCAACCAAGAT
GTCATGCATGTCTTGGACTGCCTTGAGAAAATGCAGATGTGGCTTTCGCAACCCAGTGTT
CTCCTTATGGGTTATACCTCTTTTTTAACACTGACACGGGAAGATTCACCTTATGCGCAT
AGGAAATATATGGCCCAGGTGTTGCGGCATTGTCCAGGGCTACTCATACTTGATGAAGGG
CACAACCCAAGAAGTACAAAATCCAGGTTAAGAAAGGGTCTAATGAAGGTCAATACACGG
CTTAGGATATTACTTTCTGGTACATTATTTCAGAATAATTTTGGAGAGTATTTCAATACA
CTTACCTTAGCAAGGCCAACCTTTGTTGATGAGGTCTTGAAGGAGCTGGATCCCAAGTAC
AAGAAGAAAAACAAAGGTGCATCGCGCTTTTCATTGGAAAATCGAGCAAGAAAGATGTTT
ATTGATAAAATTTCAACCGTCATTGATTCAGACATCCCCAAGAAAAGGAAAGAAGGCCTA
AACATATTGAAGAAACTAACAGGTGGATTCATAGATGTGCATGACGGTGGAACATCTGAT
AACCTTCCTGGTTTACAATGTTACACCTTGATGATGAAATCAACTACTCTTCAACAAGAA
ATTTTGGTGAAGCTTCAAAATCAAAGGCCCATCTACAAAGGATTTCCTCTGGAGTTAGAG
CTGTTGATTACCCTTGGTGCAATCCATCCTTGGTTGATCAGAACGACAGCATGTTCTAGC
CAGTACTTCAAGGAAGAGGAGCTGGAGGCTCTCCAGAAATTCAAGTTTGATCTGAAGCTG
GGTTCAAAAGTCAAATTTGTAATGAGCCTAATTCCTCGTTGTCTCCTCAGGAGAGAAAAG
GTTTTGATATTTTGCCACAATATTGCTCCAATTAATCTTTTTCTGGAGATATTTGAGAGG
TTCTATGGGTGGAGAAAGGGCATCGAAGTACTGGTGCTTCAAGGTGACATTGAGCTTTTT
CAAAGAGGAAGGATAATGGATCTATTTGAGGAGCCAGGTGGACCATCAAAGGTTATGTTG
GCATCCATTACAACTTGTGCAGAAGGCATTAGCTTGACCGCAGCATCACGTGTAATATTA
CTGGATTCAGAGTGGAATCCTTCTAAGAGCAAGCAAGCCATTGCACGAGCTTTTCGTCCT
GGTCAGGACAAAGTTGTGTATGTCTACCAGCTTCTGGCAACGGGCACACTGGAAGAGGAG
AAATACAAAAGAACAACATGGAAAGAATGGGTATCAAGCATGATATTCAGTGAAGACCTT
GTGGAGGACCCTTCTCACTGGCAAGCTCCAAAAATTGAAGATGAATTATTGAGAGAAATT
GTTGAGGAGGATCGAGCTACATTATTCCATGCCATTATGAAAAATGAGAAGGCTTCCAAC
ATGGGAAGTCTGCAGGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400041405
PEP Infomation

pacid=37454302 transcript=PGSC0003DMT400061540 locus=PGSC0003DMG400023950 ID=PGSC0003DMT400061540.v4.03 annot-version=v4.03
Sequence

MKRHIHYNAHPIDPHPFEAFWYGSWQAVERLRINMGTITTHVLVDGEVIEENIPVTNLRM
RSRKATLSDCACFLRPGLEVCVLSIPYQGEDSGDEKDVKPVWIDGKIRSIERKPHELTCT
CEFHVSVYVTQGPPPILKKTLSKEIKMLPIDQIAVLQKLEPKPCEDKHYRWSSSEDCNSL
QTFKLFIGKFSSDLTWLMTASVLKEATFDVRSIHNQIVYEIVDDDLVKKESNPNQHSHSV
NFKLEDGVQTTTVFQFSRDIPDVNSTSDLSEAGPLVLYDLMGPRRSKRRFVQPERYYGCD
DDMAEFDVEMTRLVGGRRKVEYEELPLALSIQADHAYRTGEIDEIARSYKRELFGGSIRP
HEKSSESSSGWRNALKSDVNKLADKKSVTADSQHQLAIVPLHPSSGTDLTVHEQVPLDVD
VPEHLSAEIGEIVSRYIYFNSSSTSHDRKASKMNFTKPEARRWGQVKISKLKFMGLDRRG
GALGSHKKYKRNSSKKDSIYDIRSFKKGSVAANVYKELIRRCMANIDATLNKEQPPIIDQ
WKEFQSTKSDHRESGDHLAMNRDEEVSEIDMLWKEMELALASCYLLDDSEDSHVQYASNV
RIGAEIRGEVCRHDYRLNEEIGIICRLCGFVSTEIKDVPPPFMPSSNYSSNKEQRTEEAT
DHKQDDDGLDTLSIPVSSRAPSSSGGGEGNVWELIPDLGKKLRVHQKRAFEFLWKNIAGS
IVPAEMQPESKERGGCVISHTPGAGKTLLIISFLVSYLKLFPGSRPLVLAPKTTLYTWYK
EVLKWKIPVPVYQIHGGQTFKGEVLREKVKLCPGLPRNQDVMHVLDCLEKMQMWLSQPSV
LLMGYTSFLTLTREDSPYAHRKYMAQVLRHCPGLLILDEGHNPRSTKSRLRKGLMKVNTR
LRILLSGTLFQNNFGEYFNTLTLARPTFVDEVLKELDPKYKKKNKGASRFSLENRARKMF
IDKISTVIDSDIPKKRKEGLNILKKLTGGFIDVHDGGTSDNLPGLQCYTLMMKSTTLQQE
ILVKLQNQRPIYKGFPLELELLITLGAIHPWLIRTTACSSQYFKEEELEALQKFKFDLKL
GSKVKFVMSLIPRCLLRREKVLIFCHNIAPINLFLEIFERFYGWRKGIEVLVLQGDIELF
QRGRIMDLFEEPGGPSKVMLASITTCAEGISLTAASRVILLDSEWNPSKSKQAIARAFRP
GQDKVVYVYQLLATGTLEEEKYKRTTWKEWVSSMIFSEDLVEDPSHWQAPKIEDELLREI
VEEDRATLFHAIMKNEKASNMGSLQE*

Transcript Sequence

Transcript ID

PGSC0003DMT400061540
Transcript Infomation

pacid=37454302 locus=PGSC0003DMG400023950 ID=PGSC0003DMT400061540.v4.03 annot-version=v4.03
Sequence

ATGAAGAGGCATATACATTACAATGCTCATCCAATTGATCCACACCCTTTTGAGGCATTC
TGGTACGGATCTTGGCAAGCTGTGGAGCGCCTAAGGATCAATATGGGGACCATCACTACT
CATGTTCTAGTTGATGGGGAGGTGATTGAGGAGAATATTCCGGTAACAAATCTTCGAATG
AGGTCTAGAAAAGCTACTTTATCTGATTGTGCCTGCTTCTTACGACCTGGACTTGAGGTT
TGTGTGCTTTCAATCCCTTACCAAGGAGAAGATTCAGGGGATGAGAAAGATGTCAAGCCT
GTGTGGATTGATGGAAAAATAAGATCTATAGAGAGGAAGCCTCATGAGCTCACTTGTACT
TGCGAATTTCATGTCAGCGTTTATGTCACTCAAGGCCCTCCTCCCATTTTGAAGAAAACC
CTAAGTAAAGAGATAAAGATGTTGCCCATTGATCAGATTGCAGTTCTCCAAAAACTTGAA
CCTAAACCTTGTGAAGACAAACATTACCGTTGGAGTTCTTCTGAGGACTGCAATTCGTTG
CAGACTTTTAAACTATTCATAGGAAAATTCTCCTCTGACCTCACATGGTTAATGACTGCA
TCTGTCCTGAAAGAAGCTACATTTGATGTAAGATCGATCCATAACCAGATTGTCTATGAG
ATTGTGGATGATGATCTAGTCAAGAAAGAATCAAATCCAAACCAACATTCTCACTCCGTG
AATTTCAAGTTAGAAGACGGAGTTCAAACAACCACTGTTTTTCAATTCAGTAGGGATATC
CCAGATGTAAATTCTACCAGTGACCTTAGTGAAGCTGGGCCTCTAGTTCTGTATGATCTA
ATGGGCCCACGAAGGTCAAAGCGTCGATTTGTACAGCCAGAGCGTTATTATGGATGTGAT
GATGATATGGCAGAATTTGATGTTGAGATGACAAGGTTAGTTGGGGGTAGGAGAAAAGTG
GAGTATGAAGAACTACCACTTGCACTTTCTATTCAGGCTGATCATGCTTATCGAACTGGT
GAAATCGATGAAATTGCCAGGTCTTACAAGAGAGAGTTGTTTGGAGGAAGTATCAGACCT
CATGAGAAGTCCTCTGAAAGTTCATCCGGATGGAGAAATGCACTCAAATCAGATGTAAAT
AAGCTTGCAGACAAGAAATCAGTTACAGCTGACAGTCAACATCAACTTGCTATTGTTCCC
CTGCATCCTTCTTCAGGAACTGATTTAACTGTCCATGAACAGGTTCCGCTTGATGTTGAT
GTTCCTGAACATTTGTCTGCAGAGATTGGTGAAATAGTTTCCAGATATATTTATTTCAAT
AGTTCTTCAACATCGCATGATAGGAAAGCTTCCAAAATGAACTTCACAAAACCAGAAGCT
AGACGCTGGGGTCAAGTCAAAATTTCAAAGTTAAAGTTCATGGGACTTGATCGAAGAGGT
GGGGCGTTAGGTTCACATAAGAAATACAAAAGAAATAGTTCAAAGAAGGATAGTATTTAT
GATATAAGATCATTCAAAAAGGGTTCTGTAGCGGCTAATGTGTACAAGGAATTGATTAGA
AGGTGCATGGCGAACATTGATGCCACACTTAATAAGGAACAGCCACCAATAATTGATCAG
TGGAAAGAGTTTCAGTCAACAAAATCTGACCACAGAGAGTCAGGTGATCATCTCGCAATG
AATAGGGACGAAGAGGTTTCAGAAATTGATATGTTATGGAAGGAGATGGAACTAGCCCTG
GCATCATGTTATCTTCTAGATGACAGTGAGGATTCCCATGTTCAATATGCAAGTAATGTC
AGGATAGGAGCTGAAATACGTGGAGAAGTTTGTCGACATGATTATCGACTGAATGAAGAA
ATTGGAATTATTTGCCGGCTATGTGGATTCGTTAGCACCGAAATAAAGGATGTTCCACCA
CCCTTTATGCCTTCGTCAAACTACAGTTCCAACAAGGAGCAAAGAACTGAAGAAGCTACA
GATCACAAGCAGGATGATGATGGCCTTGATACTCTGTCCATTCCTGTTTCTTCCAGAGCA
CCCTCATCATCAGGAGGAGGGGAAGGAAATGTCTGGGAGTTGATACCTGATCTAGGAAAA
AAATTACGGGTACACCAAAAGAGAGCCTTTGAATTTCTGTGGAAAAATATTGCTGGATCC
ATAGTACCTGCAGAAATGCAACCAGAGAGCAAAGAGAGAGGTGGCTGTGTTATTTCTCAT
ACTCCAGGAGCTGGGAAAACCTTACTAATTATTTCCTTCCTTGTAAGCTATCTGAAGTTA
TTTCCTGGATCACGACCATTGGTCCTTGCTCCCAAGACAACACTCTACACCTGGTACAAA
GAAGTACTAAAGTGGAAGATTCCTGTGCCAGTCTACCAAATTCATGGTGGTCAAACCTTT
AAGGGAGAGGTTCTAAGGGAAAAGGTGAAATTATGTCCTGGTCTTCCTCGCAACCAAGAT
GTCATGCATGTCTTGGACTGCCTTGAGAAAATGCAGATGTGGCTTTCGCAACCCAGTGTT
CTCCTTATGGGTTATACCTCTTTTTTAACACTGACACGGGAAGATTCACCTTATGCGCAT
AGGAAATATATGGCCCAGGTGTTGCGGCATTGTCCAGGGCTACTCATACTTGATGAAGGG
CACAACCCAAGAAGTACAAAATCCAGGTTAAGAAAGGGTCTAATGAAGGTCAATACACGG
CTTAGGATATTACTTTCTGGTACATTATTTCAGAATAATTTTGGAGAGTATTTCAATACA
CTTACCTTAGCAAGGCCAACCTTTGTTGATGAGGTCTTGAAGGAGCTGGATCCCAAGTAC
AAGAAGAAAAACAAAGGTGCATCGCGCTTTTCATTGGAAAATCGAGCAAGAAAGATGTTT
ATTGATAAAATTTCAACCGTCATTGATTCAGACATCCCCAAGAAAAGGAAAGAAGGCCTA
AACATATTGAAGAAACTAACAGGTGGATTCATAGATGTGCATGACGGTGGAACATCTGAT
AACCTTCCTGGTTTACAATGTTACACCTTGATGATGAAATCAACTACTCTTCAACAAGAA
ATTTTGGTGAAGCTTCAAAATCAAAGGCCCATCTACAAAGGATTTCCTCTGGAGTTAGAG
CTGTTGATTACCCTTGGTGCAATCCATCCTTGGTTGATCAGAACGACAGCATGTTCTAGC
CAGTACTTCAAGGAAGAGGAGCTGGAGGCTCTCCAGAAATTCAAGTTTGATCTGAAGCTG
GGTTCAAAAGTCAAATTTGTAATGAGCCTAATTCCTCGTTGTCTCCTCAGGAGAGAAAAG
GTTTTGATATTTTGCCACAATATTGCTCCAATTAATCTTTTTCTGGAGATATTTGAGAGG
TTCTATGGGTGGAGAAAGGGCATCGAAGTACTGGTGCTTCAAGGTGACATTGAGCTTTTT
CAAAGAGGAAGGATAATGGATCTATTTGAGGAGCCAGGTGGACCATCAAAGGTTATGTTG
GCATCCATTACAACTTGTGCAGAAGGCATTAGCTTGACCGCAGCATCACGTGTAATATTA
CTGGATTCAGAGTGGAATCCTTCTAAGAGCAAGCAAGCCATTGCACGAGCTTTTCGTCCT
GGTCAGGACAAAGTTGTGTATGTCTACCAGCTTCTGGCAACGGGCACACTGGAAGAGGAG
AAATACAAAAGAACAACATGGAAAGAATGGGTATCAAGCATGATATTCAGTGAAGACCTT
GTGGAGGACCCTTCTCACTGGCAAGCTCCAAAAATTGAAGATGAATTATTGAGAGAAATT
GTTGAGGAGGATCGAGCTACATTATTCCATGCCATTATGAAAAATGAGAAGGCTTCCAAC
ATGGGAAGTCTGCAGGAATGA