Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061517
CDS Infomation

pacid=37453151 polypeptide=PGSC0003DMP400041387 locus=PGSC0003DMG400023943 ID=PGSC0003DMT400061517.v4.03 annot-version=v4.03
Sequence

ATGAAGGCCAACTCTGGCCGTTCTATCTCTTCTAAATCACTGCACTTATATGTTCCACCG
GCAACTCTGCTCCGGCGAAAGTATTTAATCAGAAGAAGACTCAATTTCCCCCGCTGCTTG
GTTCACGAGCATAGCCACGTCAGCTTTTCAGTTCGTTGTTCTCAGACCCCCGCCGACGGC
ATCGATAACTCCGACGAGCTAATTCTGAAGCAAAACTCCTCGACTACTAGGCGTAATGTA
CTCCTCATGCCTCTTCTCACCATCGGAGTTTGTGCTCTCCGTTCCGCAATTGCTAGAGCG
GACGACAAACCACCGCCTGAGAGTACGCCGCAACCTCCGGTGACTACAGTGGAGGCTCCG
CCGCCTGATCCGGTGGTTAAGGCGGAGGAAGTGATTAATTCAAGGATTTATGATGCGACG
GTAATTGGAGAGCCTTTGGCTTTGGGGAAGGACAAGAAGAAAGTCTGGGAGAAGCTCATG
AATGCTCGGGTCGTGTATTTAGGCGAAGCCGAGCAAGTGCCAACTCAAGATGATAAAGAA
GTGGAGCTGGAGATCGTGAAGAATTTGAGGAAGAGATGCGCCGAAGCAGAGCGGTCGATT
TCGTTGGCTCTAGAAGCATTTCCGTCTAATTTACAAGAACAACTAAATCAATACTTGGCA
AAAAGGATTGATGGAGAGAGTTTGAAATCTTATGTTGCACATTGGCCAACTCAATATTGG
CATGATTATGAGCCCTTATTGACTTATTGTCGCGAAAATGGGGTTCGACTAGTTGCATGT
GGTTTGCCTCTAGAGGTCCTACGAACAGTTCAAGCAGAAGGTATTCGGGGGCTTTCAAAA
GCTGATCGTAAGAAATATGCTCCTCCAGCCGGTTCAGGTTTCATCTCAGGCTTTTCGTCT
ATGTCACGCAGATCATCTGTTGATGTAAATATGCTGAACCAGCCTACTCCTTTCGGACCA
AGCTCATATCTCTCTGCACAAGCAAAAGTTGTTGAAGAGTACAACATGTCCCAGATAGTT
TTAAAAGCAGTGATGGATGATGGGACGGCTGGGATGCTTGTAGTTGTCACAGGTGCTACC
CATGTCATGTATGGATCAAGAGGGACTGGGGTGCCTGCTAGAATTTCAAGGAAGATACAA
AAGAAAAATCAAATAGTCATACTACTTGACCCTGAAAGACAATGGCTAAGGAGGGAGGGA
GAAGTTCCTGTTGCTGATTTCCTGTGGTACTCTGCAGCTAGACCTTGTAGCAGAAATTGT
TTTGATCGTGCAGAAATTGCCCGTGTAATGAATGCTGCTGGCAGGAGACGAGATGCCTTA
CCTCAGGACCTTCAAAATGGACTAGATCTTGGTGTGGTACCCCCGGAAGTGCTGCAGAAC
TTTTTTGATCTAGAGCAATATCCTTTCATTTCAGAGTTAACAGACCGCTTTCAGGGTTTT
AGAGAGAGATTGTTGGCTGATCCTAAATTTCTACATCGATTAGCTATTGAAGAATCTATA
TCAATAACAACTACTCTGTTGGCACAGTATGAGAAGCGTAAAGAGAATTTTTTTGAGGAG
ATTGATTATGTTATTACAGACACTGTTAGGGGTATAGTTGTGGATTTTTTCACAGTGTGG
CTTCCTGCTCCAACGATTTCTTTCTTGTCAGTTACTGATGATGTTGATGCACCTGAGAGC
ATCGGAGCATTGAAAGGTCTCCTGGGTTCCATCCCAGATAATGCTTTTCAGAAAAGTCTT
GTTGGGAAGGACTGGGATGTGAGTCACAGAGTTGCCTCTGTGCTTGTTGGTGGCCTTAAA
TTGGCCGGTGTAGGATTTGTTTCTAGCATCGGGGCAGTGGCTTCATCAAATATCTTGTTT
GCAATGCGCAAAGTATTAAATCCGACCTTTACTACTGTCCAGAAGAACAAGCGATCACCA
ATATTGAAAACGGCGCTTGTGTATTCATCATTTCTTGGTACATCTGCAAATCTGCGTTAT
CAGGTTATTGCAGGATTGGTTGAGCACCGGATTGCAGATAAATTTTCTGACCAAACATTA
CTTGTAAATATGCTATCTTTTGTTGTTCGAACGATCAACTCCTATTGGGGAACCCAGCAA
TGGATTGACCTTGCACGGGTTACAGGATTGCAGGCTCGCAAGAGCGAGCAAGTTTCTGAT
CTTGCTCCAGATTCTGCAAATCCTACTGCAGTTGGTTGCAAAACTCCAGAAGATACCAAT
ACTGATGAAATCAACAGTCAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400041387
PEP Infomation

pacid=37453151 transcript=PGSC0003DMT400061517 locus=PGSC0003DMG400023943 ID=PGSC0003DMT400061517.v4.03 annot-version=v4.03
Sequence

MKANSGRSISSKSLHLYVPPATLLRRKYLIRRRLNFPRCLVHEHSHVSFSVRCSQTPADG
IDNSDELILKQNSSTTRRNVLLMPLLTIGVCALRSAIARADDKPPPESTPQPPVTTVEAP
PPDPVVKAEEVINSRIYDATVIGEPLALGKDKKKVWEKLMNARVVYLGEAEQVPTQDDKE
VELEIVKNLRKRCAEAERSISLALEAFPSNLQEQLNQYLAKRIDGESLKSYVAHWPTQYW
HDYEPLLTYCRENGVRLVACGLPLEVLRTVQAEGIRGLSKADRKKYAPPAGSGFISGFSS
MSRRSSVDVNMLNQPTPFGPSSYLSAQAKVVEEYNMSQIVLKAVMDDGTAGMLVVVTGAT
HVMYGSRGTGVPARISRKIQKKNQIVILLDPERQWLRREGEVPVADFLWYSAARPCSRNC
FDRAEIARVMNAAGRRRDALPQDLQNGLDLGVVPPEVLQNFFDLEQYPFISELTDRFQGF
RERLLADPKFLHRLAIEESISITTTLLAQYEKRKENFFEEIDYVITDTVRGIVVDFFTVW
LPAPTISFLSVTDDVDAPESIGALKGLLGSIPDNAFQKSLVGKDWDVSHRVASVLVGGLK
LAGVGFVSSIGAVASSNILFAMRKVLNPTFTTVQKNKRSPILKTALVYSSFLGTSANLRY
QVIAGLVEHRIADKFSDQTLLVNMLSFVVRTINSYWGTQQWIDLARVTGLQARKSEQVSD
LAPDSANPTAVGCKTPEDTNTDEINSQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400061517
Transcript Infomation

pacid=37453151 locus=PGSC0003DMG400023943 ID=PGSC0003DMT400061517.v4.03 annot-version=v4.03
Sequence

ATGAAGGCCAACTCTGGCCGTTCTATCTCTTCTAAATCACTGCACTTATATGTTCCACCG
GCAACTCTGCTCCGGCGAAAGTATTTAATCAGAAGAAGACTCAATTTCCCCCGCTGCTTG
GTTCACGAGCATAGCCACGTCAGCTTTTCAGTTCGTTGTTCTCAGACCCCCGCCGACGGC
ATCGATAACTCCGACGAGCTAATTCTGAAGCAAAACTCCTCGACTACTAGGCGTAATGTA
CTCCTCATGCCTCTTCTCACCATCGGAGTTTGTGCTCTCCGTTCCGCAATTGCTAGAGCG
GACGACAAACCACCGCCTGAGAGTACGCCGCAACCTCCGGTGACTACAGTGGAGGCTCCG
CCGCCTGATCCGGTGGTTAAGGCGGAGGAAGTGATTAATTCAAGGATTTATGATGCGACG
GTAATTGGAGAGCCTTTGGCTTTGGGGAAGGACAAGAAGAAAGTCTGGGAGAAGCTCATG
AATGCTCGGGTCGTGTATTTAGGCGAAGCCGAGCAAGTGCCAACTCAAGATGATAAAGAA
GTGGAGCTGGAGATCGTGAAGAATTTGAGGAAGAGATGCGCCGAAGCAGAGCGGTCGATT
TCGTTGGCTCTAGAAGCATTTCCGTCTAATTTACAAGAACAACTAAATCAATACTTGGCA
AAAAGGATTGATGGAGAGAGTTTGAAATCTTATGTTGCACATTGGCCAACTCAATATTGG
CATGATTATGAGCCCTTATTGACTTATTGTCGCGAAAATGGGGTTCGACTAGTTGCATGT
GGTTTGCCTCTAGAGGTCCTACGAACAGTTCAAGCAGAAGGTATTCGGGGGCTTTCAAAA
GCTGATCGTAAGAAATATGCTCCTCCAGCCGGTTCAGGTTTCATCTCAGGCTTTTCGTCT
ATGTCACGCAGATCATCTGTTGATGTAAATATGCTGAACCAGCCTACTCCTTTCGGACCA
AGCTCATATCTCTCTGCACAAGCAAAAGTTGTTGAAGAGTACAACATGTCCCAGATAGTT
TTAAAAGCAGTGATGGATGATGGGACGGCTGGGATGCTTGTAGTTGTCACAGGTGCTACC
CATGTCATGTATGGATCAAGAGGGACTGGGGTGCCTGCTAGAATTTCAAGGAAGATACAA
AAGAAAAATCAAATAGTCATACTACTTGACCCTGAAAGACAATGGCTAAGGAGGGAGGGA
GAAGTTCCTGTTGCTGATTTCCTGTGGTACTCTGCAGCTAGACCTTGTAGCAGAAATTGT
TTTGATCGTGCAGAAATTGCCCGTGTAATGAATGCTGCTGGCAGGAGACGAGATGCCTTA
CCTCAGGACCTTCAAAATGGACTAGATCTTGGTGTGGTACCCCCGGAAGTGCTGCAGAAC
TTTTTTGATCTAGAGCAATATCCTTTCATTTCAGAGTTAACAGACCGCTTTCAGGGTTTT
AGAGAGAGATTGTTGGCTGATCCTAAATTTCTACATCGATTAGCTATTGAAGAATCTATA
TCAATAACAACTACTCTGTTGGCACAGTATGAGAAGCGTAAAGAGAATTTTTTTGAGGAG
ATTGATTATGTTATTACAGACACTGTTAGGGGTATAGTTGTGGATTTTTTCACAGTGTGG
CTTCCTGCTCCAACGATTTCTTTCTTGTCAGTTACTGATGATGTTGATGCACCTGAGAGC
ATCGGAGCATTGAAAGGTCTCCTGGGTTCCATCCCAGATAATGCTTTTCAGAAAAGTCTT
GTTGGGAAGGACTGGGATGTGAGTCACAGAGTTGCCTCTGTGCTTGTTGGTGGCCTTAAA
TTGGCCGGTGTAGGATTTGTTTCTAGCATCGGGGCAGTGGCTTCATCAAATATCTTGTTT
GCAATGCGCAAAGTATTAAATCCGACCTTTACTACTGTCCAGAAGAACAAGCGATCACCA
ATATTGAAAACGGCGCTTGTGTATTCATCATTTCTTGGTACATCTGCAAATCTGCGTTAT
CAGGTTATTGCAGGATTGGTTGAGCACCGGATTGCAGATAAATTTTCTGACCAAACATTA
CTTGTAAATATGCTATCTTTTGTTGTTCGAACGATCAACTCCTATTGGGGAACCCAGCAA
TGGATTGACCTTGCACGGGTTACAGGATTGCAGGCTCGCAAGAGCGAGCAAGTTTCTGAT
CTTGCTCCAGATTCTGCAAATCCTACTGCAGTTGGTTGCAAAACTCCAGAAGATACCAAT
ACTGATGAAATCAACAGTCAATAG