Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061494
CDS Infomation

pacid=37458166 polypeptide=PGSC0003DMP400041369 locus=PGSC0003DMG400023930 ID=PGSC0003DMT400061494.v4.03 annot-version=v4.03
Sequence

ATGGCGCGGCGGCGAATAGGGATGAGAGAAATTTGTTGTTCACCAAAAAGTTCATCAAAA
TCTGATGGTCCTAATTCTCCATCTACTTCACTATTCTCTTCCCCTTCACGTTTCTCGTTT
TCGCCATCTCGTCCGAGTTTTTCCGATTCAGTTATGAATCGGACACTCGAGATGGCGGAA
CCGATGATCATGAAATGGGACCCTAACTCTACTAACTATGCTAAAGTAACTTCTCTTTTC
TACGAGAGTAGAGGAGAAGCTAATGAATTCATCAAGTGTGTGTATAATTTACAGAAGGCG
ATGCACTTTCATTCCATGGAAAATTCAAAATCAGATAAGCTTGTTCGTGCTCAATCGTTG
ATGCAAGTTGCAGTGAAGAGACTCCAGAAGGAGTTTTACCAGATTCTATCGATGAATAGA
GCTCATTTGGATCCTGAATCAATAACTACAGTTTCTTCTCGAACTTCAGCTCGTTCGAGT
TTGTCTGAGTTTGAAGATGAGGAAGAGGATGATCGTATTGTTGTTGTTGCTGGTGAGTCG
ATTTCTGAAGTAGAGGATGTATCGAATGTTGCAATGGCGGATTTGAGATTGATTGCTGAG
TGTATGATTTCTTCTGGATATGCGAAGGAGTGTGTGAAGATTTACAAAGTTATACGTAAA
TCGATTATCGATGAAGCGATTTATAGACTCGATGTTGAGAAATTGAGTTCTTCGCAAGTT
CATAAAATGGATTGGGAAGTTTTGGATCTGAAGATTAAGGATTGGCTTCGAGCAGCAGAT
GTAGCTGTGAAAATATTGTTCAATGGAGAGAGAATTCTCTGCGATCACGTTTTTTTGTCC
AACGATTCAATAAGAGAATCATGCTTTACTGAAATTTCAAAAGATGGATCCATGATTCTG
TTTAGTTTCCCGGAAATTGTAGCGAAAAACTGTAAGAAATCGCCGGAAAAAGTGTTCCGT
CTCCTCGATATGTACACCGCCATCGCTGAACACTGGCCGGAAATTGAAGCTATTTTTTCT
TCCGATTCAGAATCTGTTATCCGATCTCAAGCGTTAACGTCACACGACAAGCTTGGCGAG
TCTATAAGGACGGCGTTAGCTGAGTTTGAGACAGTTCTCCAGAAGGAATCCTCAAAAACA
CCGATCGCCGGCGGTGGAATCCACCATCTCACCGTTGATGTAATGGATTACGTTACTCTA
CTTGCCGATTACAGCAACGTCCTCTCCGATATCCTCGCTGAATCTCCTCCTCCGGCCAAA
GGTTCGTTGCCGGAATCATACTTCGGTATAGCCGATACCGATGAATCTCCGGCACCGGCA
ATCTCACTCCGATTCGCTTGGCTGATTCTCATTCTTCTCTGCAAACTCGACGGCAAAGCA
AAGCACTACAAGGACGCTTCCTTCGCGTACCTTTTCTTAGCCAACAATCTCCGATACATC
ATCGTAAAAGTCCGTTCATCGAATCTCAAATACTTGCTAGGTGAAAATTGGATATCAAAA
CACGAAGAAAAGGTGAAGCAGTTCGCGTCAAACTACGAACGGTTAGGATGGAGCCACGTC
ATTGAATCTGTCCCACGAGAACCAAACGCATCAATGGCTCCCCAACAAGTGAAGGAAATT
TTCAAGAGATTCAATTCATCATTCGAGCAAGCTCACCGAAAGCATTCAATGTGTGTGGTA
AGTGATAGTTATCTCCGTGATGAATTAAAAGTATCCATCGCGGAGAAAATACTACCAGCT
TATAGAGAGTTTTACAATAAACATAGAAATACAATAATAAAAGAGAGACATTCAGCTCAT
GTGGTTAGATTTTCTCCGGAGGATGTAGCACATCAATTATCCGATTTATTTTTCGGACCG
ATTGAATTAGAAAGATGTTTATCATTCGAGTTTTCTCCATCGCGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400041369
PEP Infomation

pacid=37458166 transcript=PGSC0003DMT400061494 locus=PGSC0003DMG400023930 ID=PGSC0003DMT400061494.v4.03 annot-version=v4.03
Sequence

MARRRIGMREICCSPKSSSKSDGPNSPSTSLFSSPSRFSFSPSRPSFSDSVMNRTLEMAE
PMIMKWDPNSTNYAKVTSLFYESRGEANEFIKCVYNLQKAMHFHSMENSKSDKLVRAQSL
MQVAVKRLQKEFYQILSMNRAHLDPESITTVSSRTSARSSLSEFEDEEEDDRIVVVAGES
ISEVEDVSNVAMADLRLIAECMISSGYAKECVKIYKVIRKSIIDEAIYRLDVEKLSSSQV
HKMDWEVLDLKIKDWLRAADVAVKILFNGERILCDHVFLSNDSIRESCFTEISKDGSMIL
FSFPEIVAKNCKKSPEKVFRLLDMYTAIAEHWPEIEAIFSSDSESVIRSQALTSHDKLGE
SIRTALAEFETVLQKESSKTPIAGGGIHHLTVDVMDYVTLLADYSNVLSDILAESPPPAK
GSLPESYFGIADTDESPAPAISLRFAWLILILLCKLDGKAKHYKDASFAYLFLANNLRYI
IVKVRSSNLKYLLGENWISKHEEKVKQFASNYERLGWSHVIESVPREPNASMAPQQVKEI
FKRFNSSFEQAHRKHSMCVVSDSYLRDELKVSIAEKILPAYREFYNKHRNTIIKERHSAH
VVRFSPEDVAHQLSDLFFGPIELERCLSFEFSPSR*

Transcript Sequence

Transcript ID

PGSC0003DMT400061494
Transcript Infomation

pacid=37458166 locus=PGSC0003DMG400023930 ID=PGSC0003DMT400061494.v4.03 annot-version=v4.03
Sequence

ATGGCGCGGCGGCGAATAGGGATGAGAGAAATTTGTTGTTCACCAAAAAGTTCATCAAAA
TCTGATGGTCCTAATTCTCCATCTACTTCACTATTCTCTTCCCCTTCACGTTTCTCGTTT
TCGCCATCTCGTCCGAGTTTTTCCGATTCAGTTATGAATCGGACACTCGAGATGGCGGAA
CCGATGATCATGAAATGGGACCCTAACTCTACTAACTATGCTAAAGTAACTTCTCTTTTC
TACGAGAGTAGAGGAGAAGCTAATGAATTCATCAAGTGTGTGTATAATTTACAGAAGGCG
ATGCACTTTCATTCCATGGAAAATTCAAAATCAGATAAGCTTGTTCGTGCTCAATCGTTG
ATGCAAGTTGCAGTGAAGAGACTCCAGAAGGAGTTTTACCAGATTCTATCGATGAATAGA
GCTCATTTGGATCCTGAATCAATAACTACAGTTTCTTCTCGAACTTCAGCTCGTTCGAGT
TTGTCTGAGTTTGAAGATGAGGAAGAGGATGATCGTATTGTTGTTGTTGCTGGTGAGTCG
ATTTCTGAAGTAGAGGATGTATCGAATGTTGCAATGGCGGATTTGAGATTGATTGCTGAG
TGTATGATTTCTTCTGGATATGCGAAGGAGTGTGTGAAGATTTACAAAGTTATACGTAAA
TCGATTATCGATGAAGCGATTTATAGACTCGATGTTGAGAAATTGAGTTCTTCGCAAGTT
CATAAAATGGATTGGGAAGTTTTGGATCTGAAGATTAAGGATTGGCTTCGAGCAGCAGAT
GTAGCTGTGAAAATATTGTTCAATGGAGAGAGAATTCTCTGCGATCACGTTTTTTTGTCC
AACGATTCAATAAGAGAATCATGCTTTACTGAAATTTCAAAAGATGGATCCATGATTCTG
TTTAGTTTCCCGGAAATTGTAGCGAAAAACTGTAAGAAATCGCCGGAAAAAGTGTTCCGT
CTCCTCGATATGTACACCGCCATCGCTGAACACTGGCCGGAAATTGAAGCTATTTTTTCT
TCCGATTCAGAATCTGTTATCCGATCTCAAGCGTTAACGTCACACGACAAGCTTGGCGAG
TCTATAAGGACGGCGTTAGCTGAGTTTGAGACAGTTCTCCAGAAGGAATCCTCAAAAACA
CCGATCGCCGGCGGTGGAATCCACCATCTCACCGTTGATGTAATGGATTACGTTACTCTA
CTTGCCGATTACAGCAACGTCCTCTCCGATATCCTCGCTGAATCTCCTCCTCCGGCCAAA
GGTTCGTTGCCGGAATCATACTTCGGTATAGCCGATACCGATGAATCTCCGGCACCGGCA
ATCTCACTCCGATTCGCTTGGCTGATTCTCATTCTTCTCTGCAAACTCGACGGCAAAGCA
AAGCACTACAAGGACGCTTCCTTCGCGTACCTTTTCTTAGCCAACAATCTCCGATACATC
ATCGTAAAAGTCCGTTCATCGAATCTCAAATACTTGCTAGGTGAAAATTGGATATCAAAA
CACGAAGAAAAGGTGAAGCAGTTCGCGTCAAACTACGAACGGTTAGGATGGAGCCACGTC
ATTGAATCTGTCCCACGAGAACCAAACGCATCAATGGCTCCCCAACAAGTGAAGGAAATT
TTCAAGAGATTCAATTCATCATTCGAGCAAGCTCACCGAAAGCATTCAATGTGTGTGGTA
AGTGATAGTTATCTCCGTGATGAATTAAAAGTATCCATCGCGGAGAAAATACTACCAGCT
TATAGAGAGTTTTACAATAAACATAGAAATACAATAATAAAAGAGAGACATTCAGCTCAT
GTGGTTAGATTTTCTCCGGAGGATGTAGCACATCAATTATCCGATTTATTTTTCGGACCG
ATTGAATTAGAAAGATGTTTATCATTCGAGTTTTCTCCATCGCGATAA