Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061493
CDS Infomation

pacid=37454749 polypeptide=PGSC0003DMP400041368 locus=PGSC0003DMG402023929 ID=PGSC0003DMT400061493.v4.03 annot-version=v4.03
Sequence

ATGAAATTGCACAAACAGTCAAGTAGAAGAGATGAGGAATTACCCAATTCCCAACCATAC
TCACCAAAGACCTTGAAATACCCAAACAGATCTCTTCCCAGATCCATCAATTATCTCCTC
AAAGAACAAAGACTTTTGTTCATTCTTGTTGGTATTCTAATTGGTTCAACTTTTTTCATC
ATTCAACCCAGTCTTTCTCATCTTAGCACATCTTCTGAACCACATTCTTCAATACCCAGA
TCATATAATGCTTTAAATCATGAATCTTTGTCAACATTGTCTTCATATAATGATAAAGAT
TTCAGCTTTAGGGTAAATGGGGGTACTGGGAGGGTGCCAGTTGGGGTTGGGAGGAAAAGG
ATGAGGATTGTGGTGACTGGTGGTGCTGGATTTGTAGGGAGTCATTTAGTGGATAAGTTA
ATTAAGAGAGGTGATGATGTTATTGTGATTGATAATTTCTTTACTGGTAGGAAAGAAAAT
GTGAAACATCATTTTGGGAATCCAAGATTTGAGCTTATTAGGCATGATGTTGTTGAGCCT
ATTTTGTTGGAAGTGGATCAGATTTACCATTTGGCTTGTCCTGCTTCTCCAGTTCACTAC
AAGTATAATCCTGTCAAAACTATTAAGACAAATGTGATGGGCACCCTTAACATGTTGGGG
CTTGCCAAGAGAATTGGCGCTAAGTTCTTGCTTACTAGTACAAGTGAGGTTTATGGTGAT
CCGCTTGAGCATCCTCAAAAGGAAACATATTGGGGTCATGTGAATCCAATAGGTGTTAGG
AGCTGCTATGACGAGGGAAAGCGGACTGCGGAAACCTTGACTATGGATTACTATCGCGGT
GCAAATGTCGAGGTTCGTATTGCTCGGATTTTCAATACATATGGACCTCGTATGTGTCTA
GATGATGGACGTGTTGTCAGCAACTTTGTTGCCCAGGCCATCCGCAAGCAACCGATGACA
GTATATGGTGATGGAAAGCAAACTCGAAGTTTTCAATTTGTCTCTGATCTGGTTGATGGA
TTGGTGGCCCTCATGGAGGGTGAGCACATTGGCCCTTTCAACTTGGGAAATCCAGGAGAA
TTCACCATGTTGGAGCTTGCTGGGGTGGTGAAAGAAGTGATTGATCCGAGTGCGACTATT
GAGTTCAAAGCCAACACCGCGGATGATCCTCACAAGAGGAAACCTGATATTAGCAAAGCA
AAGGAGCTACTAAACTGGGAACCAAAAATATCGTTGCAAGAGGGGCTTCCTCTCATGGTC
AATGATTTCCGCAATCGTATCTTGAATGAAGATGAAGGCAAAGGGAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400041368
PEP Infomation

pacid=37454749 transcript=PGSC0003DMT400061493 locus=PGSC0003DMG402023929 ID=PGSC0003DMT400061493.v4.03 annot-version=v4.03
Sequence

MKLHKQSSRRDEELPNSQPYSPKTLKYPNRSLPRSINYLLKEQRLLFILVGILIGSTFFI
IQPSLSHLSTSSEPHSSIPRSYNALNHESLSTLSSYNDKDFSFRVNGGTGRVPVGVGRKR
MRIVVTGGAGFVGSHLVDKLIKRGDDVIVIDNFFTGRKENVKHHFGNPRFELIRHDVVEP
ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRIGAKFLLTSTSEVYGD
PLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTMDYYRGANVEVRIARIFNTYGPRMCL
DDGRVVSNFVAQAIRKQPMTVYGDGKQTRSFQFVSDLVDGLVALMEGEHIGPFNLGNPGE
FTMLELAGVVKEVIDPSATIEFKANTADDPHKRKPDISKAKELLNWEPKISLQEGLPLMV
NDFRNRILNEDEGKGN*

Transcript Sequence

Transcript ID

PGSC0003DMT400061493
Transcript Infomation

pacid=37454749 locus=PGSC0003DMG402023929 ID=PGSC0003DMT400061493.v4.03 annot-version=v4.03
Sequence

ATGAAATTGCACAAACAGTCAAGTAGAAGAGATGAGGAATTACCCAATTCCCAACCATAC
TCACCAAAGACCTTGAAATACCCAAACAGATCTCTTCCCAGATCCATCAATTATCTCCTC
AAAGAACAAAGACTTTTGTTCATTCTTGTTGGTATTCTAATTGGTTCAACTTTTTTCATC
ATTCAACCCAGTCTTTCTCATCTTAGCACATCTTCTGAACCACATTCTTCAATACCCAGA
TCATATAATGCTTTAAATCATGAATCTTTGTCAACATTGTCTTCATATAATGATAAAGAT
TTCAGCTTTAGGGTAAATGGGGGTACTGGGAGGGTGCCAGTTGGGGTTGGGAGGAAAAGG
ATGAGGATTGTGGTGACTGGTGGTGCTGGATTTGTAGGGAGTCATTTAGTGGATAAGTTA
ATTAAGAGAGGTGATGATGTTATTGTGATTGATAATTTCTTTACTGGTAGGAAAGAAAAT
GTGAAACATCATTTTGGGAATCCAAGATTTGAGCTTATTAGGCATGATGTTGTTGAGCCT
ATTTTGTTGGAAGTGGATCAGATTTACCATTTGGCTTGTCCTGCTTCTCCAGTTCACTAC
AAGTATAATCCTGTCAAAACTATTAAGACAAATGTGATGGGCACCCTTAACATGTTGGGG
CTTGCCAAGAGAATTGGCGCTAAGTTCTTGCTTACTAGTACAAGTGAGGTTTATGGTGAT
CCGCTTGAGCATCCTCAAAAGGAAACATATTGGGGTCATGTGAATCCAATAGGTGTTAGG
AGCTGCTATGACGAGGGAAAGCGGACTGCGGAAACCTTGACTATGGATTACTATCGCGGT
GCAAATGTCGAGGTTCGTATTGCTCGGATTTTCAATACATATGGACCTCGTATGTGTCTA
GATGATGGACGTGTTGTCAGCAACTTTGTTGCCCAGGCCATCCGCAAGCAACCGATGACA
GTATATGGTGATGGAAAGCAAACTCGAAGTTTTCAATTTGTCTCTGATCTGGTTGATGGA
TTGGTGGCCCTCATGGAGGGTGAGCACATTGGCCCTTTCAACTTGGGAAATCCAGGAGAA
TTCACCATGTTGGAGCTTGCTGGGGTGGTGAAAGAAGTGATTGATCCGAGTGCGACTATT
GAGTTCAAAGCCAACACCGCGGATGATCCTCACAAGAGGAAACCTGATATTAGCAAAGCA
AAGGAGCTACTAAACTGGGAACCAAAAATATCGTTGCAAGAGGGGCTTCCTCTCATGGTC
AATGATTTCCGCAATCGTATCTTGAATGAAGATGAAGGCAAAGGGAACTAA