Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061466
CDS Infomation

pacid=37456076 polypeptide=PGSC0003DMP400041348 locus=PGSC0003DMG400023918 ID=PGSC0003DMT400061466.v4.03 annot-version=v4.03
Sequence

ATGTCTAATCTTGGTGGAGGTGACGACATGTCTTCAGCTAGTGATCTTCCATTTTTAGGC
CCAAGAAACAACATGGAACTTCAAGAATTTGGAAGAAAACCAAGGCACAATGTCTCTATC
ACACTAGGTGAGCTATTGAAACGCCTTGGCGACTCTGCTGAGGAAAAAAACCAAGTTCTT
GAACTTGGGAATCACTCCAATTATACTACTACTACTCCTTCATCATTTCCCTTTGTTCTT
TCCTTTCACAATCTAACCTATAGTGTTAAAGTCAAAAGTAAAATATCACTTCCTAGGTGG
TTGAGGAGGGGCGATAAAGACGATGAGTTGTCATCTGATAATAACATGAAGGTGTTGTTG
AATGACATATCAGGAGAAGCCAGAGAAGGTGAAATCATGGCTGTTCTTGGAGCTAGTGGA
TCGGGAAAATCAACGTTGATTGATGCCCTTGCTGATCGAATATCAAGGGAAAGTCTTAAA
GGGAATGTTACTTTGAATGGTGAAGTTCTTGAATCAAAGCTTCTCAAGGTTATCTCAGCA
TATGTTATGCAAGATGATCTTTTGTTCCCAATGTTAACAGTTGAAGAAACACTCATGTTC
TCAGCCGAGTTTCGTCTTCCAAGGACTTTATCTAAGTCCAAGAAGAATGCTAGAGTTCAA
GCATTGATCGATCAACTAGGCCTTAGAAATGCTGCCAAGACAGTGATTGGTGATGAAGGC
CATAGAGGAGTTTCTGGTGGCGAAAGAAGGCGTGTTTCTATTGGTATTGACATAATTCAT
GACCCTATTGTCCTGTTTCTTGATGAGCCAACTTCAGGACTTGATTCCACTAGTGCATAT
ATGGTGGTAAAAGTCTTGCAAAGAATAGCACAAAGCGGAAGTATTGTGATCATGTCAATT
CATCAGCCAAGTTATAGAATTTTGAGTCTTTTGGACCGTTTAATCATCCTTTCGCGTGGA
CACACGGTCTTGACTAGCCCTCCTTCAAGTCTACAACAATTTTTTGCTGATTTTGGGAAT
CCAATTCCTGAAAATGAAAACAGGATAGAGTTTGCTTTGGATTTCATCAGAGAACTCGAA
GGAACTCCAAATGGAACCAAGACTTTGATGGAATTCAATAAAACATGGCAAAGGGAAAGA
AACTCAACAACTAGCACCAGCAGCTTTTACAATGGACCAAAACCATCACTTAAAGATGCA
ATAAGTGCAAGTGTTTCAAGAGGGAAATTAGTCTCAGGAGCAACGAATATCGACCCAAAT
GTCTCTTCTTCAAACGTTCCAAAATTTGCTAATCCATTTTGGGTAGATATGGTTGTGATA
GCCAAAAGATCAATGTTGAATTCCATGAGAATGCCTGAGCTATTTGGTATGCGTTTTGGC
GCTGTCGTTGTCACTGGGATTATCCTAGCCACAATTTTTTGGAAATTAGACAATTCTCCA
AAAGGGGTTCAAGAAAGGTTAGGCTTTTTTGCCTTTGCAATGTCCACAACTTTTTACACT
TGTGCTGAAGCCATTCCTGTTTTTCTTCAAGAAAGGTATATTTTCATGAGAGAGACTGCT
CATAACGCTTATCGTCGTTCCTCTTATGTTGTTTCACATGCCATTATCTCACTTCCTTCC
ATATTAGTCCTCTCCATTGCCTTTGCTGTCACAACATATTGGTCAGTTGGACTAGCCGGT
GGCGTTTCAGGTTTCCTTTACTTCTTGCTCTTCTTACTTGCCTCATTTTGGGCAGGGAGT
TCATTTGTCACATTCCTCTCTGGTGTCATCTACAACATCATGATGGCCTACACAGTCGTG
GTCGCGGTCTTAGCTTACTTCTTTCTCTTCAGTGGCTTCTTCATTAGTCGCGATCGAATA
CCTCCTTATTGGATATGGTTTCACTATATGTCCTTAGTGAAATACCCTTACCAAGGGGTG
TTACAAAATGAATTTTCTGATCCCAACAAGTGTTTTGTAAAGGGTGTCCAGCTTTTCGAC
ACCTCGCCATTGAGGGCTGTCCCTGAGGCCTTAAAGATCAAGTTGTTGCAAAACATGAGC
AAGACATTGGGAATGAACATAACAAACACAACATGTTTGACAACAGGATCAGATATATTG
AAGCAAAGTGGTGGGACTGACTTGAACAAATGGACTTGTTTTTGGATCACAATTGGTTTG
GGATTTTTCTTTAGGATTCTCTTCTATTTTGCTTTGTTGATTGGAAGCAAAAATAAGAGG
AGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400041348
PEP Infomation

pacid=37456076 transcript=PGSC0003DMT400061466 locus=PGSC0003DMG400023918 ID=PGSC0003DMT400061466.v4.03 annot-version=v4.03
Sequence

MSNLGGGDDMSSASDLPFLGPRNNMELQEFGRKPRHNVSITLGELLKRLGDSAEEKNQVL
ELGNHSNYTTTTPSSFPFVLSFHNLTYSVKVKSKISLPRWLRRGDKDDELSSDNNMKVLL
NDISGEAREGEIMAVLGASGSGKSTLIDALADRISRESLKGNVTLNGEVLESKLLKVISA
YVMQDDLLFPMLTVEETLMFSAEFRLPRTLSKSKKNARVQALIDQLGLRNAAKTVIGDEG
HRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSI
HQPSYRILSLLDRLIILSRGHTVLTSPPSSLQQFFADFGNPIPENENRIEFALDFIRELE
GTPNGTKTLMEFNKTWQRERNSTTSTSSFYNGPKPSLKDAISASVSRGKLVSGATNIDPN
VSSSNVPKFANPFWVDMVVIAKRSMLNSMRMPELFGMRFGAVVVTGIILATIFWKLDNSP
KGVQERLGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAHNAYRRSSYVVSHAIISLPS
ILVLSIAFAVTTYWSVGLAGGVSGFLYFLLFLLASFWAGSSFVTFLSGVIYNIMMAYTVV
VAVLAYFFLFSGFFISRDRIPPYWIWFHYMSLVKYPYQGVLQNEFSDPNKCFVKGVQLFD
TSPLRAVPEALKIKLLQNMSKTLGMNITNTTCLTTGSDILKQSGGTDLNKWTCFWITIGL
GFFFRILFYFALLIGSKNKRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400061466
Transcript Infomation

pacid=37456076 locus=PGSC0003DMG400023918 ID=PGSC0003DMT400061466.v4.03 annot-version=v4.03
Sequence

ATGTCTAATCTTGGTGGAGGTGACGACATGTCTTCAGCTAGTGATCTTCCATTTTTAGGC
CCAAGAAACAACATGGAACTTCAAGAATTTGGAAGAAAACCAAGGCACAATGTCTCTATC
ACACTAGGTGAGCTATTGAAACGCCTTGGCGACTCTGCTGAGGAAAAAAACCAAGTTCTT
GAACTTGGGAATCACTCCAATTATACTACTACTACTCCTTCATCATTTCCCTTTGTTCTT
TCCTTTCACAATCTAACCTATAGTGTTAAAGTCAAAAGTAAAATATCACTTCCTAGGTGG
TTGAGGAGGGGCGATAAAGACGATGAGTTGTCATCTGATAATAACATGAAGGTGTTGTTG
AATGACATATCAGGAGAAGCCAGAGAAGGTGAAATCATGGCTGTTCTTGGAGCTAGTGGA
TCGGGAAAATCAACGTTGATTGATGCCCTTGCTGATCGAATATCAAGGGAAAGTCTTAAA
GGGAATGTTACTTTGAATGGTGAAGTTCTTGAATCAAAGCTTCTCAAGGTTATCTCAGCA
TATGTTATGCAAGATGATCTTTTGTTCCCAATGTTAACAGTTGAAGAAACACTCATGTTC
TCAGCCGAGTTTCGTCTTCCAAGGACTTTATCTAAGTCCAAGAAGAATGCTAGAGTTCAA
GCATTGATCGATCAACTAGGCCTTAGAAATGCTGCCAAGACAGTGATTGGTGATGAAGGC
CATAGAGGAGTTTCTGGTGGCGAAAGAAGGCGTGTTTCTATTGGTATTGACATAATTCAT
GACCCTATTGTCCTGTTTCTTGATGAGCCAACTTCAGGACTTGATTCCACTAGTGCATAT
ATGGTGGTAAAAGTCTTGCAAAGAATAGCACAAAGCGGAAGTATTGTGATCATGTCAATT
CATCAGCCAAGTTATAGAATTTTGAGTCTTTTGGACCGTTTAATCATCCTTTCGCGTGGA
CACACGGTCTTGACTAGCCCTCCTTCAAGTCTACAACAATTTTTTGCTGATTTTGGGAAT
CCAATTCCTGAAAATGAAAACAGGATAGAGTTTGCTTTGGATTTCATCAGAGAACTCGAA
GGAACTCCAAATGGAACCAAGACTTTGATGGAATTCAATAAAACATGGCAAAGGGAAAGA
AACTCAACAACTAGCACCAGCAGCTTTTACAATGGACCAAAACCATCACTTAAAGATGCA
ATAAGTGCAAGTGTTTCAAGAGGGAAATTAGTCTCAGGAGCAACGAATATCGACCCAAAT
GTCTCTTCTTCAAACGTTCCAAAATTTGCTAATCCATTTTGGGTAGATATGGTTGTGATA
GCCAAAAGATCAATGTTGAATTCCATGAGAATGCCTGAGCTATTTGGTATGCGTTTTGGC
GCTGTCGTTGTCACTGGGATTATCCTAGCCACAATTTTTTGGAAATTAGACAATTCTCCA
AAAGGGGTTCAAGAAAGGTTAGGCTTTTTTGCCTTTGCAATGTCCACAACTTTTTACACT
TGTGCTGAAGCCATTCCTGTTTTTCTTCAAGAAAGGTATATTTTCATGAGAGAGACTGCT
CATAACGCTTATCGTCGTTCCTCTTATGTTGTTTCACATGCCATTATCTCACTTCCTTCC
ATATTAGTCCTCTCCATTGCCTTTGCTGTCACAACATATTGGTCAGTTGGACTAGCCGGT
GGCGTTTCAGGTTTCCTTTACTTCTTGCTCTTCTTACTTGCCTCATTTTGGGCAGGGAGT
TCATTTGTCACATTCCTCTCTGGTGTCATCTACAACATCATGATGGCCTACACAGTCGTG
GTCGCGGTCTTAGCTTACTTCTTTCTCTTCAGTGGCTTCTTCATTAGTCGCGATCGAATA
CCTCCTTATTGGATATGGTTTCACTATATGTCCTTAGTGAAATACCCTTACCAAGGGGTG
TTACAAAATGAATTTTCTGATCCCAACAAGTGTTTTGTAAAGGGTGTCCAGCTTTTCGAC
ACCTCGCCATTGAGGGCTGTCCCTGAGGCCTTAAAGATCAAGTTGTTGCAAAACATGAGC
AAGACATTGGGAATGAACATAACAAACACAACATGTTTGACAACAGGATCAGATATATTG
AAGCAAAGTGGTGGGACTGACTTGAACAAATGGACTTGTTTTTGGATCACAATTGGTTTG
GGATTTTTCTTTAGGATTCTCTTCTATTTTGCTTTGTTGATTGGAAGCAAAAATAAGAGG
AGGTGA