Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061443
CDS Infomation

pacid=37455545 polypeptide=PGSC0003DMP400041339 locus=PGSC0003DMG400023913 ID=PGSC0003DMT400061443.v4.03 annot-version=v4.03
Sequence

ATGACTTCAAAACTCTCTTCTCGTTTAGCTTCTCGTCTAGCTTCCCATTTCCTTCGTTCT
GTCGTCACCGGCGCTGCTGCCACTACCACCGCTGCTCTATCCAAATCTCACCCTTTGATT
TCAGTTTTCCGCCACCAGTCTCGGCCCTTAGTATTTCCCCATTTCAATACCAACCAAACT
GTTTTCACCCTCAGATCCTTCTCCACACTCTCCCGGCCCGCACGATCCCACCGTTCAGCT
CGGCCTGATATCGCAGCCAAAGCCCGGCAACTCCAAACCCGCCGTCTGTGGACCTATGCC
ATTACCTTCAGCTGCATAGCAGGTTTCATAGTAATAGTCCTTAACCAATTCCAAGACCAA
CTTGTATTCTATTTAACCCCTACAGATGCTCTAGCAAAACATGCTGAGAACCCTACAAGA
TCCAAATTTCGACTTGGTGGATTAGTGCTAGAAAATAGTGTAACACCAATACCCAATTCC
CCAGAAATGGAATTTGTGATTACTGATTTGATTACTGATATTTTGGTTAAGTATGACGGG
TCGTTACCGGATCTTTTTCGGGAAGGGCATTCCGTTGTAGTAGAAGGGTTTATAAAGCCA
TTTACTGAAGAGATGAAGAAGAAAGAGAATGAAATCTTGAGTGAGAAAAAGTTACAGGTA
ACTGAGAAGGCGAGAAGTGGGGATTGTTATTTTGGAGCTACTGAAGTGTTGGCTAAACAC
GATGAGAAGTATATGCCTCCTGAAGTTGCAGCTGCACTTGAGAAGAATAAGCAGTTGCTT
AGTCAGATGGAAGGGAATGCGGAAGAGGGTGATGATGCAGCACCTCCAGCTACAGCGAGG
GCGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400041339
PEP Infomation

pacid=37455545 transcript=PGSC0003DMT400061443 locus=PGSC0003DMG400023913 ID=PGSC0003DMT400061443.v4.03 annot-version=v4.03
Sequence

MTSKLSSRLASRLASHFLRSVVTGAAATTTAALSKSHPLISVFRHQSRPLVFPHFNTNQT
VFTLRSFSTLSRPARSHRSARPDIAAKARQLQTRRLWTYAITFSCIAGFIVIVLNQFQDQ
LVFYLTPTDALAKHAENPTRSKFRLGGLVLENSVTPIPNSPEMEFVITDLITDILVKYDG
SLPDLFREGHSVVVEGFIKPFTEEMKKKENEILSEKKLQVTEKARSGDCYFGATEVLAKH
DEKYMPPEVAAALEKNKQLLSQMEGNAEEGDDAAPPATARA*

Transcript Sequence

Transcript ID

PGSC0003DMT400061443
Transcript Infomation

pacid=37455545 locus=PGSC0003DMG400023913 ID=PGSC0003DMT400061443.v4.03 annot-version=v4.03
Sequence

ATGACTTCAAAACTCTCTTCTCGTTTAGCTTCTCGTCTAGCTTCCCATTTCCTTCGTTCT
GTCGTCACCGGCGCTGCTGCCACTACCACCGCTGCTCTATCCAAATCTCACCCTTTGATT
TCAGTTTTCCGCCACCAGTCTCGGCCCTTAGTATTTCCCCATTTCAATACCAACCAAACT
GTTTTCACCCTCAGATCCTTCTCCACACTCTCCCGGCCCGCACGATCCCACCGTTCAGCT
CGGCCTGATATCGCAGCCAAAGCCCGGCAACTCCAAACCCGCCGTCTGTGGACCTATGCC
ATTACCTTCAGCTGCATAGCAGGTTTCATAGTAATAGTCCTTAACCAATTCCAAGACCAA
CTTGTATTCTATTTAACCCCTACAGATGCTCTAGCAAAACATGCTGAGAACCCTACAAGA
TCCAAATTTCGACTTGGTGGATTAGTGCTAGAAAATAGTGTAACACCAATACCCAATTCC
CCAGAAATGGAATTTGTGATTACTGATTTGATTACTGATATTTTGGTTAAGTATGACGGG
TCGTTACCGGATCTTTTTCGGGAAGGGCATTCCGTTGTAGTAGAAGGGTTTATAAAGCCA
TTTACTGAAGAGATGAAGAAGAAAGAGAATGAAATCTTGAGTGAGAAAAAGTTACAGGTA
ACTGAGAAGGCGAGAAGTGGGGATTGTTATTTTGGAGCTACTGAAGTGTTGGCTAAACAC
GATGAGAAGTATATGCCTCCTGAAGTTGCAGCTGCACTTGAGAAGAATAAGCAGTTGCTT
AGTCAGATGGAAGGGAATGCGGAAGAGGGTGATGATGCAGCACCTCCAGCTACAGCGAGG
GCGTAA