Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061436
CDS Infomation

pacid=37457827 polypeptide=PGSC0003DMP400041334 locus=PGSC0003DMG400023910 ID=PGSC0003DMT400061436.v4.03 annot-version=v4.03
Sequence

ATGCCGAGAAAAGGAATGAAAACTCTGAATTGGTTTTCTCCAAAACACAGTTCAGCAACT
GATATGAATTCTCCATCTACTTCACCATTCTCTTCTCCTTCCCGTTTCGCCTTTTCGCCA
TCCAGGCCGAGTTTTTCTGAAGCAGTGATTGATCGGACGATCGAGATGGCTGAGCAGATG
ATCACGAAATGGGATCCTGATACTACTACCTTCGCTAAGGTGACTTCTGTGTTCTATGAG
AACAGAAAAGAAGCTAAGGATTTCATCAAATATGTGAATAATTTACATAAGGCGATGCAT
TTTCATGCTAGTGAGAATTCCAGATCCGATAAGCTTGTTCGTGCTCAATCATTGATGCAA
ATCGCGATGAAACGACTGCAGAAGGAGTTTTATCAGATTCTATCAATTAACAGAGCACTT
TTGGATCCTGAATCTATATCCACTGTGTCTTCACGTACTTCGATAAGTACTCGATCGAGT
ACCTCTGAGTTCAACATTGAGGATGATGATATTGATAATCGTGTTGCAATTGCTGGTGAA
TCTATTTCTGAAGTTGAGGATATTTCTAATATTGTAATGGCGGATTTGAGATTGATTGCA
GAGTGTATGATTTCTTCTGGATATACGAAAGAGTGCTTGCAGATTTACAAAGTTATACGA
AAATCGATTATCGATGAAGGGATTTATAGACTCGGTGTTGAGAAATTGAGTTCTTCGCAA
GTTCATAAAATGGATTGGGAAGTTATGGATCTGAAGATTAAGGATTGGCTTAATGCAGTG
AATGTAGCTATGAAAACATTGTTCGACGGTGAGAGGATTCTCTGCGATCACGTTTTTGCT
TCCAGTGATGCAATTAGAGAATCGTGTTTTACTGAAATTTCAAAAGATGGAGCTATGATT
CTGTTTAGCTTCCCGGAAATTGTGGCGAAAAACAGTAAGAAGTCGCCGGAAAAAGTGTTC
CGTATGCTCGATATGTACACTTCAATCGTCGAACACTGGACGGAGATTGAAACTACATTT
TCCTTCGATTCAGAATCTGCTATCCGATCTCAAGCTATGACGTCTCTCGTTAAGCTTGGC
GAGTCTATAAGGATGGCTTTGGCTGAATTTGATACTGCTCTTCAAAAGGAATCGTCAAAG
ACGACGGTTGCCGGCGGTGGAATCCATCCTCTCACCATTGACGCAATGAATTACATCATT
CTACTTGCCGATTACAGCTACGTACTCTCTGACATCCTTGGCGACTCTCCTCCTCCGGCT
AAAAGTTCATTGCCTGAATCATATTTCGGTATGGCTGATTCCGATGAGTCTCCAGCACCG
GTAATCTCACTCCGATTTGCTTGGTTGATTCTCATTCTTCTCTGCAAACTCGACGGCAAA
GCAAAGCACTACAAAGACGTTTCCCTCGCGTACCTCTTCTTAGCCAACAATCTCCGGTAC
ATCGTCGTAAAAGTCCGTTCATCGAATCTCAAGTACTTGCTAGGTGAAAATTGGATATCA
AAACAAGAGGGAAAAATCAAAAAGTTTGCCTCCAATTATGAACAGCTAGGATGGAGCCAC
GTCATCCAATCTCTCCCGCGAGAACCAAACTCCTCGATCTCTCCCCAACAAGTGAAAGAG
ATATTCAAGAGATTCAATTCATCATTCGAGCAAGCTCATCGGAAGCAATCTCTCTACGTC
GTACCAAATAGTAAGCTCCGAGATGATTTGAAAGTGTCGATTGCAAGGAAAATACTTCCT
GTGTATAGAGAGTTTTACAATATACATAGAGATACGATAGCAAAAGAGAGACATTCGAGT
CATGTGATCAAATATTCTCCGGAAGATTTAGCACATTATTTGTCCGATTTATTTTTCGGA
CCGATTGAATCGGGAAGTTCATCGTCAGTTGAGTCATCCCCATCACGTACAATACCATCA
CAATTGCAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400041334
PEP Infomation

pacid=37457827 transcript=PGSC0003DMT400061436 locus=PGSC0003DMG400023910 ID=PGSC0003DMT400061436.v4.03 annot-version=v4.03
Sequence

MPRKGMKTLNWFSPKHSSATDMNSPSTSPFSSPSRFAFSPSRPSFSEAVIDRTIEMAEQM
ITKWDPDTTTFAKVTSVFYENRKEAKDFIKYVNNLHKAMHFHASENSRSDKLVRAQSLMQ
IAMKRLQKEFYQILSINRALLDPESISTVSSRTSISTRSSTSEFNIEDDDIDNRVAIAGE
SISEVEDISNIVMADLRLIAECMISSGYTKECLQIYKVIRKSIIDEGIYRLGVEKLSSSQ
VHKMDWEVMDLKIKDWLNAVNVAMKTLFDGERILCDHVFASSDAIRESCFTEISKDGAMI
LFSFPEIVAKNSKKSPEKVFRMLDMYTSIVEHWTEIETTFSFDSESAIRSQAMTSLVKLG
ESIRMALAEFDTALQKESSKTTVAGGGIHPLTIDAMNYIILLADYSYVLSDILGDSPPPA
KSSLPESYFGMADSDESPAPVISLRFAWLILILLCKLDGKAKHYKDVSLAYLFLANNLRY
IVVKVRSSNLKYLLGENWISKQEGKIKKFASNYEQLGWSHVIQSLPREPNSSISPQQVKE
IFKRFNSSFEQAHRKQSLYVVPNSKLRDDLKVSIARKILPVYREFYNIHRDTIAKERHSS
HVIKYSPEDLAHYLSDLFFGPIESGSSSSVESSPSRTIPSQLQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400061436
Transcript Infomation

pacid=37457827 locus=PGSC0003DMG400023910 ID=PGSC0003DMT400061436.v4.03 annot-version=v4.03
Sequence

ATGCCGAGAAAAGGAATGAAAACTCTGAATTGGTTTTCTCCAAAACACAGTTCAGCAACT
GATATGAATTCTCCATCTACTTCACCATTCTCTTCTCCTTCCCGTTTCGCCTTTTCGCCA
TCCAGGCCGAGTTTTTCTGAAGCAGTGATTGATCGGACGATCGAGATGGCTGAGCAGATG
ATCACGAAATGGGATCCTGATACTACTACCTTCGCTAAGGTGACTTCTGTGTTCTATGAG
AACAGAAAAGAAGCTAAGGATTTCATCAAATATGTGAATAATTTACATAAGGCGATGCAT
TTTCATGCTAGTGAGAATTCCAGATCCGATAAGCTTGTTCGTGCTCAATCATTGATGCAA
ATCGCGATGAAACGACTGCAGAAGGAGTTTTATCAGATTCTATCAATTAACAGAGCACTT
TTGGATCCTGAATCTATATCCACTGTGTCTTCACGTACTTCGATAAGTACTCGATCGAGT
ACCTCTGAGTTCAACATTGAGGATGATGATATTGATAATCGTGTTGCAATTGCTGGTGAA
TCTATTTCTGAAGTTGAGGATATTTCTAATATTGTAATGGCGGATTTGAGATTGATTGCA
GAGTGTATGATTTCTTCTGGATATACGAAAGAGTGCTTGCAGATTTACAAAGTTATACGA
AAATCGATTATCGATGAAGGGATTTATAGACTCGGTGTTGAGAAATTGAGTTCTTCGCAA
GTTCATAAAATGGATTGGGAAGTTATGGATCTGAAGATTAAGGATTGGCTTAATGCAGTG
AATGTAGCTATGAAAACATTGTTCGACGGTGAGAGGATTCTCTGCGATCACGTTTTTGCT
TCCAGTGATGCAATTAGAGAATCGTGTTTTACTGAAATTTCAAAAGATGGAGCTATGATT
CTGTTTAGCTTCCCGGAAATTGTGGCGAAAAACAGTAAGAAGTCGCCGGAAAAAGTGTTC
CGTATGCTCGATATGTACACTTCAATCGTCGAACACTGGACGGAGATTGAAACTACATTT
TCCTTCGATTCAGAATCTGCTATCCGATCTCAAGCTATGACGTCTCTCGTTAAGCTTGGC
GAGTCTATAAGGATGGCTTTGGCTGAATTTGATACTGCTCTTCAAAAGGAATCGTCAAAG
ACGACGGTTGCCGGCGGTGGAATCCATCCTCTCACCATTGACGCAATGAATTACATCATT
CTACTTGCCGATTACAGCTACGTACTCTCTGACATCCTTGGCGACTCTCCTCCTCCGGCT
AAAAGTTCATTGCCTGAATCATATTTCGGTATGGCTGATTCCGATGAGTCTCCAGCACCG
GTAATCTCACTCCGATTTGCTTGGTTGATTCTCATTCTTCTCTGCAAACTCGACGGCAAA
GCAAAGCACTACAAAGACGTTTCCCTCGCGTACCTCTTCTTAGCCAACAATCTCCGGTAC
ATCGTCGTAAAAGTCCGTTCATCGAATCTCAAGTACTTGCTAGGTGAAAATTGGATATCA
AAACAAGAGGGAAAAATCAAAAAGTTTGCCTCCAATTATGAACAGCTAGGATGGAGCCAC
GTCATCCAATCTCTCCCGCGAGAACCAAACTCCTCGATCTCTCCCCAACAAGTGAAAGAG
ATATTCAAGAGATTCAATTCATCATTCGAGCAAGCTCATCGGAAGCAATCTCTCTACGTC
GTACCAAATAGTAAGCTCCGAGATGATTTGAAAGTGTCGATTGCAAGGAAAATACTTCCT
GTGTATAGAGAGTTTTACAATATACATAGAGATACGATAGCAAAAGAGAGACATTCGAGT
CATGTGATCAAATATTCTCCGGAAGATTTAGCACATTATTTGTCCGATTTATTTTTCGGA
CCGATTGAATCGGGAAGTTCATCGTCAGTTGAGTCATCCCCATCACGTACAATACCATCA
CAATTGCAGTGA