Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061432
CDS Infomation

pacid=37458408 polypeptide=PGSC0003DMP400041331 locus=PGSC0003DMG400023907 ID=PGSC0003DMT400061432.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAAGTCGTCACAGGAAGTCTAGGAGTGCTTCCGGAATTATGGAAGGAAGCAAA
CTAGGTAAAAAACAAGTTGCTACACCAAAGGTGACTCTCAATTCTCGTTCCTACTGTGAT
GAAACTACTAGGGGAGATATGATTATGCATGATTTAGGGAAGATCTCTTCCAAACGAGTT
ACTGGAACACCAATTAAGAACTTGCTTGCAGAAGAAATGGCGAAAGAAGGCGAATCAAAG
AAAAGGCCGACCAGCATTGTTGCCAGATTGATGGGTCTTGAAGGGATGCCATCTCCGCAG
CATATTGGTAGACAACAGAGAAGGTTTTCAGACAGCTGCCAACATAGAAATGAACAGATA
GATTCAAGAAGGAGGAAGCAACTATTCGATGAACAATCAAGTAAAAGAAGCTCCATGGAG
CACCAAGAATTCAAGGATGTGTATGAGGATTTGGAAGCATCACATGTTGGCAACCGTCGC
CATTCATCAAGATGGAATGAAACCGGAAGATTTGCGACTCCTGATATGGCACTTATACAG
CAGAAGTTTATGGATGCAAAACGTCTTTCAACTGATGAAAGGTTTCAGAACTCAAAAGAA
TTTAATGACACTCTTGAGGCGCTTGATTCAAATAAGGAATTATTGTTGAAGTATCTTCAG
GAACCAGATTCCTTGTTTGTGAAGCACTTGCAGGATCTGCAAGTTGAGAGTGCTAGTTCT
ACGTGCAGTCGCATAGCAGTTTTGAAGCCATCAAATTCTGTGAAATATGAAGGCAGTGCC
AAATCCTCCAAATCTGTTAGAGGCGGTTCATGTAAACAAAGCATCAGCTTGCAGAAAGAG
CGCCTTGATGGTCTCTTACTCCAGTCACAGCATCGCCATAGTGGACATAATTCCCAAAAG
TCCTCACCGGTTCTTTCTGAAGGGAAGGAGGAAAACATTCTACCAACAAGAATTGTTGTT
CTGAAGCCAAACCTTGGGATAACACAAAGTAATATTGCTTCTGTTCCACATCACCCTGAC
GTGAGGAAGCATGCACAATATCATCGTGCTTCACCTGGGGGAGCAGGAGAAGAGGAAGAG
AAAAATTCATCCAAGAATATGGGGATCTCAAGGCCCAAGTCAAATGAGGCAAGAGATATT
GCAAAGGAAATTACGAGACGGATGCGAGACTCTTTTGGGCCTTTTGATGGCAGGGATGCA
TATTTTAGAGGTTCTGGTGTTAAAGGATATGCTGGAGATGAAAGTTCTTGTGATGTTTAT
GAAAGTGATTCTACCGGTGACTCAGACATTACAACTTTGTCTTGTAGGAAGTCATCTGGT
AGGGGTAATCTGAAAAAATCTTCATCCCTAGGTTCTGAATCATCAGTGGGTAGGGAGGCA
AAGAAGAGGCTGTCTGAGAGGTGGAAGATGACTCAATATTATCAAGACATAGAAATGGCT
GGTAAGAGTAGTACACTTGGTGAAATGCTTTCGTTACCTGATGGGCGAATGAAACATGAT
TATTGTGATACCATGGTGCATGTTGAAGAAGCGACTAACGAACCTGGTGGCAGGAAAGGA
ACTACTGAATGGGATTTTCCCTTGGGTATTAGTAGCAGGGATGGTTGGAAGGATGTATGT
ATTAATGATTCATCAGGATACAGATCAACTTCTCCACCTTTTTGCAGCAAAAAGCATAGA
ACCAGAGCACGTCGGGAAGTTTTTTCTAATAAGCAATGCTCAATTTCCAAAGAGCCTGTA
AATCGGGAACAGTCCGTAAATCATCACAGAAGTAGGTCATTGGATGGTATGGTGAATTTT
AGAGATGAATTCTTATCCAAAGACTCTAGATCCAGCAAAAAGAAACTGCATTCCTATCGA
CTTGGTAGCGACTCCTTGTCAAAAGGCAAGCTATGCCAAAGAATTGATATGAACCTAAAA
GAGGACCTATCTGAGAAGCGGTCTTTAGCTTCTCAAGTGGCTTCTGCAGATGGCTTGAGT
TATACTAATGCTTCAGATGATGCTGAAACCGAGAGTATTACCTTATCTTCAGAATATTCT
GTTGAGATGCATCGGAAGCTACCTGTGGAATGTGGCAGTGCTTCTCCTATTAACCAAGAG
GTCTCAATTCTACAGGAAGCACTTCCAGAACCATCACCACCATCATCTGCAGCTGCTTCT
GTTGTTTTGGAGTATCCTGCACCTGAACCTGAATCATCAGTAAGCTCCAAGGAGGCTGAT
CATCGTAGTCCACTTTCTGTTTTGGAGTATCCTGCACCTGAACCTGAATCATCAGTAAGC
TCCAAGGAGGCTGATCATCCTAGTCCACCTTCTGTTTTGGAGGTTCCTTTTACAGAAGAT
GTGTCTTCCGGTTCAGAATGCTTTGAGAGAGTCAGTGCTGAACTTAATGGGCTTCGGATG
CAACTAAAGCTCCTCAAGATGGAATCAGAGCCTTATGCTGATGTAATACTAAGTGATGAC
GAGGTTGAGTACTTTGAAGACAATTGTAGTTTAAGGTCCCAAAGCTGGCAATCTTCTTAC
ATAATGGATGTGCTAACCGACTCTGGGTTGAAAGCATCCGACCCTGATACATTCGTAACA
TCTTTCCACACTTTGGAGTGTCCTTTGAGTCCCTGGATTTTCGACAATCTTGAGAAGAAG
TACACTGATGAAACAACTGGACCGAGATACGAAAGGAGGCTACTGTTTAACCGTATAAAC
CTGGGTCTACTGGATATTGTTAGGAAGTATGTGGATCCCTGCCCTTGGGTGAAGCCAATA
GAAGGTATTGACTGGAAATGGGAGACTTATGGGATGAAAAACATTCTGCATCAACTGCTG
AGAAGCCACGAAGATCCTGCAAACGCAGACACACCTGGTAACGTTGTGGAAGAGATGCAG
TGGCTAGCACTCAAGGATGACATGGATGTGACAGTTAAGGACATTGAGGAATTGTTGATA
GAGGACCTCATAGAAGAAGTTGTAGGTGCAATCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400041331
PEP Infomation

pacid=37458408 transcript=PGSC0003DMT400061432 locus=PGSC0003DMG400023907 ID=PGSC0003DMT400061432.v4.03 annot-version=v4.03
Sequence

MEKSRHRKSRSASGIMEGSKLGKKQVATPKVTLNSRSYCDETTRGDMIMHDLGKISSKRV
TGTPIKNLLAEEMAKEGESKKRPTSIVARLMGLEGMPSPQHIGRQQRRFSDSCQHRNEQI
DSRRRKQLFDEQSSKRSSMEHQEFKDVYEDLEASHVGNRRHSSRWNETGRFATPDMALIQ
QKFMDAKRLSTDERFQNSKEFNDTLEALDSNKELLLKYLQEPDSLFVKHLQDLQVESASS
TCSRIAVLKPSNSVKYEGSAKSSKSVRGGSCKQSISLQKERLDGLLLQSQHRHSGHNSQK
SSPVLSEGKEENILPTRIVVLKPNLGITQSNIASVPHHPDVRKHAQYHRASPGGAGEEEE
KNSSKNMGISRPKSNEARDIAKEITRRMRDSFGPFDGRDAYFRGSGVKGYAGDESSCDVY
ESDSTGDSDITTLSCRKSSGRGNLKKSSSLGSESSVGREAKKRLSERWKMTQYYQDIEMA
GKSSTLGEMLSLPDGRMKHDYCDTMVHVEEATNEPGGRKGTTEWDFPLGISSRDGWKDVC
INDSSGYRSTSPPFCSKKHRTRARREVFSNKQCSISKEPVNREQSVNHHRSRSLDGMVNF
RDEFLSKDSRSSKKKLHSYRLGSDSLSKGKLCQRIDMNLKEDLSEKRSLASQVASADGLS
YTNASDDAETESITLSSEYSVEMHRKLPVECGSASPINQEVSILQEALPEPSPPSSAAAS
VVLEYPAPEPESSVSSKEADHRSPLSVLEYPAPEPESSVSSKEADHPSPPSVLEVPFTED
VSSGSECFERVSAELNGLRMQLKLLKMESEPYADVILSDDEVEYFEDNCSLRSQSWQSSY
IMDVLTDSGLKASDPDTFVTSFHTLECPLSPWIFDNLEKKYTDETTGPRYERRLLFNRIN
LGLLDIVRKYVDPCPWVKPIEGIDWKWETYGMKNILHQLLRSHEDPANADTPGNVVEEMQ
WLALKDDMDVTVKDIEELLIEDLIEEVVGAI*

Transcript Sequence

Transcript ID

PGSC0003DMT400061432
Transcript Infomation

pacid=37458408 locus=PGSC0003DMG400023907 ID=PGSC0003DMT400061432.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAAGTCGTCACAGGAAGTCTAGGAGTGCTTCCGGAATTATGGAAGGAAGCAAA
CTAGGTAAAAAACAAGTTGCTACACCAAAGGTGACTCTCAATTCTCGTTCCTACTGTGAT
GAAACTACTAGGGGAGATATGATTATGCATGATTTAGGGAAGATCTCTTCCAAACGAGTT
ACTGGAACACCAATTAAGAACTTGCTTGCAGAAGAAATGGCGAAAGAAGGCGAATCAAAG
AAAAGGCCGACCAGCATTGTTGCCAGATTGATGGGTCTTGAAGGGATGCCATCTCCGCAG
CATATTGGTAGACAACAGAGAAGGTTTTCAGACAGCTGCCAACATAGAAATGAACAGATA
GATTCAAGAAGGAGGAAGCAACTATTCGATGAACAATCAAGTAAAAGAAGCTCCATGGAG
CACCAAGAATTCAAGGATGTGTATGAGGATTTGGAAGCATCACATGTTGGCAACCGTCGC
CATTCATCAAGATGGAATGAAACCGGAAGATTTGCGACTCCTGATATGGCACTTATACAG
CAGAAGTTTATGGATGCAAAACGTCTTTCAACTGATGAAAGGTTTCAGAACTCAAAAGAA
TTTAATGACACTCTTGAGGCGCTTGATTCAAATAAGGAATTATTGTTGAAGTATCTTCAG
GAACCAGATTCCTTGTTTGTGAAGCACTTGCAGGATCTGCAAGTTGAGAGTGCTAGTTCT
ACGTGCAGTCGCATAGCAGTTTTGAAGCCATCAAATTCTGTGAAATATGAAGGCAGTGCC
AAATCCTCCAAATCTGTTAGAGGCGGTTCATGTAAACAAAGCATCAGCTTGCAGAAAGAG
CGCCTTGATGGTCTCTTACTCCAGTCACAGCATCGCCATAGTGGACATAATTCCCAAAAG
TCCTCACCGGTTCTTTCTGAAGGGAAGGAGGAAAACATTCTACCAACAAGAATTGTTGTT
CTGAAGCCAAACCTTGGGATAACACAAAGTAATATTGCTTCTGTTCCACATCACCCTGAC
GTGAGGAAGCATGCACAATATCATCGTGCTTCACCTGGGGGAGCAGGAGAAGAGGAAGAG
AAAAATTCATCCAAGAATATGGGGATCTCAAGGCCCAAGTCAAATGAGGCAAGAGATATT
GCAAAGGAAATTACGAGACGGATGCGAGACTCTTTTGGGCCTTTTGATGGCAGGGATGCA
TATTTTAGAGGTTCTGGTGTTAAAGGATATGCTGGAGATGAAAGTTCTTGTGATGTTTAT
GAAAGTGATTCTACCGGTGACTCAGACATTACAACTTTGTCTTGTAGGAAGTCATCTGGT
AGGGGTAATCTGAAAAAATCTTCATCCCTAGGTTCTGAATCATCAGTGGGTAGGGAGGCA
AAGAAGAGGCTGTCTGAGAGGTGGAAGATGACTCAATATTATCAAGACATAGAAATGGCT
GGTAAGAGTAGTACACTTGGTGAAATGCTTTCGTTACCTGATGGGCGAATGAAACATGAT
TATTGTGATACCATGGTGCATGTTGAAGAAGCGACTAACGAACCTGGTGGCAGGAAAGGA
ACTACTGAATGGGATTTTCCCTTGGGTATTAGTAGCAGGGATGGTTGGAAGGATGTATGT
ATTAATGATTCATCAGGATACAGATCAACTTCTCCACCTTTTTGCAGCAAAAAGCATAGA
ACCAGAGCACGTCGGGAAGTTTTTTCTAATAAGCAATGCTCAATTTCCAAAGAGCCTGTA
AATCGGGAACAGTCCGTAAATCATCACAGAAGTAGGTCATTGGATGGTATGGTGAATTTT
AGAGATGAATTCTTATCCAAAGACTCTAGATCCAGCAAAAAGAAACTGCATTCCTATCGA
CTTGGTAGCGACTCCTTGTCAAAAGGCAAGCTATGCCAAAGAATTGATATGAACCTAAAA
GAGGACCTATCTGAGAAGCGGTCTTTAGCTTCTCAAGTGGCTTCTGCAGATGGCTTGAGT
TATACTAATGCTTCAGATGATGCTGAAACCGAGAGTATTACCTTATCTTCAGAATATTCT
GTTGAGATGCATCGGAAGCTACCTGTGGAATGTGGCAGTGCTTCTCCTATTAACCAAGAG
GTCTCAATTCTACAGGAAGCACTTCCAGAACCATCACCACCATCATCTGCAGCTGCTTCT
GTTGTTTTGGAGTATCCTGCACCTGAACCTGAATCATCAGTAAGCTCCAAGGAGGCTGAT
CATCGTAGTCCACTTTCTGTTTTGGAGTATCCTGCACCTGAACCTGAATCATCAGTAAGC
TCCAAGGAGGCTGATCATCCTAGTCCACCTTCTGTTTTGGAGGTTCCTTTTACAGAAGAT
GTGTCTTCCGGTTCAGAATGCTTTGAGAGAGTCAGTGCTGAACTTAATGGGCTTCGGATG
CAACTAAAGCTCCTCAAGATGGAATCAGAGCCTTATGCTGATGTAATACTAAGTGATGAC
GAGGTTGAGTACTTTGAAGACAATTGTAGTTTAAGGTCCCAAAGCTGGCAATCTTCTTAC
ATAATGGATGTGCTAACCGACTCTGGGTTGAAAGCATCCGACCCTGATACATTCGTAACA
TCTTTCCACACTTTGGAGTGTCCTTTGAGTCCCTGGATTTTCGACAATCTTGAGAAGAAG
TACACTGATGAAACAACTGGACCGAGATACGAAAGGAGGCTACTGTTTAACCGTATAAAC
CTGGGTCTACTGGATATTGTTAGGAAGTATGTGGATCCCTGCCCTTGGGTGAAGCCAATA
GAAGGTATTGACTGGAAATGGGAGACTTATGGGATGAAAAACATTCTGCATCAACTGCTG
AGAAGCCACGAAGATCCTGCAAACGCAGACACACCTGGTAACGTTGTGGAAGAGATGCAG
TGGCTAGCACTCAAGGATGACATGGATGTGACAGTTAAGGACATTGAGGAATTGTTGATA
GAGGACCTCATAGAAGAAGTTGTAGGTGCAATCTAG