Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061415
CDS Infomation

pacid=37427711 polypeptide=PGSC0003DMP400041319 locus=PGSC0003DMG402023899 ID=PGSC0003DMT400061415.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTAAAAACCCTAATTCCTCTTCAATGTATCCTCAACTACTAATTGACCAAAAT
ACCCCTTTCCCCTCTTCAACCTCTCGCCAAAACCTTTACCCAATTATTGACATGAACGAC
CTTGTAGAAAATCTCTTCCCTCAAAATGATCAAACTGCCCCTGAAGAACAGCATTATTCA
CCATATGCCCCTCCTGAAATCCTTGAAGAAACCCTTCTCGTTATCCCCGGTTCCATTCTT
CACTTGATTGACAAGCACTATTCCATTGAACTCGCCACTGGCGATTTATTTCTACATCGT
CTCCGACAAGGGAACAATATCGTCGCTCTACTTGTTAGTGTTGGAAATGAAATCCAGTGG
CTGTTGACTAAGGACCTTACCGCGGTAAAGCTCGATGATTCGCATTACTTTTTCTCATTT
CAAGCTCCCAAAGACGATGAATCGGATACAGAATCAGTCGGTGATTCGTTGAATTATGGT
TTGACGATTGCTTCCAAGGGACAGGAGAAATTATTGAAGGAGCTGGATGGTATTTTGGAA
AATTACAGCAATTTTGCGGTGCAGAAAGTGGAAGAAAAGGCCGCGGTGGGATTGGGTGGA
CCGGTGGCGAAGGAGTTGTCACTGGCGGATTTAAAGTCGGAGAAGAAGAAGGAGGTGTTG
GAAGAGCGATGTGCAGCGTATTGGACGACATTGGCGCCCAATGTGGAGGAGTACAATGCC
AAGGCAGCAAAATTAGTTGCTTCAGGTTCAGGACACTTAATAAAGGGGATTTTGTGGTGC
GGAGATGTTACTGCAGATGGATTGAAGAGGGGGAATGAGGTTCTGAAGAATAGGTTTAAG
ACAGGTTCGAAGACTAAGGTCAGTCCTGAGACGTTGAAGAGGATCAAACGGTATGACCTT
TCTAGGATTTGGTGGACTTTTGCTTTTTCTTGCTTGGCTGGCTTGATGATTAGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400041319
PEP Infomation

pacid=37427711 transcript=PGSC0003DMT400061415 locus=PGSC0003DMG402023899 ID=PGSC0003DMT400061415.v4.03 annot-version=v4.03
Sequence

MASKNPNSSSMYPQLLIDQNTPFPSSTSRQNLYPIIDMNDLVENLFPQNDQTAPEEQHYS
PYAPPEILEETLLVIPGSILHLIDKHYSIELATGDLFLHRLRQGNNIVALLVSVGNEIQW
LLTKDLTAVKLDDSHYFFSFQAPKDDESDTESVGDSLNYGLTIASKGQEKLLKELDGILE
NYSNFAVQKVEEKAAVGLGGPVAKELSLADLKSEKKKEVLEERCAAYWTTLAPNVEEYNA
KAAKLVASGSGHLIKGILWCGDVTADGLKRGNEVLKNRFKTGSKTKVSPETLKRIKRYDL
SRIWWTFAFSCLAGLMIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400061415
Transcript Infomation

pacid=37427711 locus=PGSC0003DMG402023899 ID=PGSC0003DMT400061415.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTAAAAACCCTAATTCCTCTTCAATGTATCCTCAACTACTAATTGACCAAAAT
ACCCCTTTCCCCTCTTCAACCTCTCGCCAAAACCTTTACCCAATTATTGACATGAACGAC
CTTGTAGAAAATCTCTTCCCTCAAAATGATCAAACTGCCCCTGAAGAACAGCATTATTCA
CCATATGCCCCTCCTGAAATCCTTGAAGAAACCCTTCTCGTTATCCCCGGTTCCATTCTT
CACTTGATTGACAAGCACTATTCCATTGAACTCGCCACTGGCGATTTATTTCTACATCGT
CTCCGACAAGGGAACAATATCGTCGCTCTACTTGTTAGTGTTGGAAATGAAATCCAGTGG
CTGTTGACTAAGGACCTTACCGCGGTAAAGCTCGATGATTCGCATTACTTTTTCTCATTT
CAAGCTCCCAAAGACGATGAATCGGATACAGAATCAGTCGGTGATTCGTTGAATTATGGT
TTGACGATTGCTTCCAAGGGACAGGAGAAATTATTGAAGGAGCTGGATGGTATTTTGGAA
AATTACAGCAATTTTGCGGTGCAGAAAGTGGAAGAAAAGGCCGCGGTGGGATTGGGTGGA
CCGGTGGCGAAGGAGTTGTCACTGGCGGATTTAAAGTCGGAGAAGAAGAAGGAGGTGTTG
GAAGAGCGATGTGCAGCGTATTGGACGACATTGGCGCCCAATGTGGAGGAGTACAATGCC
AAGGCAGCAAAATTAGTTGCTTCAGGTTCAGGACACTTAATAAAGGGGATTTTGTGGTGC
GGAGATGTTACTGCAGATGGATTGAAGAGGGGGAATGAGGTTCTGAAGAATAGGTTTAAG
ACAGGTTCGAAGACTAAGGTCAGTCCTGAGACGTTGAAGAGGATCAAACGGTATGACCTT
TCTAGGATTTGGTGGACTTTTGCTTTTTCTTGCTTGGCTGGCTTGATGATTAGCTAA