Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061190
CDS Infomation

pacid=37449694 polypeptide=PGSC0003DMP400041203 locus=PGSC0003DMG400023819 ID=PGSC0003DMT400061190.v4.03 annot-version=v4.03
Sequence

ATGGACGCCATCAATCTCTTTCTCTATCTTTTTCTCTCTGTTTTCACCTTTTATCTCGTC
CGGGGTATGGCGGTGGCTCATCTTCGCCGGCGTAAAAATCGACTCCCGCCGGGAACCCTT
GGCCTGCCCTTTATCGGAGAAACCCTCCAGTTAATTTCTGCCTACAAGACGGAAAATCCT
GAACCCTTCATCGATGACCGGGTTTCTAAATACGGCAACATTTTCACCACCCATGTTTTT
GGTGAACCGACGGTTTTCTCCGCTGACCCGGAAACGAACCGGTTTATTTTGCAGAATGAA
GGCCGGCTTTTTGAGTCCAGCTATCCCGGTTCGATACAGAATTTGCTTGGGAGGTACTCT
CTGTTGCTTATGAGAGGAACTCTACACAAAAGAATGCATTCATTAACTATGAGTTTTGCT
AATTCTTCCATCCTTAAAGACCATCTGTTGGCCGATATAGATCGGTTGGTTAGGCTTAAT
TTGGATTCCTGGACCGGCCGGGTTTTCCTTATGGACGAGGCTAAAAAGATAACGTTTAAT
CTAACAGTGAAGCAGCTGATGAGTTTTGATCCATGTGAGTGGACTGAAAATCTGATGAAA
GAGTATATGCTTGTTATTGAAGGTTTCTTCAGTATTCCTTTGCCTATTTTCTCATCCACC
TACCGCAAGGCCATTCAAGCGAGAACTAAAGTAGCGGAGGCGTTGGGATTAGTAGTGAGA
GATAGGAGGAAAGAGAGAGAAGGAGGAGAGAGAAAGAATGATATGTTGGAGTCGTTGTTT
GAAGGAGATGGCGCCGCCGGAGTTGAAGGAGGAGGATTTTCCGATGAGGAAATTGTTGAT
TTTATACTGGCGTTGCTTGTTGCTGGCTATGAAACCACCTCTACCATCATGACCCTTGCT
GTCAAATTCCTCACTGAGACACCCCATGCTCTCTCACAACTTAAGGAAGAGCACGAGGAG
ATCAGGTTAAGAAAAGGTGAAGTTGAATCTTTACAATGGGAAGATTACAAGTCAATGCCC
TTCACTCAATGTGTTGTTAATGAAACTCTGCGAATCGCTAACATAATTAGCGGAGTGTTC
AGGAGAGCCATGACTGACATAAATATCAAAGGTTATACCATTCCCAAAGGTTGGAAGGTT
TTTGCTTCTTTCCGAGCTGTTCATCTAGACCATGAACATTTCAAAGATGCGCGTACATTT
GATCCATGGAGGTGGCAGAGTAGTGCAGGACCGACAAGCTCACCTAACGTATTCACACCA
TTTGGTGGGGGACCTCGTCGCTGTCCTGGTTACGAGCTTGCTAGAGTGGAACTCTCTGTT
TTCCTACACCACTTGGTGACTCGTTTTAGTTGGGTTCCGGCTGAGGCAGATAAGTTAATT
TTCTTCCCAACGACAAGGATGCAGAAGCGATATCCAATTAACGTCCAACATCGAAGCTTG
TTTGAGCAGAGAGAAGAAGAGAGTGGTTTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400041203
PEP Infomation

pacid=37449694 transcript=PGSC0003DMT400061190 locus=PGSC0003DMG400023819 ID=PGSC0003DMT400061190.v4.03 annot-version=v4.03
Sequence

MDAINLFLYLFLSVFTFYLVRGMAVAHLRRRKNRLPPGTLGLPFIGETLQLISAYKTENP
EPFIDDRVSKYGNIFTTHVFGEPTVFSADPETNRFILQNEGRLFESSYPGSIQNLLGRYS
LLLMRGTLHKRMHSLTMSFANSSILKDHLLADIDRLVRLNLDSWTGRVFLMDEAKKITFN
LTVKQLMSFDPCEWTENLMKEYMLVIEGFFSIPLPIFSSTYRKAIQARTKVAEALGLVVR
DRRKEREGGERKNDMLESLFEGDGAAGVEGGGFSDEEIVDFILALLVAGYETTSTIMTLA
VKFLTETPHALSQLKEEHEEIRLRKGEVESLQWEDYKSMPFTQCVVNETLRIANIISGVF
RRAMTDINIKGYTIPKGWKVFASFRAVHLDHEHFKDARTFDPWRWQSSAGPTSSPNVFTP
FGGGPRRCPGYELARVELSVFLHHLVTRFSWVPAEADKLIFFPTTRMQKRYPINVQHRSL
FEQREEESGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400061190
Transcript Infomation

pacid=37449694 locus=PGSC0003DMG400023819 ID=PGSC0003DMT400061190.v4.03 annot-version=v4.03
Sequence

ATGGACGCCATCAATCTCTTTCTCTATCTTTTTCTCTCTGTTTTCACCTTTTATCTCGTC
CGGGGTATGGCGGTGGCTCATCTTCGCCGGCGTAAAAATCGACTCCCGCCGGGAACCCTT
GGCCTGCCCTTTATCGGAGAAACCCTCCAGTTAATTTCTGCCTACAAGACGGAAAATCCT
GAACCCTTCATCGATGACCGGGTTTCTAAATACGGCAACATTTTCACCACCCATGTTTTT
GGTGAACCGACGGTTTTCTCCGCTGACCCGGAAACGAACCGGTTTATTTTGCAGAATGAA
GGCCGGCTTTTTGAGTCCAGCTATCCCGGTTCGATACAGAATTTGCTTGGGAGGTACTCT
CTGTTGCTTATGAGAGGAACTCTACACAAAAGAATGCATTCATTAACTATGAGTTTTGCT
AATTCTTCCATCCTTAAAGACCATCTGTTGGCCGATATAGATCGGTTGGTTAGGCTTAAT
TTGGATTCCTGGACCGGCCGGGTTTTCCTTATGGACGAGGCTAAAAAGATAACGTTTAAT
CTAACAGTGAAGCAGCTGATGAGTTTTGATCCATGTGAGTGGACTGAAAATCTGATGAAA
GAGTATATGCTTGTTATTGAAGGTTTCTTCAGTATTCCTTTGCCTATTTTCTCATCCACC
TACCGCAAGGCCATTCAAGCGAGAACTAAAGTAGCGGAGGCGTTGGGATTAGTAGTGAGA
GATAGGAGGAAAGAGAGAGAAGGAGGAGAGAGAAAGAATGATATGTTGGAGTCGTTGTTT
GAAGGAGATGGCGCCGCCGGAGTTGAAGGAGGAGGATTTTCCGATGAGGAAATTGTTGAT
TTTATACTGGCGTTGCTTGTTGCTGGCTATGAAACCACCTCTACCATCATGACCCTTGCT
GTCAAATTCCTCACTGAGACACCCCATGCTCTCTCACAACTTAAGGAAGAGCACGAGGAG
ATCAGGTTAAGAAAAGGTGAAGTTGAATCTTTACAATGGGAAGATTACAAGTCAATGCCC
TTCACTCAATGTGTTGTTAATGAAACTCTGCGAATCGCTAACATAATTAGCGGAGTGTTC
AGGAGAGCCATGACTGACATAAATATCAAAGGTTATACCATTCCCAAAGGTTGGAAGGTT
TTTGCTTCTTTCCGAGCTGTTCATCTAGACCATGAACATTTCAAAGATGCGCGTACATTT
GATCCATGGAGGTGGCAGAGTAGTGCAGGACCGACAAGCTCACCTAACGTATTCACACCA
TTTGGTGGGGGACCTCGTCGCTGTCCTGGTTACGAGCTTGCTAGAGTGGAACTCTCTGTT
TTCCTACACCACTTGGTGACTCGTTTTAGTTGGGTTCCGGCTGAGGCAGATAAGTTAATT
TTCTTCCCAACGACAAGGATGCAGAAGCGATATCCAATTAACGTCCAACATCGAAGCTTG
TTTGAGCAGAGAGAAGAAGAGAGTGGTTTGTGA