Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061186
CDS Infomation

pacid=37452447 polypeptide=PGSC0003DMP400041200 locus=PGSC0003DMG400023817 ID=PGSC0003DMT400061186.v4.03 annot-version=v4.03
Sequence

ATGTCTGAGAAAAAGAAGATGAGAAGTGAAGCCAGCAGCAGTAGCAGCAACAGTAATAGC
ATCACTGCTGGAAACGATTCTGTGGTTGTTGATGTTGGTCGACGTAGAAGCCCATGTGGT
TACTGTAAATCTGGTGGTCCCACTAGTATCTCTCACGGATTATGGACACGCAGTCTGACA
GTTGATGACTATCAAGCTCTTCTAGATAGAGGATGGAGAAGATCTGGCTGTTTCTTATAC
AAACCAGAGATGGAAAAGACATGCTGTCCATCTTACACCATCCGTCTCAAAGAAAATGAT
TTTGTTCCTTCCAAAGAACAACGCCGAGTACTGAATCGAATGCAGAGGTTTCTGGATGGC
ACATTAGATAAAAGTTCAGATGAGTTGATGGATGCAACAGATACTTCAGGCGATTCACAA
ATCACTACCTCTAGTCAAAGTCGAAGCCTTGCAGCAACGAAGTCCTTGACAGGTAACCTT
GAAGAAAAGTACAAAACTGAACTGTTGATCCCCCATATGGAAAGTCAGATAGATAATGCA
GTACATGTGTGCATTGAAAGTGGGGATCTTTCTTCTGATTTTCAGTTTCCAAAAGCCTCT
GTAAAAAAGGTTGCACCTGCGAAAAGAAAGTTATCCACTGAAGGGTCAGAGGATCTGTTA
TTTACCAGCAGCATCTCGTTCCAGATTGCAGCTACTTTAAGGCGACAAAGAAAAGGTGTT
GAACATGAAAAATCATCACAATTGGGGGCTGGGGAAAGAGGGCAAGCCGCTGATACCCCA
AAAGTTATTGCTGCAACACTAGCTACCCATCTAAACTCTCTAGCAGAATCATTGGGATTA
TTAGTTAGAGCTTGCAACGGACATATAAACTTTTATTCTTCCGAAAGACGAGTTGATAAA
GATGCCATAGTCAGCAGCCATAATGAGTCGAAGCAATCCTCATCAGGAAGCTGTAGTAAA
GAGAGCTTCTCATCAACAGCACATGAAAACCACGATCTCAAAAAGAGGAGGTTTGAGGTT
CGTCTTAAAAGGTCCAGTTTTGATCCCGAAGAATATTCCTTGTATAGGAGGTACCAGATT
AGAGTGCACAATGATTCTCCTGATGAAGTCGCTGAGAGCTCATACAGGAGATTTTTGGTT
GATACACCCTTAATATTTGTTCCCCCATCGGGGGACCTTACTGTCCCCCCTTGTGGCTTT
GGTTCTTTCCATCAGCAGTATCTGATTGATGGACGGTTAGTTGCAGTTGGTGTCATAGAT
ATTCTCCCGAAGTGTTTGTCAAGTAAATATTTATTCTGGGATCCAGATCTTTCCTTCTTA
TCATTAGGTAAGTATTCAGCCCTTCAAGAAATAAGGTGGGTTACACAGAATCAAGTACAT
TGCCCTAGTCTCCAGTACTATTATCTGGGTTACTACATCCACTCCTGCAACAAAATGAGA
TACAAAGCAGCATACCGGCCTTCTGAGCTACTCTGCCCTTTGCGTTATCAGTGGGTTCCA
TTTGATGTTGCCAAGCCACTGCTCGACATGAAATCGTACATGGTTTTATCTGATTTTGCC
ACACAAAATGGACAGCCTCTTCGTCCTAGTAACCTTGAAAATTATGAGGAGCAAAATGAT
CAACAACACTTTCACGGATCAAATGATATTTCTGTTGGCGAGGATGAGGAAATGGATGAA
TTTAATTATGAAGATTCAGATGAGGAATTGGTTGCTGAGAGCAGTAACATCCATCTGCCC
AAAGTAGAAGACAAAGATGTTGGTAGCATTTTGATTGGGTTGAAGGAAGTTCGTCTGAGA
TACAAAGTAATGCTAATTGACCTGTCACAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400041200
PEP Infomation

pacid=37452447 transcript=PGSC0003DMT400061186 locus=PGSC0003DMG400023817 ID=PGSC0003DMT400061186.v4.03 annot-version=v4.03
Sequence

MSEKKKMRSEASSSSSNSNSITAGNDSVVVDVGRRRSPCGYCKSGGPTSISHGLWTRSLT
VDDYQALLDRGWRRSGCFLYKPEMEKTCCPSYTIRLKENDFVPSKEQRRVLNRMQRFLDG
TLDKSSDELMDATDTSGDSQITTSSQSRSLAATKSLTGNLEEKYKTELLIPHMESQIDNA
VHVCIESGDLSSDFQFPKASVKKVAPAKRKLSTEGSEDLLFTSSISFQIAATLRRQRKGV
EHEKSSQLGAGERGQAADTPKVIAATLATHLNSLAESLGLLVRACNGHINFYSSERRVDK
DAIVSSHNESKQSSSGSCSKESFSSTAHENHDLKKRRFEVRLKRSSFDPEEYSLYRRYQI
RVHNDSPDEVAESSYRRFLVDTPLIFVPPSGDLTVPPCGFGSFHQQYLIDGRLVAVGVID
ILPKCLSSKYLFWDPDLSFLSLGKYSALQEIRWVTQNQVHCPSLQYYYLGYYIHSCNKMR
YKAAYRPSELLCPLRYQWVPFDVAKPLLDMKSYMVLSDFATQNGQPLRPSNLENYEEQND
QQHFHGSNDISVGEDEEMDEFNYEDSDEELVAESSNIHLPKVEDKDVGSILIGLKEVRLR
YKVMLIDLSQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400061186
Transcript Infomation

pacid=37452447 locus=PGSC0003DMG400023817 ID=PGSC0003DMT400061186.v4.03 annot-version=v4.03
Sequence

ATGTCTGAGAAAAAGAAGATGAGAAGTGAAGCCAGCAGCAGTAGCAGCAACAGTAATAGC
ATCACTGCTGGAAACGATTCTGTGGTTGTTGATGTTGGTCGACGTAGAAGCCCATGTGGT
TACTGTAAATCTGGTGGTCCCACTAGTATCTCTCACGGATTATGGACACGCAGTCTGACA
GTTGATGACTATCAAGCTCTTCTAGATAGAGGATGGAGAAGATCTGGCTGTTTCTTATAC
AAACCAGAGATGGAAAAGACATGCTGTCCATCTTACACCATCCGTCTCAAAGAAAATGAT
TTTGTTCCTTCCAAAGAACAACGCCGAGTACTGAATCGAATGCAGAGGTTTCTGGATGGC
ACATTAGATAAAAGTTCAGATGAGTTGATGGATGCAACAGATACTTCAGGCGATTCACAA
ATCACTACCTCTAGTCAAAGTCGAAGCCTTGCAGCAACGAAGTCCTTGACAGGTAACCTT
GAAGAAAAGTACAAAACTGAACTGTTGATCCCCCATATGGAAAGTCAGATAGATAATGCA
GTACATGTGTGCATTGAAAGTGGGGATCTTTCTTCTGATTTTCAGTTTCCAAAAGCCTCT
GTAAAAAAGGTTGCACCTGCGAAAAGAAAGTTATCCACTGAAGGGTCAGAGGATCTGTTA
TTTACCAGCAGCATCTCGTTCCAGATTGCAGCTACTTTAAGGCGACAAAGAAAAGGTGTT
GAACATGAAAAATCATCACAATTGGGGGCTGGGGAAAGAGGGCAAGCCGCTGATACCCCA
AAAGTTATTGCTGCAACACTAGCTACCCATCTAAACTCTCTAGCAGAATCATTGGGATTA
TTAGTTAGAGCTTGCAACGGACATATAAACTTTTATTCTTCCGAAAGACGAGTTGATAAA
GATGCCATAGTCAGCAGCCATAATGAGTCGAAGCAATCCTCATCAGGAAGCTGTAGTAAA
GAGAGCTTCTCATCAACAGCACATGAAAACCACGATCTCAAAAAGAGGAGGTTTGAGGTT
CGTCTTAAAAGGTCCAGTTTTGATCCCGAAGAATATTCCTTGTATAGGAGGTACCAGATT
AGAGTGCACAATGATTCTCCTGATGAAGTCGCTGAGAGCTCATACAGGAGATTTTTGGTT
GATACACCCTTAATATTTGTTCCCCCATCGGGGGACCTTACTGTCCCCCCTTGTGGCTTT
GGTTCTTTCCATCAGCAGTATCTGATTGATGGACGGTTAGTTGCAGTTGGTGTCATAGAT
ATTCTCCCGAAGTGTTTGTCAAGTAAATATTTATTCTGGGATCCAGATCTTTCCTTCTTA
TCATTAGGTAAGTATTCAGCCCTTCAAGAAATAAGGTGGGTTACACAGAATCAAGTACAT
TGCCCTAGTCTCCAGTACTATTATCTGGGTTACTACATCCACTCCTGCAACAAAATGAGA
TACAAAGCAGCATACCGGCCTTCTGAGCTACTCTGCCCTTTGCGTTATCAGTGGGTTCCA
TTTGATGTTGCCAAGCCACTGCTCGACATGAAATCGTACATGGTTTTATCTGATTTTGCC
ACACAAAATGGACAGCCTCTTCGTCCTAGTAACCTTGAAAATTATGAGGAGCAAAATGAT
CAACAACACTTTCACGGATCAAATGATATTTCTGTTGGCGAGGATGAGGAAATGGATGAA
TTTAATTATGAAGATTCAGATGAGGAATTGGTTGCTGAGAGCAGTAACATCCATCTGCCC
AAAGTAGAAGACAAAGATGTTGGTAGCATTTTGATTGGGTTGAAGGAAGTTCGTCTGAGA
TACAAAGTAATGCTAATTGACCTGTCACAATAA