Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061170
CDS Infomation

pacid=37440166 polypeptide=PGSC0003DMP400041188 locus=PGSC0003DMG400023803 ID=PGSC0003DMT400061170.v4.03 annot-version=v4.03
Sequence

ATGGAGAAATACGAGCTTGTGAAGGATATAGGGTCTGGGAATTTTGGTGTTGCAAGGCTC
ATGAGGAACAAGGAGACCAAAGAACTCGTGGCAATGAAATACATTGAGAGAGGACACAAG
ATTGATGAGAATGTAGCAAGGGAGATCATTAATCATAAATCACTTCGACATCCAAACATA
ATTCGCTTCAAGGAGGTGGTATTGACTCCCACTCATCTTGCCATTGTTATGGAATATGCA
GCTGGGGGAGAACTGTTTGAGCGCATTTGCAATGCAGGAAGGTTCAGTGAAGATGAGGCC
AGATACTTTTTCCAGCAGCTTATTTCAGGTGTCCACTACTGTCACAACATGCAAATATGT
CATAGAGACCTGAAGCTGGAGAATACCCTTCTTGATGGAAGTGCAGCTCCACGCTTGAAG
ATATGTGATTTTGGATACTCAAAGTCGTCCCTGTTGCATTCGAGGCCAAAATCAACTGTT
GGGACTCCAGCTTATATTGCTCCAGAGGTCCTCTCCAGAAGGGAATATGATGGCAAGCTG
GCTGATGTCTGGTCATGTGGAGTGACACTTTACGTGATGCTGGTTGGGGCATACCCTTTT
GAAGACCAGGAGGATCCAAAGAACTTTAGGAAAACTATTCAACGAATAATGGCGGTACAG
TACAAGATTCCTGACTATGTTCACATATCGCAAGATTGTAGGCACCTTCTCTCTCGCATA
TTTGTTGCCAATTCCGCAAGGAGAATCACAATCAAAGAAATCAAGTCGCACCCATGGTTT
TTGAAGAATTTGCCTAGGGAGTTGACAGAAGCAGCACAGGCAGCTTATTATAGAAAAGAA
AACCCGACATTTTCGCTTCAGAGTGTGGAGGAGATCATGAAAATTGTGGAAGAGGCAAAG
ACCCCTCCTCCAGTTTCCCGTTCAGTATCAGGTTTTGGCTGGGGAGGTGAAGAAGAAGAA
GAGGAGAAGGAAGGAGATGTAGAAGAAGAAGTAGAGGAGGAGGAGGATGAAGAAGAAGAA
GACGAATATGACAAACAAGTGAAACAAGCACACCAAAGCTTAGGGGAAGTTCGTCTCACC
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400041188
PEP Infomation

pacid=37440166 transcript=PGSC0003DMT400061170 locus=PGSC0003DMG400023803 ID=PGSC0003DMT400061170.v4.03 annot-version=v4.03
Sequence

MEKYELVKDIGSGNFGVARLMRNKETKELVAMKYIERGHKIDENVAREIINHKSLRHPNI
IRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHYCHNMQIC
HRDLKLENTLLDGSAAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKL
ADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRI
FVANSARRITIKEIKSHPWFLKNLPRELTEAAQAAYYRKENPTFSLQSVEEIMKIVEEAK
TPPPVSRSVSGFGWGGEEEEEEKEGDVEEEVEEEEDEEEEDEYDKQVKQAHQSLGEVRLT
*

Transcript Sequence

Transcript ID

PGSC0003DMT400061170
Transcript Infomation

pacid=37440166 locus=PGSC0003DMG400023803 ID=PGSC0003DMT400061170.v4.03 annot-version=v4.03
Sequence

ATGGAGAAATACGAGCTTGTGAAGGATATAGGGTCTGGGAATTTTGGTGTTGCAAGGCTC
ATGAGGAACAAGGAGACCAAAGAACTCGTGGCAATGAAATACATTGAGAGAGGACACAAG
ATTGATGAGAATGTAGCAAGGGAGATCATTAATCATAAATCACTTCGACATCCAAACATA
ATTCGCTTCAAGGAGGTGGTATTGACTCCCACTCATCTTGCCATTGTTATGGAATATGCA
GCTGGGGGAGAACTGTTTGAGCGCATTTGCAATGCAGGAAGGTTCAGTGAAGATGAGGCC
AGATACTTTTTCCAGCAGCTTATTTCAGGTGTCCACTACTGTCACAACATGCAAATATGT
CATAGAGACCTGAAGCTGGAGAATACCCTTCTTGATGGAAGTGCAGCTCCACGCTTGAAG
ATATGTGATTTTGGATACTCAAAGTCGTCCCTGTTGCATTCGAGGCCAAAATCAACTGTT
GGGACTCCAGCTTATATTGCTCCAGAGGTCCTCTCCAGAAGGGAATATGATGGCAAGCTG
GCTGATGTCTGGTCATGTGGAGTGACACTTTACGTGATGCTGGTTGGGGCATACCCTTTT
GAAGACCAGGAGGATCCAAAGAACTTTAGGAAAACTATTCAACGAATAATGGCGGTACAG
TACAAGATTCCTGACTATGTTCACATATCGCAAGATTGTAGGCACCTTCTCTCTCGCATA
TTTGTTGCCAATTCCGCAAGGAGAATCACAATCAAAGAAATCAAGTCGCACCCATGGTTT
TTGAAGAATTTGCCTAGGGAGTTGACAGAAGCAGCACAGGCAGCTTATTATAGAAAAGAA
AACCCGACATTTTCGCTTCAGAGTGTGGAGGAGATCATGAAAATTGTGGAAGAGGCAAAG
ACCCCTCCTCCAGTTTCCCGTTCAGTATCAGGTTTTGGCTGGGGAGGTGAAGAAGAAGAA
GAGGAGAAGGAAGGAGATGTAGAAGAAGAAGTAGAGGAGGAGGAGGATGAAGAAGAAGAA
GACGAATATGACAAACAAGTGAAACAAGCACACCAAAGCTTAGGGGAAGTTCGTCTCACC
TAA