Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061157
CDS Infomation

pacid=37437099 polypeptide=PGSC0003DMP400041180 locus=PGSC0003DMG400023799 ID=PGSC0003DMT400061157.v4.03 annot-version=v4.03
Sequence

ATGGATTTGAGTCAATCTCAATCGAGTAATCTGTCGTTAGGGTTTATTACTCATGTATCA
CCGGTGATGACCGCACCCAATCGGTCTCATATCGTCGATGATTCGATTGCTTTTCAGATC
GATTCTAGGGTTAAGGACCAATCGTATCCGGTTACGCCGGTTCCACTTCAACTGATGGAT
AAACAAACGAAGGAGAATGGGAAGGAGGGGGGAGAGAGTGCGGATGAGGAGAGGGATGTC
GAGGAGTTTCGAATTTTAGGGCATTCCATGTGTATTAAGCGGAAGAGAGATACTGATGCG
ACTTCGTCTTCTTCCTCTTCAAAGAGTTTTAGGGCTACGAGTTCTAATGAGAATTTGCTA
GGGCTTGAATCGCGAAGAAATGCGGTTAGGGCTTGGGGTAATCAGGGTTTACAGGCAGCT
GACCCGGATATATTTGAGATTATGGAGAAGGAGAAGCAGAGGCAGTACAAAGGGATTGAA
CTGATTGCTTCTGAAAATTTTGTATGCAAGGCTGTGATGGAGGCGTTAGGGAGCCATTTA
ACGAACAAGTATTCTGAAGGAGCACCAGGTGCAAGGTATTATGGTGGTAATCAGTTTATA
GATGAAATTGAGACATTATGTTGTCAGCGTGCTTTAACTGCTTTTGGACTTGACCCGGAG
AATTGGGGTGTGAATGTGCAACCATATTCATGTACTTCAGCAAACTTTGCAGTTTATACA
GGCTTATTACTGCCTGGTGATCGTATAATGGGATTGGATACACCATCTGGTGGAAACACA
AGTCACGGATATTATCTTCCTAATGGGAGGAGAGTTTCAGGGGCTTCAATTTTCTTTGAG
TCTCTGTCTTACAAGGTTGACCCCCAAACTGGGTATGTAGATTTTGATAAGCTCGAGGAA
AGGGCTCTTGATTTCCGTCCCAAGATACTTATATGTGGGGGGAGTTCGTATCCCCGGGAA
TGGGATTATGCAAAGTTTAGACAGATTGCTGACAAATGTGGTGCGGTTTTGTTGTGTGAT
ATGGCACAAATTAGTGGTCTCATTGCTGCAAAGGAATGCGCGAGTCCGTTTGATTATTGT
GATATAGTTACCTCAACAACTCACAAAAGTCTTCGAGGTCCCAGGGGAGGTATTATCTTT
TATAGGAAAGGTTCAAAGCCAAGAAAGAGAGGCCTGCTCTTGAATCAAGGTGATGGCAGT
GATAAGTATGATTTTGAGGAAAAGATAAACTTTGCTGTTTTTCCTGCACTGCAAGGGGGG
CCACACAACAACCATATTGCTGCCCTCGCCATAGCATTGAAGCAAGTGGCTACTCCTGAT
TACAAGGCTTATATGCAACAAGTTAAGAGAAATGCTCAGGCGTTGGCAGCGGCTTTATTG
AGAAGAAACTGCAGACTGGTTACTGGAGGGACTGACAATCACATGATATTGTGGGATCTA
AGAAATCTTGGGTTAACAGGTAAGAATTTTGAGAAGGTCTGCGAGTTGTGTCACATCACT
CTCAACAAAGTAATGGTCTTTGATGATAATGGAAGTATTACTCCTGGAGGTGTGAGGATC
GGGACCCCTGCTATGACATCACGAGGCTGTATAGAGAGTGATTTTGATACAATGGCAGAT
TTCCTCCTCAAGGCAGCACAGATTACAAATTCGATACAGAGAGAACATGGAAAGCTCGCT
AAGGGTTTTCTGAAAGGCGTTGAGAACAATAAAGATGTTATCGAGTTACGAACACGTGTT
GAAAATTTTGCATCCCTCTTTGCAATGCCTGGGTTTGAAGTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400041180
PEP Infomation

pacid=37437099 transcript=PGSC0003DMT400061157 locus=PGSC0003DMG400023799 ID=PGSC0003DMT400061157.v4.03 annot-version=v4.03
Sequence

MDLSQSQSSNLSLGFITHVSPVMTAPNRSHIVDDSIAFQIDSRVKDQSYPVTPVPLQLMD
KQTKENGKEGGESADEERDVEEFRILGHSMCIKRKRDTDATSSSSSSKSFRATSSNENLL
GLESRRNAVRAWGNQGLQAADPDIFEIMEKEKQRQYKGIELIASENFVCKAVMEALGSHL
TNKYSEGAPGARYYGGNQFIDEIETLCCQRALTAFGLDPENWGVNVQPYSCTSANFAVYT
GLLLPGDRIMGLDTPSGGNTSHGYYLPNGRRVSGASIFFESLSYKVDPQTGYVDFDKLEE
RALDFRPKILICGGSSYPREWDYAKFRQIADKCGAVLLCDMAQISGLIAAKECASPFDYC
DIVTSTTHKSLRGPRGGIIFYRKGSKPRKRGLLLNQGDGSDKYDFEEKINFAVFPALQGG
PHNNHIAALAIALKQVATPDYKAYMQQVKRNAQALAAALLRRNCRLVTGGTDNHMILWDL
RNLGLTGKNFEKVCELCHITLNKVMVFDDNGSITPGGVRIGTPAMTSRGCIESDFDTMAD
FLLKAAQITNSIQREHGKLAKGFLKGVENNKDVIELRTRVENFASLFAMPGFEV*

Transcript Sequence

Transcript ID

PGSC0003DMT400061157
Transcript Infomation

pacid=37437099 locus=PGSC0003DMG400023799 ID=PGSC0003DMT400061157.v4.03 annot-version=v4.03
Sequence

ATGGATTTGAGTCAATCTCAATCGAGTAATCTGTCGTTAGGGTTTATTACTCATGTATCA
CCGGTGATGACCGCACCCAATCGGTCTCATATCGTCGATGATTCGATTGCTTTTCAGATC
GATTCTAGGGTTAAGGACCAATCGTATCCGGTTACGCCGGTTCCACTTCAACTGATGGAT
AAACAAACGAAGGAGAATGGGAAGGAGGGGGGAGAGAGTGCGGATGAGGAGAGGGATGTC
GAGGAGTTTCGAATTTTAGGGCATTCCATGTGTATTAAGCGGAAGAGAGATACTGATGCG
ACTTCGTCTTCTTCCTCTTCAAAGAGTTTTAGGGCTACGAGTTCTAATGAGAATTTGCTA
GGGCTTGAATCGCGAAGAAATGCGGTTAGGGCTTGGGGTAATCAGGGTTTACAGGCAGCT
GACCCGGATATATTTGAGATTATGGAGAAGGAGAAGCAGAGGCAGTACAAAGGGATTGAA
CTGATTGCTTCTGAAAATTTTGTATGCAAGGCTGTGATGGAGGCGTTAGGGAGCCATTTA
ACGAACAAGTATTCTGAAGGAGCACCAGGTGCAAGGTATTATGGTGGTAATCAGTTTATA
GATGAAATTGAGACATTATGTTGTCAGCGTGCTTTAACTGCTTTTGGACTTGACCCGGAG
AATTGGGGTGTGAATGTGCAACCATATTCATGTACTTCAGCAAACTTTGCAGTTTATACA
GGCTTATTACTGCCTGGTGATCGTATAATGGGATTGGATACACCATCTGGTGGAAACACA
AGTCACGGATATTATCTTCCTAATGGGAGGAGAGTTTCAGGGGCTTCAATTTTCTTTGAG
TCTCTGTCTTACAAGGTTGACCCCCAAACTGGGTATGTAGATTTTGATAAGCTCGAGGAA
AGGGCTCTTGATTTCCGTCCCAAGATACTTATATGTGGGGGGAGTTCGTATCCCCGGGAA
TGGGATTATGCAAAGTTTAGACAGATTGCTGACAAATGTGGTGCGGTTTTGTTGTGTGAT
ATGGCACAAATTAGTGGTCTCATTGCTGCAAAGGAATGCGCGAGTCCGTTTGATTATTGT
GATATAGTTACCTCAACAACTCACAAAAGTCTTCGAGGTCCCAGGGGAGGTATTATCTTT
TATAGGAAAGGTTCAAAGCCAAGAAAGAGAGGCCTGCTCTTGAATCAAGGTGATGGCAGT
GATAAGTATGATTTTGAGGAAAAGATAAACTTTGCTGTTTTTCCTGCACTGCAAGGGGGG
CCACACAACAACCATATTGCTGCCCTCGCCATAGCATTGAAGCAAGTGGCTACTCCTGAT
TACAAGGCTTATATGCAACAAGTTAAGAGAAATGCTCAGGCGTTGGCAGCGGCTTTATTG
AGAAGAAACTGCAGACTGGTTACTGGAGGGACTGACAATCACATGATATTGTGGGATCTA
AGAAATCTTGGGTTAACAGGTAAGAATTTTGAGAAGGTCTGCGAGTTGTGTCACATCACT
CTCAACAAAGTAATGGTCTTTGATGATAATGGAAGTATTACTCCTGGAGGTGTGAGGATC
GGGACCCCTGCTATGACATCACGAGGCTGTATAGAGAGTGATTTTGATACAATGGCAGAT
TTCCTCCTCAAGGCAGCACAGATTACAAATTCGATACAGAGAGAACATGGAAAGCTCGCT
AAGGGTTTTCTGAAAGGCGTTGAGAACAATAAAGATGTTATCGAGTTACGAACACGTGTT
GAAAATTTTGCATCCCTCTTTGCAATGCCTGGGTTTGAAGTATAA