Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061103
CDS Infomation

pacid=37436767 polypeptide=PGSC0003DMP400041147 locus=PGSC0003DMG400023773 ID=PGSC0003DMT400061103.v4.03 annot-version=v4.03
Sequence

ATGGAAACAAGTGAACCTACATTAGCCCCACAATGGTTAAGGAGCAGTAAACATGTGACA
AGCTTCGTCACCGCGTCATCCCCGTTGCATCCAGATGATGCCGCCCCATCAAAACTTGCA
CACAAGAGATCACTGTCAGTGAATACGGACAGTAAAGAGTGGAGGCGTCCTGCTGCATCT
GATCGAGCCATCTCATCACGGACTCGGTGGAGCTCCAACAGTAGTAACTCCCCTAACTTT
CAATCTTACAATAGTTTTAGAAATCATCACAGAGACATTGATAAAGACATTAACGATTAC
CGGGAGACATCAACTTTAAGAAATCATAGGTCTAGGGACTTTCCTGATACTTCGAGGAAA
CATCACTGGGAAATATTTGAGGAAGGGTTAAGACAGTCTCCTTCAATGACTTCTGGTAGA
ATTAGTGAGAAATGGCCTAGGAATTTGAGCAATGCTGGTAAGATCAAACTACCTGACAAC
AATGGCATGCTTGCTTCAGTTTGTGGTGCGGATAAAGCAATTGAATGTGGCATCCGACCC
TTAGTAACTGAAAAACGACAAGCATCACCTGGCCTTGGAAGAGTCGGATCTCCTGGTTTG
GGTACCAGGACTCAGAGTATACCAACAAGTCCATCAGGCACTACTGGCAATAAGTTGGCA
TCTGCGTTAGCAGTTACTACAGCAGTGGCCGGCAATGATAACTCTGGTCTATCTTCCATG
AAACGAGCTGCCTCTTCTGGACTTTCTTCTCCAATTTTTAGCAAGTCAAGTGGTAGATGT
CTTAATATGGCTGAAACTGTCGCAAAGGGTCTTCCTTGTGCTCAGACTATTTCCCAGGTG
TCCCAAGCAAATCACCGACTTGAAGAGCTTGCTATGAAGCAATCTAGGCAATTGATACCA
TTGGTGGCTAAGGCCTCGGTGCCAAATCCTTCTGATAAATCTAGAACCAAGGTTGAGTTG
CGGCAACAAATCGTCTCATCGTCTCATCCTGTCGGTCACAGTCTCTCAAGCGTCTGCATC
TCAAGCAGGATTCACGTCTATAAGCCAACAAGAGAGAGGAATGGTGTTTCTTCTATTGTT
AACAGTAGCTTGAGCCCAAATAAACACAGCAGAGGGCCAAATGCGCTTTTGGCTGTTCCC
GTGTCTGCTTCTACACACAGTCCAGCAAATATTGCAGCTCCCTCTACCTTTGAACCCAAG
CCTGTTGGGACAATGGTGCAAAAGAAATTATCATCCCAAGCTCGGAGTCGGAATGATTTC
TTCGATCTTATGAGAAAGAAATCTAATGCACATGGTATCACTCAGGATCAAGACGCCTCA
CTATCTGATGAGACCCCAAGGGTCGAGCAATCAACTGAGATCTTGGGTGAAAATACATGC
AACAGTGACTCTTCCGACAGAAAGAATACTGACAAGAGCTTTTCAAATTGTGATGCAATG
TTGTGTTCAGACGAGGAAGAGGCTGCACTATTGCGTTCTATGGGCTGGGAGGAAAATGCT
GATGAGGGCGGCCTTACAGAGGAGGAGATCAGTGCCTTCTACAAAGATGTTACAAAGTGC
ATCAATTCGAAGCTGTCATTTAAGACAATGCCAGGCTTACAATCGAAGTTTATGTTGCCT
CTCCACTCTGGAATTGGAGGTGTTGGCGCCATTTCTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400041147
PEP Infomation

pacid=37436767 transcript=PGSC0003DMT400061103 locus=PGSC0003DMG400023773 ID=PGSC0003DMT400061103.v4.03 annot-version=v4.03
Sequence

METSEPTLAPQWLRSSKHVTSFVTASSPLHPDDAAPSKLAHKRSLSVNTDSKEWRRPAAS
DRAISSRTRWSSNSSNSPNFQSYNSFRNHHRDIDKDINDYRETSTLRNHRSRDFPDTSRK
HHWEIFEEGLRQSPSMTSGRISEKWPRNLSNAGKIKLPDNNGMLASVCGADKAIECGIRP
LVTEKRQASPGLGRVGSPGLGTRTQSIPTSPSGTTGNKLASALAVTTAVAGNDNSGLSSM
KRAASSGLSSPIFSKSSGRCLNMAETVAKGLPCAQTISQVSQANHRLEELAMKQSRQLIP
LVAKASVPNPSDKSRTKVELRQQIVSSSHPVGHSLSSVCISSRIHVYKPTRERNGVSSIV
NSSLSPNKHSRGPNALLAVPVSASTHSPANIAAPSTFEPKPVGTMVQKKLSSQARSRNDF
FDLMRKKSNAHGITQDQDASLSDETPRVEQSTEILGENTCNSDSSDRKNTDKSFSNCDAM
LCSDEEEAALLRSMGWEENADEGGLTEEEISAFYKDVTKCINSKLSFKTMPGLQSKFMLP
LHSGIGGVGAISS*

Transcript Sequence

Transcript ID

PGSC0003DMT400061103
Transcript Infomation

pacid=37436767 locus=PGSC0003DMG400023773 ID=PGSC0003DMT400061103.v4.03 annot-version=v4.03
Sequence

ATGGAAACAAGTGAACCTACATTAGCCCCACAATGGTTAAGGAGCAGTAAACATGTGACA
AGCTTCGTCACCGCGTCATCCCCGTTGCATCCAGATGATGCCGCCCCATCAAAACTTGCA
CACAAGAGATCACTGTCAGTGAATACGGACAGTAAAGAGTGGAGGCGTCCTGCTGCATCT
GATCGAGCCATCTCATCACGGACTCGGTGGAGCTCCAACAGTAGTAACTCCCCTAACTTT
CAATCTTACAATAGTTTTAGAAATCATCACAGAGACATTGATAAAGACATTAACGATTAC
CGGGAGACATCAACTTTAAGAAATCATAGGTCTAGGGACTTTCCTGATACTTCGAGGAAA
CATCACTGGGAAATATTTGAGGAAGGGTTAAGACAGTCTCCTTCAATGACTTCTGGTAGA
ATTAGTGAGAAATGGCCTAGGAATTTGAGCAATGCTGGTAAGATCAAACTACCTGACAAC
AATGGCATGCTTGCTTCAGTTTGTGGTGCGGATAAAGCAATTGAATGTGGCATCCGACCC
TTAGTAACTGAAAAACGACAAGCATCACCTGGCCTTGGAAGAGTCGGATCTCCTGGTTTG
GGTACCAGGACTCAGAGTATACCAACAAGTCCATCAGGCACTACTGGCAATAAGTTGGCA
TCTGCGTTAGCAGTTACTACAGCAGTGGCCGGCAATGATAACTCTGGTCTATCTTCCATG
AAACGAGCTGCCTCTTCTGGACTTTCTTCTCCAATTTTTAGCAAGTCAAGTGGTAGATGT
CTTAATATGGCTGAAACTGTCGCAAAGGGTCTTCCTTGTGCTCAGACTATTTCCCAGGTG
TCCCAAGCAAATCACCGACTTGAAGAGCTTGCTATGAAGCAATCTAGGCAATTGATACCA
TTGGTGGCTAAGGCCTCGGTGCCAAATCCTTCTGATAAATCTAGAACCAAGGTTGAGTTG
CGGCAACAAATCGTCTCATCGTCTCATCCTGTCGGTCACAGTCTCTCAAGCGTCTGCATC
TCAAGCAGGATTCACGTCTATAAGCCAACAAGAGAGAGGAATGGTGTTTCTTCTATTGTT
AACAGTAGCTTGAGCCCAAATAAACACAGCAGAGGGCCAAATGCGCTTTTGGCTGTTCCC
GTGTCTGCTTCTACACACAGTCCAGCAAATATTGCAGCTCCCTCTACCTTTGAACCCAAG
CCTGTTGGGACAATGGTGCAAAAGAAATTATCATCCCAAGCTCGGAGTCGGAATGATTTC
TTCGATCTTATGAGAAAGAAATCTAATGCACATGGTATCACTCAGGATCAAGACGCCTCA
CTATCTGATGAGACCCCAAGGGTCGAGCAATCAACTGAGATCTTGGGTGAAAATACATGC
AACAGTGACTCTTCCGACAGAAAGAATACTGACAAGAGCTTTTCAAATTGTGATGCAATG
TTGTGTTCAGACGAGGAAGAGGCTGCACTATTGCGTTCTATGGGCTGGGAGGAAAATGCT
GATGAGGGCGGCCTTACAGAGGAGGAGATCAGTGCCTTCTACAAAGATGTTACAAAGTGC
ATCAATTCGAAGCTGTCATTTAAGACAATGCCAGGCTTACAATCGAAGTTTATGTTGCCT
CTCCACTCTGGAATTGGAGGTGTTGGCGCCATTTCTTCTTGA