Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061059
CDS Infomation

pacid=37436199 polypeptide=PGSC0003DMP400041113 locus=PGSC0003DMG400023759 ID=PGSC0003DMT400061059.v4.03 annot-version=v4.03
Sequence

ATGGAATCGTGCTGCATTGAGCAGTTTCTCGAGGGAAAGACCATTTTCATCACTGGTGCA
ACGGGCTACCTAGCAAAGATTCTCACTGAGAAGATACTCAGAGTCCAACCAAATGTGAAG
AAGATGTACTTGCTAATAAGAGCTCCAGATTCAAATTCAGCTAAACAACGCTTTAACAAC
GAGGTTATAAAAGCTGATCTGTTCGGAGTTCTGAGGGAGAAGTTGGGCGCCAACCTACAT
GGCTTTATAGAAGACAAAGTTTTCCCAGTTGCAGGGGATATAGATTGTGATAGTTTGGGG
ATAAATTCTGAGCTGAAAGATGAGATGTGCAGAGAAATAGACATAATTGTAAACTCAGCT
GCAACAACTAGATTTGATGAAAGATATGATACTGCAATAAGGACCAATGTATTGGGTGCC
ATGCATGTTCTCAATTTTTCCAAGCAGTGTTCAAAACTTATGATGCTTCTCCATGTAAGC
ACAGCCCATGTTTGTGGGGAAAAGGAAGGATTGATACTAGAGAAGCCATTGAACTACGGT
GAGACGCTTAATGGAAGCTCTCACTTAGACATAGACATGGAGCAAAAGTTGGTAGAGGAG
GCACTAAAGGAACTTCAAGATAGAAATGCCACTGAAAAAGAAGTTAGGCTAGCTATGAGA
GTTCTAGGTATTGAGAGGGCAAGGCAACATGGATGGCCAAACACATACTCATTCACAAAA
TCAATGGGAGAGATGCTTTTGGTACACCTCAAGGAGGATCTCCAACTCATAATTCTACGG
CCAACGATTATATTGAGCACTTACAAGGAGCCATTCCCTGGATGGATTGAAGGAATGAAA
ACCGCGGACACGTTCATCGTTGGCTATGGTAAAGGAAAACAGAAACTTGCAATGGGTGGC
AGAGAAACCATAACAGATGTGATTCCAGCTGATATGGTCATAAACTCAGTCATTGCGGCT
ATGGTAGCCCATCGAAATGCATCTTCCCGTGTAGCTGTTTACCATATTAGCTCGTCTAGG
AGGAATCAAATCAAACTTGGTGATTTTATACGAATTGGCGTTGATTACTTCAAGAAGAAT
CCATGGATTGACAAAAGAGGAAAGCCAGTCAAAGTGAAGAAATTTCACTTACTGGATAGC
ATGGATAGCTTTCACAAATATATAGCAATCCACTACATGCCATCATTAAAGATATTAAAG
TGGGGAAACTTGATACTTTGCCGACATTTGCAAGTCCAGCACACAAACTTACAAAGAAGG
ATCAATCAAGCCATTGAACTAGCTGAACTCTACAAACCTTACATGTTCTTCAAAGGAATT
TTCGATGATACGAATGCTGAAATGTTGCGAATGGCAACAAGAGAAAGTAATGCAGATGAT
ACATTCAATTTTGATCCGACAACCATTCAGTGGGATAAATACTTGAAGGAAACTCACATT
CCCGGAGTAGTAAAGTACATTTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400041113
PEP Infomation

pacid=37436199 transcript=PGSC0003DMT400061059 locus=PGSC0003DMG400023759 ID=PGSC0003DMT400061059.v4.03 annot-version=v4.03
Sequence

MESCCIEQFLEGKTIFITGATGYLAKILTEKILRVQPNVKKMYLLIRAPDSNSAKQRFNN
EVIKADLFGVLREKLGANLHGFIEDKVFPVAGDIDCDSLGINSELKDEMCREIDIIVNSA
ATTRFDERYDTAIRTNVLGAMHVLNFSKQCSKLMMLLHVSTAHVCGEKEGLILEKPLNYG
ETLNGSSHLDIDMEQKLVEEALKELQDRNATEKEVRLAMRVLGIERARQHGWPNTYSFTK
SMGEMLLVHLKEDLQLIILRPTIILSTYKEPFPGWIEGMKTADTFIVGYGKGKQKLAMGG
RETITDVIPADMVINSVIAAMVAHRNASSRVAVYHISSSRRNQIKLGDFIRIGVDYFKKN
PWIDKRGKPVKVKKFHLLDSMDSFHKYIAIHYMPSLKILKWGNLILCRHLQVQHTNLQRR
INQAIELAELYKPYMFFKGIFDDTNAEMLRMATRESNADDTFNFDPTTIQWDKYLKETHI
PGVVKYIF*

Transcript Sequence

Transcript ID

PGSC0003DMT400061059
Transcript Infomation

pacid=37436199 locus=PGSC0003DMG400023759 ID=PGSC0003DMT400061059.v4.03 annot-version=v4.03
Sequence

ATGGAATCGTGCTGCATTGAGCAGTTTCTCGAGGGAAAGACCATTTTCATCACTGGTGCA
ACGGGCTACCTAGCAAAGATTCTCACTGAGAAGATACTCAGAGTCCAACCAAATGTGAAG
AAGATGTACTTGCTAATAAGAGCTCCAGATTCAAATTCAGCTAAACAACGCTTTAACAAC
GAGGTTATAAAAGCTGATCTGTTCGGAGTTCTGAGGGAGAAGTTGGGCGCCAACCTACAT
GGCTTTATAGAAGACAAAGTTTTCCCAGTTGCAGGGGATATAGATTGTGATAGTTTGGGG
ATAAATTCTGAGCTGAAAGATGAGATGTGCAGAGAAATAGACATAATTGTAAACTCAGCT
GCAACAACTAGATTTGATGAAAGATATGATACTGCAATAAGGACCAATGTATTGGGTGCC
ATGCATGTTCTCAATTTTTCCAAGCAGTGTTCAAAACTTATGATGCTTCTCCATGTAAGC
ACAGCCCATGTTTGTGGGGAAAAGGAAGGATTGATACTAGAGAAGCCATTGAACTACGGT
GAGACGCTTAATGGAAGCTCTCACTTAGACATAGACATGGAGCAAAAGTTGGTAGAGGAG
GCACTAAAGGAACTTCAAGATAGAAATGCCACTGAAAAAGAAGTTAGGCTAGCTATGAGA
GTTCTAGGTATTGAGAGGGCAAGGCAACATGGATGGCCAAACACATACTCATTCACAAAA
TCAATGGGAGAGATGCTTTTGGTACACCTCAAGGAGGATCTCCAACTCATAATTCTACGG
CCAACGATTATATTGAGCACTTACAAGGAGCCATTCCCTGGATGGATTGAAGGAATGAAA
ACCGCGGACACGTTCATCGTTGGCTATGGTAAAGGAAAACAGAAACTTGCAATGGGTGGC
AGAGAAACCATAACAGATGTGATTCCAGCTGATATGGTCATAAACTCAGTCATTGCGGCT
ATGGTAGCCCATCGAAATGCATCTTCCCGTGTAGCTGTTTACCATATTAGCTCGTCTAGG
AGGAATCAAATCAAACTTGGTGATTTTATACGAATTGGCGTTGATTACTTCAAGAAGAAT
CCATGGATTGACAAAAGAGGAAAGCCAGTCAAAGTGAAGAAATTTCACTTACTGGATAGC
ATGGATAGCTTTCACAAATATATAGCAATCCACTACATGCCATCATTAAAGATATTAAAG
TGGGGAAACTTGATACTTTGCCGACATTTGCAAGTCCAGCACACAAACTTACAAAGAAGG
ATCAATCAAGCCATTGAACTAGCTGAACTCTACAAACCTTACATGTTCTTCAAAGGAATT
TTCGATGATACGAATGCTGAAATGTTGCGAATGGCAACAAGAGAAAGTAATGCAGATGAT
ACATTCAATTTTGATCCGACAACCATTCAGTGGGATAAATACTTGAAGGAAACTCACATT
CCCGGAGTAGTAAAGTACATTTTCTAA