Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400061015
CDS Infomation

pacid=37438657 polypeptide=PGSC0003DMP400041079 locus=PGSC0003DMG400023742 ID=PGSC0003DMT400061015.v4.03 annot-version=v4.03
Sequence

ATGTATGCGAAGCAGAAGAAGCTAAGGCCTCGACTTGACCGGACAAATGCCCTAAAAAAC
GTCGATTACGACGCTTCACAGTCGGTTCCGTCTTCGCCGTCGTCGTTAAGAGATCCACCT
GCTCACCGGACTAGGTCGCTTGACCTTTATCCTGTACCCGACCGTACAAGTTTCAGAATC
GACGGTTCTGCTGGTGAATTCGACACTATTTGCCGCTCTCTCGGGCTTTCTCTTGAAGAC
TTTGCGATTCCGGTAGCTGCGTGGGAAGCTAGGAAACCTTGCTCTCGTTCTGACAGGTTG
CGCAGCACCAGGTTTTCTGATGACAGCCGTGACTCTGATATTAAGCTTGAGGACGCGAAT
GAACTGTCTGATAGTGTTAGAACTGCTGCTAGGGTTACAGTTGACGCTGAATCGAACAGC
CGGTTAAATAATTTGCCCGAAAATGTGATTGAGGTGACGATTAGTGAATCGGATGTAGAG
ACTGAATGCTCTCACTCTGACTGTTTCGGCTCCGAGGATGAGCTTGAGACTGCTGATGAG
GTTAGAAATGGTGTTAGGGGTATTGTTGGCGGTAAATTGAAGCACTTATTATATTCATCA
CCTGAAAATTTGATTAAGGTTAGGGTTAGTGAATCAGAGGACGATAATTTGCCAACGGAT
GTGAAGTGTGGAATTAAGGGTTTTAGACCACCAAGGCTGGCTCCTCCAGCGACAGACGTG
GAGGATTTCACATCTGCTTGGGATTTTATCAAAAGTTTTGGTCCTGCCGATGATGAAGAT
ATGGTTTCACCGTTACCTGATGAGAGCACTTCTGATGACATACTTGTAAACGAGCAAGTA
GAAGAGATTGCTAAGAACGAAGAGCGTAGAGAGGATTTTGTAAGAAATGCTTCACAAGTA
TCAGAGTCTTCTTCGGAAATATCCACTGATAGAGATAACGACTCCTCAGTCTTGAGGACA
GAAAATGATGGAGCTTGTGAAAAGCCATTCGAGCAAGGTGTAAGAGATGCTGCTGAAAGT
TCTAAATCACCTAGTGATGATTCCTACAGCCTGATATCAAAGACAAGCTCCAAGTCACCC
ACCGGTGAATCCGATGACGTTATCTCGGAGATGAGCTCTAAGTCACTGAGTGGTGATTCA
TATGCATTGATTTTGAAGCCTGTACATTCTGTTTCTCCAAATGGTTCCCCCAGTATAAAA
TCTTGGCAGAAGGGCGACTTTCTTGGGAGTGGGTCATTTGGAACAGTGTATGAAGGCTTT
ACCGATGATGGATTCTTTTTTGCCGTCAAAGAAGTTTCGTTGATTGACCCAGGAAACCAA
CAAAGCCTTTTTCAACTTGAACAGGAGATTTCTCTTCTAAGTCGTTTTCGACATAGAAAT
ATAGTTCGCTATCATGGCACAAACAAGGACGAGAGCAAACTGTATATCTTTCTTGAGCTT
GTTACAAAAGGTTCACTTGCTAGTGTCTATCGCAAGTATCGCTTGCGTGATTCCCATGTT
TCAGATTACACCAGGCAAATCTTGAGTGGGTTGCATTATCTTCATTCCAGAGAAGTGATG
CACAGGGACATTAAGTGTGCCAATATATTGGTGGATGCTAATGGTTCAGTGAAGCTTGCA
GATTTTGGACTGGCTAAGGCGACACAATTGAATAACATCAAGTCTTGCAAAGGAACTGCA
TTCTGGATGGCCCCAGAGGTTGTTAATAGGAAGAGCAATGGATACGGAACTCCTGCTGAT
ATATGGAGTTTGGGTTGCACTGTCTTAGAGATGTTAACTAGACAAATTCCTTATTCTCAC
TTGGAAGGGATGCAAGCACTGTTCAGGATAGGCAGAGGTGAACCTCCTCCTATACCAGAT
ACCTTATCGACAGAAGCTCAGGATTTCATAAAAAGCTGTTTGCGAGTTAATCCGAATGAT
CGGCCAACTGCAGCTGAACTACTAGAACATCCATTTGTTATGAAGCCACCATCAAATTTC
TCAGGTCCTTTAGCACCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400041079
PEP Infomation

pacid=37438657 transcript=PGSC0003DMT400061015 locus=PGSC0003DMG400023742 ID=PGSC0003DMT400061015.v4.03 annot-version=v4.03
Sequence

MYAKQKKLRPRLDRTNALKNVDYDASQSVPSSPSSLRDPPAHRTRSLDLYPVPDRTSFRI
DGSAGEFDTICRSLGLSLEDFAIPVAAWEARKPCSRSDRLRSTRFSDDSRDSDIKLEDAN
ELSDSVRTAARVTVDAESNSRLNNLPENVIEVTISESDVETECSHSDCFGSEDELETADE
VRNGVRGIVGGKLKHLLYSSPENLIKVRVSESEDDNLPTDVKCGIKGFRPPRLAPPATDV
EDFTSAWDFIKSFGPADDEDMVSPLPDESTSDDILVNEQVEEIAKNEERREDFVRNASQV
SESSSEISTDRDNDSSVLRTENDGACEKPFEQGVRDAAESSKSPSDDSYSLISKTSSKSP
TGESDDVISEMSSKSLSGDSYALILKPVHSVSPNGSPSIKSWQKGDFLGSGSFGTVYEGF
TDDGFFFAVKEVSLIDPGNQQSLFQLEQEISLLSRFRHRNIVRYHGTNKDESKLYIFLEL
VTKGSLASVYRKYRLRDSHVSDYTRQILSGLHYLHSREVMHRDIKCANILVDANGSVKLA
DFGLAKATQLNNIKSCKGTAFWMAPEVVNRKSNGYGTPADIWSLGCTVLEMLTRQIPYSH
LEGMQALFRIGRGEPPPIPDTLSTEAQDFIKSCLRVNPNDRPTAAELLEHPFVMKPPSNF
SGPLAP*

Transcript Sequence

Transcript ID

PGSC0003DMT400061015
Transcript Infomation

pacid=37438657 locus=PGSC0003DMG400023742 ID=PGSC0003DMT400061015.v4.03 annot-version=v4.03
Sequence

ATGTATGCGAAGCAGAAGAAGCTAAGGCCTCGACTTGACCGGACAAATGCCCTAAAAAAC
GTCGATTACGACGCTTCACAGTCGGTTCCGTCTTCGCCGTCGTCGTTAAGAGATCCACCT
GCTCACCGGACTAGGTCGCTTGACCTTTATCCTGTACCCGACCGTACAAGTTTCAGAATC
GACGGTTCTGCTGGTGAATTCGACACTATTTGCCGCTCTCTCGGGCTTTCTCTTGAAGAC
TTTGCGATTCCGGTAGCTGCGTGGGAAGCTAGGAAACCTTGCTCTCGTTCTGACAGGTTG
CGCAGCACCAGGTTTTCTGATGACAGCCGTGACTCTGATATTAAGCTTGAGGACGCGAAT
GAACTGTCTGATAGTGTTAGAACTGCTGCTAGGGTTACAGTTGACGCTGAATCGAACAGC
CGGTTAAATAATTTGCCCGAAAATGTGATTGAGGTGACGATTAGTGAATCGGATGTAGAG
ACTGAATGCTCTCACTCTGACTGTTTCGGCTCCGAGGATGAGCTTGAGACTGCTGATGAG
GTTAGAAATGGTGTTAGGGGTATTGTTGGCGGTAAATTGAAGCACTTATTATATTCATCA
CCTGAAAATTTGATTAAGGTTAGGGTTAGTGAATCAGAGGACGATAATTTGCCAACGGAT
GTGAAGTGTGGAATTAAGGGTTTTAGACCACCAAGGCTGGCTCCTCCAGCGACAGACGTG
GAGGATTTCACATCTGCTTGGGATTTTATCAAAAGTTTTGGTCCTGCCGATGATGAAGAT
ATGGTTTCACCGTTACCTGATGAGAGCACTTCTGATGACATACTTGTAAACGAGCAAGTA
GAAGAGATTGCTAAGAACGAAGAGCGTAGAGAGGATTTTGTAAGAAATGCTTCACAAGTA
TCAGAGTCTTCTTCGGAAATATCCACTGATAGAGATAACGACTCCTCAGTCTTGAGGACA
GAAAATGATGGAGCTTGTGAAAAGCCATTCGAGCAAGGTGTAAGAGATGCTGCTGAAAGT
TCTAAATCACCTAGTGATGATTCCTACAGCCTGATATCAAAGACAAGCTCCAAGTCACCC
ACCGGTGAATCCGATGACGTTATCTCGGAGATGAGCTCTAAGTCACTGAGTGGTGATTCA
TATGCATTGATTTTGAAGCCTGTACATTCTGTTTCTCCAAATGGTTCCCCCAGTATAAAA
TCTTGGCAGAAGGGCGACTTTCTTGGGAGTGGGTCATTTGGAACAGTGTATGAAGGCTTT
ACCGATGATGGATTCTTTTTTGCCGTCAAAGAAGTTTCGTTGATTGACCCAGGAAACCAA
CAAAGCCTTTTTCAACTTGAACAGGAGATTTCTCTTCTAAGTCGTTTTCGACATAGAAAT
ATAGTTCGCTATCATGGCACAAACAAGGACGAGAGCAAACTGTATATCTTTCTTGAGCTT
GTTACAAAAGGTTCACTTGCTAGTGTCTATCGCAAGTATCGCTTGCGTGATTCCCATGTT
TCAGATTACACCAGGCAAATCTTGAGTGGGTTGCATTATCTTCATTCCAGAGAAGTGATG
CACAGGGACATTAAGTGTGCCAATATATTGGTGGATGCTAATGGTTCAGTGAAGCTTGCA
GATTTTGGACTGGCTAAGGCGACACAATTGAATAACATCAAGTCTTGCAAAGGAACTGCA
TTCTGGATGGCCCCAGAGGTTGTTAATAGGAAGAGCAATGGATACGGAACTCCTGCTGAT
ATATGGAGTTTGGGTTGCACTGTCTTAGAGATGTTAACTAGACAAATTCCTTATTCTCAC
TTGGAAGGGATGCAAGCACTGTTCAGGATAGGCAGAGGTGAACCTCCTCCTATACCAGAT
ACCTTATCGACAGAAGCTCAGGATTTCATAAAAAGCTGTTTGCGAGTTAATCCGAATGAT
CGGCCAACTGCAGCTGAACTACTAGAACATCCATTTGTTATGAAGCCACCATCAAATTTC
TCAGGTCCTTTAGCACCATAA