Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060999
CDS Infomation

pacid=37480380 polypeptide=PGSC0003DMP400041065 locus=PGSC0003DMG400023730 ID=PGSC0003DMT400060999.v4.03 annot-version=v4.03
Sequence

ATGGCGGAACTGAGGCAGAGAGCGGCGGTGGAGATGGAGGCAACGATTGATTCAATCAGT
GACGACCTTCTCCATAACATCCTCTCTCGTCTTCCAGCCTTAGCCTGTGCAAACGCCGCT
TGTGTTAACCGCTCATGGAACCTCATTATCACTAACCTCCTCTCTCTCCCTAACCTCTCG
TCTGCTCTATCTATCAATCCTTCTCTCCAGGATGCTGTAAATGAGGCTGTTGAGAAGGTT
TTATCGAAACCTGTTCGACCTCAGTTTGCCATTGCTTCCATTGGTCCTACTTTTAGCTTG
CAACAAGCTCACCAGCTCGTAACTGGAAAATTAGGGTCCAAAATTCCAATTATTACTCTG
ATATCTCAAGGAATTTTCGGTCGCAATGCTGTTGATGATGAATTTGAAGAGGTTCAATGG
CAATTTATTGAGAATGAAGAGGCTCATCCTGATCATGGGAATGAGAACCATGGAGTTTTA
CTTACAGTTGGTTTCTTTCCAGGATTGAAAGTCAGTTTGATCCCATTGTTATCGAAAACT
CAGGGACCTCAAGCACTCATGATTGATGAACTTGTGCGAAATATCAGGGAATGCTCGTCC
TCTGTTTCTGGTTCCGCATCACCGGTGGCTATTCTGTTATTTTCTGATCACGAAACTGAC
ATGAAACCGGTTCTTCAAAAGTTGGATTATGCCTTTTGCCCAGAGACTGTAATTGTGGGT
GAAGGAGGTTCACAGTTCTTATACCAAGGGGAAGCTGCAGTAAACCATTGTAATGACGCA
GAATACAGTTCCGCTGCTGTTGCTCTTTCCTTTCTTAGGGATACTGGCAATCCTCCTGGT
ATAGGGGAAACCCAATTTCATGTAGTGCTAGCCCCTGGCATTGCCCAAATTGGGCCTACC
TACAAGGCTGTTGCGGTCAAGGAGAGACCTAGAGACTTTTCTACTTGGCTCACGGCGAAA
AGAGAAGCACAAGTTGAAAGTCTTGATGGTCTGTCTATGTTAGATCAGATCTATGATGAG
TTTGGAGGTGATCTTTATTGTTCTGCTCTCTATATTGGAGTTTCTAAAAGAAGAAAGTGC
TCAATTGGGAAGGAAAGAGCAAGTTGGATATATTTGCAGGAATTCCATGAGGTTTTAAGA
GGGGATGAGGAGTATCTGTATGTTAACGGTGTTGGAATCAGAAGTGGAGACTCCTTCCAA
TTCTACCTTGCGAATGCTAATGCTACACGTGATTCTTGCAACAATGCATCAAACAACTTA
ACATGTTTGAAGCGAGATCTCGACCACCAAAATTCTGGTCGTTCTACTAGTAACAATGTA
AATAGCAAGAAGAAGTCAGTTTTTGGTTGTATCATGTTCTCTTGCTGTGGTCGTGGCAAG
TTTTTTCTTCAGCCTATCCTTGATTGCTCACCGTTCATGGAGAACTTCCCTGAGATTACT
TTTTCTGGAACTTTTTCTGCTGCAGAAATTGCACGTGGGGATTTAAGCCCATATGGACCG
GTGTCTGAAGAACACAGCTCTCTACGCTGCTGTTTGCATGTGTATAGCACTGTCTACCTG
ATTATGTCATACACCCCTGCATCGCCATCGACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400041065
PEP Infomation

pacid=37480380 transcript=PGSC0003DMT400060999 locus=PGSC0003DMG400023730 ID=PGSC0003DMT400060999.v4.03 annot-version=v4.03
Sequence

MAELRQRAAVEMEATIDSISDDLLHNILSRLPALACANAACVNRSWNLIITNLLSLPNLS
SALSINPSLQDAVNEAVEKVLSKPVRPQFAIASIGPTFSLQQAHQLVTGKLGSKIPIITL
ISQGIFGRNAVDDEFEEVQWQFIENEEAHPDHGNENHGVLLTVGFFPGLKVSLIPLLSKT
QGPQALMIDELVRNIRECSSSVSGSASPVAILLFSDHETDMKPVLQKLDYAFCPETVIVG
EGGSQFLYQGEAAVNHCNDAEYSSAAVALSFLRDTGNPPGIGETQFHVVLAPGIAQIGPT
YKAVAVKERPRDFSTWLTAKREAQVESLDGLSMLDQIYDEFGGDLYCSALYIGVSKRRKC
SIGKERASWIYLQEFHEVLRGDEEYLYVNGVGIRSGDSFQFYLANANATRDSCNNASNNL
TCLKRDLDHQNSGRSTSNNVNSKKKSVFGCIMFSCCGRGKFFLQPILDCSPFMENFPEIT
FSGTFSAAEIARGDLSPYGPVSEEHSSLRCCLHVYSTVYLIMSYTPASPST*

Transcript Sequence

Transcript ID

PGSC0003DMT400060999
Transcript Infomation

pacid=37480380 locus=PGSC0003DMG400023730 ID=PGSC0003DMT400060999.v4.03 annot-version=v4.03
Sequence

ATGGCGGAACTGAGGCAGAGAGCGGCGGTGGAGATGGAGGCAACGATTGATTCAATCAGT
GACGACCTTCTCCATAACATCCTCTCTCGTCTTCCAGCCTTAGCCTGTGCAAACGCCGCT
TGTGTTAACCGCTCATGGAACCTCATTATCACTAACCTCCTCTCTCTCCCTAACCTCTCG
TCTGCTCTATCTATCAATCCTTCTCTCCAGGATGCTGTAAATGAGGCTGTTGAGAAGGTT
TTATCGAAACCTGTTCGACCTCAGTTTGCCATTGCTTCCATTGGTCCTACTTTTAGCTTG
CAACAAGCTCACCAGCTCGTAACTGGAAAATTAGGGTCCAAAATTCCAATTATTACTCTG
ATATCTCAAGGAATTTTCGGTCGCAATGCTGTTGATGATGAATTTGAAGAGGTTCAATGG
CAATTTATTGAGAATGAAGAGGCTCATCCTGATCATGGGAATGAGAACCATGGAGTTTTA
CTTACAGTTGGTTTCTTTCCAGGATTGAAAGTCAGTTTGATCCCATTGTTATCGAAAACT
CAGGGACCTCAAGCACTCATGATTGATGAACTTGTGCGAAATATCAGGGAATGCTCGTCC
TCTGTTTCTGGTTCCGCATCACCGGTGGCTATTCTGTTATTTTCTGATCACGAAACTGAC
ATGAAACCGGTTCTTCAAAAGTTGGATTATGCCTTTTGCCCAGAGACTGTAATTGTGGGT
GAAGGAGGTTCACAGTTCTTATACCAAGGGGAAGCTGCAGTAAACCATTGTAATGACGCA
GAATACAGTTCCGCTGCTGTTGCTCTTTCCTTTCTTAGGGATACTGGCAATCCTCCTGGT
ATAGGGGAAACCCAATTTCATGTAGTGCTAGCCCCTGGCATTGCCCAAATTGGGCCTACC
TACAAGGCTGTTGCGGTCAAGGAGAGACCTAGAGACTTTTCTACTTGGCTCACGGCGAAA
AGAGAAGCACAAGTTGAAAGTCTTGATGGTCTGTCTATGTTAGATCAGATCTATGATGAG
TTTGGAGGTGATCTTTATTGTTCTGCTCTCTATATTGGAGTTTCTAAAAGAAGAAAGTGC
TCAATTGGGAAGGAAAGAGCAAGTTGGATATATTTGCAGGAATTCCATGAGGTTTTAAGA
GGGGATGAGGAGTATCTGTATGTTAACGGTGTTGGAATCAGAAGTGGAGACTCCTTCCAA
TTCTACCTTGCGAATGCTAATGCTACACGTGATTCTTGCAACAATGCATCAAACAACTTA
ACATGTTTGAAGCGAGATCTCGACCACCAAAATTCTGGTCGTTCTACTAGTAACAATGTA
AATAGCAAGAAGAAGTCAGTTTTTGGTTGTATCATGTTCTCTTGCTGTGGTCGTGGCAAG
TTTTTTCTTCAGCCTATCCTTGATTGCTCACCGTTCATGGAGAACTTCCCTGAGATTACT
TTTTCTGGAACTTTTTCTGCTGCAGAAATTGCACGTGGGGATTTAAGCCCATATGGACCG
GTGTCTGAAGAACACAGCTCTCTACGCTGCTGTTTGCATGTGTATAGCACTGTCTACCTG
ATTATGTCATACACCCCTGCATCGCCATCGACATGA