Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060939
CDS Infomation

pacid=37476684 polypeptide=PGSC0003DMP400041015 locus=PGSC0003DMG400023702 ID=PGSC0003DMT400060939.v4.03 annot-version=v4.03
Sequence

ATGGGAATAACATATTCATGTCCTTTCGCAAATTTTGACGATTCAGATACTAAATTCGAG
TCTTATCTAGTGAGAACACTGAGTTTTGGAACTGATGCTACGAAGAATGCTTTACCGCCT
ATTAATTTCAATGACCAAAATCCTCAACAACCAAAAATGCAGAAGTCTTACAGTTCTGGA
AAGATGATTCTTGAGGGAACTCTTAGCTATAAAAGGAGGGAATTAGAGGCCAGGATTGGA
CTGACTTCATTTGATAACGATGAGAAGACGATGAGTCGATCAGACAGCCTTATGAGCAGT
GAAGAAAAGCATAACATGCCTGATGAAAACACTAAAATGATACCATTGGTATGTGAGAAA
CAAAGAGATGAGGCTGCAGTGAAGTTGCAGAAAACATACAAAAGTTTTCGTACTAGAAGA
CGACTAGCAGATTGTGCTATTCTGGTTGAGCAGAGATGGTGGAAGGTATTAGATTCCGTT
GAACTCAAGCATAGCTCGATATCATTCTTTGACATTGAGAAACCCCAAACCGCCTTTTCT
CGTTGGTCAAGAGCTTTAACAAGAGCTGCTAAGGTCGGTAAAGGTCTGTCGAAAGATGAA
AAAGCATGTAAACTTGCTTTACAGCATTGGCTTGAAGCAATCGATCCTAGACATCGCTAT
GGTCATAATCTTCATTTTTATTACACCAAGTGGCTCCAAGTTGACAGTAAACAACCCTTC
TTCTATTGGTTGGACATAGGTGAAGGTAAAGAGGTAAATCTTGAGAAGTGCCCTAGATCA
AAACTTCATCAACAATGCATCAAGTATCTTGGTCCGGTAGAGAGGGAGGCATATGAAGTT
GTAATTGTGGGTGGAAAATTCATCTACAAGCAAAGCGGGAGGGTTCTTGATACGAGGGGA
GGATCAGAAGAAGCCAAGTGGATCTTTGTGCTAAGCGTGTCGAAGGACTTATACATTGGG
ATGAAGCAAAAAGGCACATTTCAGCATTCAAGTTTCTTAGCTGGTGGAGCTACATTATCT
GCAGGCAGATTAGTGATAGAAGATGGTATTCTAAAGGCTGTCTGGCCACACAGCGGACAT
TATCTTCCAACAAGGGAGAATTTCGAAGAATTTATGACATTTCTTGAACAACACAACATT
GATGTCACTATTATTCAGAAATCCCCGTGTGATGGGGAGGAAGCAACCTTTTGTAGGAAG
GAAGGTGGTTTAGGCCTTCGTAACAGCTTATCCGCACCAGATTTTAGCCAAGCCATTGAA
GAGAGCAACGCCAAATGCTCAGACCGGGAGAAGACTAATCCTACTACAAAATATTGCAAG
GATACAGAAAATCCAATTCCGTTGTCAAGACGATCCCAAGGATCAAAACCCAAAATGGTA
GTCGAAATACCACCAAGGGAAGACACATTTGAGTTATTCACTAAGTCCGTCCAGTCGGGA
GACAACATACAGCCTTTGGATACTCCAATAGATGGATATGAAACAGCAGAGGAATATTTA
TCAGATACAGAACTATCAGTTTCAAAGCTGAATTTATTCGACGATGAAGATGAAGAAGAC
TATGAAGAAACTATCCCTACAGAAAAGATAATGAAGAGAATAGATACACATAGAAGAACA
AAGTCATTCCAGTTAGCTCATCAATTATCTTGTAGATGGACAACAGGAGCTGGACCTCGA
ATCGGATGTATGAGGGACTATCCAGCAGAACTCCAAGTTCGTGTTATGGAGGACGTGTGT
TTGTCTCCAAGAGCTACTACATTTCAAACTCCACCAAAATATGCTAGACCTCCTAGCATC
TTTTCTATCGAAGCAACTGAAGACAGAAGGCGTACTGGTTCTGAATCATCGGTATTCTTT
CAATCAACTCCACCAGTAGAAGAAATGCAAAAATATTGTGGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400041015
PEP Infomation

pacid=37476684 transcript=PGSC0003DMT400060939 locus=PGSC0003DMG400023702 ID=PGSC0003DMT400060939.v4.03 annot-version=v4.03
Sequence

MGITYSCPFANFDDSDTKFESYLVRTLSFGTDATKNALPPINFNDQNPQQPKMQKSYSSG
KMILEGTLSYKRRELEARIGLTSFDNDEKTMSRSDSLMSSEEKHNMPDENTKMIPLVCEK
QRDEAAVKLQKTYKSFRTRRRLADCAILVEQRWWKVLDSVELKHSSISFFDIEKPQTAFS
RWSRALTRAAKVGKGLSKDEKACKLALQHWLEAIDPRHRYGHNLHFYYTKWLQVDSKQPF
FYWLDIGEGKEVNLEKCPRSKLHQQCIKYLGPVEREAYEVVIVGGKFIYKQSGRVLDTRG
GSEEAKWIFVLSVSKDLYIGMKQKGTFQHSSFLAGGATLSAGRLVIEDGILKAVWPHSGH
YLPTRENFEEFMTFLEQHNIDVTIIQKSPCDGEEATFCRKEGGLGLRNSLSAPDFSQAIE
ESNAKCSDREKTNPTTKYCKDTENPIPLSRRSQGSKPKMVVEIPPREDTFELFTKSVQSG
DNIQPLDTPIDGYETAEEYLSDTELSVSKLNLFDDEDEEDYEETIPTEKIMKRIDTHRRT
KSFQLAHQLSCRWTTGAGPRIGCMRDYPAELQVRVMEDVCLSPRATTFQTPPKYARPPSI
FSIEATEDRRRTGSESSVFFQSTPPVEEMQKYCG*

Transcript Sequence

Transcript ID

PGSC0003DMT400060939
Transcript Infomation

pacid=37476684 locus=PGSC0003DMG400023702 ID=PGSC0003DMT400060939.v4.03 annot-version=v4.03
Sequence

ATGGGAATAACATATTCATGTCCTTTCGCAAATTTTGACGATTCAGATACTAAATTCGAG
TCTTATCTAGTGAGAACACTGAGTTTTGGAACTGATGCTACGAAGAATGCTTTACCGCCT
ATTAATTTCAATGACCAAAATCCTCAACAACCAAAAATGCAGAAGTCTTACAGTTCTGGA
AAGATGATTCTTGAGGGAACTCTTAGCTATAAAAGGAGGGAATTAGAGGCCAGGATTGGA
CTGACTTCATTTGATAACGATGAGAAGACGATGAGTCGATCAGACAGCCTTATGAGCAGT
GAAGAAAAGCATAACATGCCTGATGAAAACACTAAAATGATACCATTGGTATGTGAGAAA
CAAAGAGATGAGGCTGCAGTGAAGTTGCAGAAAACATACAAAAGTTTTCGTACTAGAAGA
CGACTAGCAGATTGTGCTATTCTGGTTGAGCAGAGATGGTGGAAGGTATTAGATTCCGTT
GAACTCAAGCATAGCTCGATATCATTCTTTGACATTGAGAAACCCCAAACCGCCTTTTCT
CGTTGGTCAAGAGCTTTAACAAGAGCTGCTAAGGTCGGTAAAGGTCTGTCGAAAGATGAA
AAAGCATGTAAACTTGCTTTACAGCATTGGCTTGAAGCAATCGATCCTAGACATCGCTAT
GGTCATAATCTTCATTTTTATTACACCAAGTGGCTCCAAGTTGACAGTAAACAACCCTTC
TTCTATTGGTTGGACATAGGTGAAGGTAAAGAGGTAAATCTTGAGAAGTGCCCTAGATCA
AAACTTCATCAACAATGCATCAAGTATCTTGGTCCGGTAGAGAGGGAGGCATATGAAGTT
GTAATTGTGGGTGGAAAATTCATCTACAAGCAAAGCGGGAGGGTTCTTGATACGAGGGGA
GGATCAGAAGAAGCCAAGTGGATCTTTGTGCTAAGCGTGTCGAAGGACTTATACATTGGG
ATGAAGCAAAAAGGCACATTTCAGCATTCAAGTTTCTTAGCTGGTGGAGCTACATTATCT
GCAGGCAGATTAGTGATAGAAGATGGTATTCTAAAGGCTGTCTGGCCACACAGCGGACAT
TATCTTCCAACAAGGGAGAATTTCGAAGAATTTATGACATTTCTTGAACAACACAACATT
GATGTCACTATTATTCAGAAATCCCCGTGTGATGGGGAGGAAGCAACCTTTTGTAGGAAG
GAAGGTGGTTTAGGCCTTCGTAACAGCTTATCCGCACCAGATTTTAGCCAAGCCATTGAA
GAGAGCAACGCCAAATGCTCAGACCGGGAGAAGACTAATCCTACTACAAAATATTGCAAG
GATACAGAAAATCCAATTCCGTTGTCAAGACGATCCCAAGGATCAAAACCCAAAATGGTA
GTCGAAATACCACCAAGGGAAGACACATTTGAGTTATTCACTAAGTCCGTCCAGTCGGGA
GACAACATACAGCCTTTGGATACTCCAATAGATGGATATGAAACAGCAGAGGAATATTTA
TCAGATACAGAACTATCAGTTTCAAAGCTGAATTTATTCGACGATGAAGATGAAGAAGAC
TATGAAGAAACTATCCCTACAGAAAAGATAATGAAGAGAATAGATACACATAGAAGAACA
AAGTCATTCCAGTTAGCTCATCAATTATCTTGTAGATGGACAACAGGAGCTGGACCTCGA
ATCGGATGTATGAGGGACTATCCAGCAGAACTCCAAGTTCGTGTTATGGAGGACGTGTGT
TTGTCTCCAAGAGCTACTACATTTCAAACTCCACCAAAATATGCTAGACCTCCTAGCATC
TTTTCTATCGAAGCAACTGAAGACAGAAGGCGTACTGGTTCTGAATCATCGGTATTCTTT
CAATCAACTCCACCAGTAGAAGAAATGCAAAAATATTGTGGCTAG