Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060901
CDS Infomation

pacid=37480198 polypeptide=PGSC0003DMP400040985 locus=PGSC0003DMG400023689 ID=PGSC0003DMT400060901.v4.03 annot-version=v4.03
Sequence

ATGTCTAACTCTGTTAAAGCCTTAGAACCTGCATTTCAGGGTGCGGGTCAGAGAATAGGG
ACCGAAATTTGGAGAATTGAGGATTTCCAACCAGTTCCATTGCCAAAGTCAGAATGTGGT
AAATTCTACTCGGGTGATTCTTACATCATCTTGCAGACAACTTCTGGCAAGGGAGGTTCT
TATATATATGATATACACTTCTGGCTTGGAAAGGATACTAGTCAGGATGAAGCTGGAACT
GCAGCTATCAAAACTGTTGAGCTTGATGCGATTCTTGGAGGGCGAGCAGTACAGCATAGG
GAAATCCAAGGTCATGAATCGGACAAATTTTTATCATTCTTTAAGCCATGCATTATACCA
TTGGAAGGTGGTATTGCATCTGGATTCAAGAAACCAGAAGAGGAAGAATTTGAAACAAGG
TTGTATGTCTGCAAGGGCAAACGAGTTGTCAGGATGAAGCAGGTCCCATTTTCCCGGTCC
TCTCTAAATCATGATGATGTGTTCATTCTGGACTCTAAAGACAAGATATATCAGTTCAAT
GGTGCAAATTCCAATATCCAGGAGAGGGCCAAAGCATTAGAAGTTATTCAGTTCTTGAAG
GACAAGTATCACGAGGGGACATGTGATGTTGTAATTGTTGATGATGGGAATTTACAAGCT
GAGACGGATTCCGGTTCCTTCTGGGTGCTCTTTGGTGGCTTTGCTCCAATTGGCAAAAAG
GTTGCTAGTGAAGATGATATTGTTCCAGAGAAGACACCTGCTAAACTTTATAGCATTACT
GATGGTCAAGTCAGTCCTGTGGACGGTGAACTTTCAAAATCCAGCTTAGAAAACAATAAA
TGCTATCTTTTGGATTGTGGTGCTGAGGTATTTGTTTGGGTTGGCCGTGTAACTCAACTG
GAAGAGAGGAAAGCTGCCACTCAAGCTGCAGAGGAATTTCTTTCCAGTCAAAATAGACCC
AAGTCAACACATGTAACCCGACTTATTCAAGGCTATGAAACATATTCATTCAAGTCCAAC
TTTGACTCTTGGCCATCAGGGTCTGCACCGGCTGCTGAGGAGGGAAGAGGAAAAGTAGCA
GCTTTGCTGAAGCAACAAGGGATTGGTGTTAAAGGTGCTAGCAAAAGTGCTCCTGTAAAC
GAGGAAGTCCCTCCGTTGCTTGAAGGGGGTGGAAAAATAGAGGTTTGGCGTATCAATGGT
AATGCAAAGACCCCAGTCACCGGAGATGATATTGGTAAATTTCACTGTGGAGATTGCTAT
ATCGTTCTTTACACATACCACCACAGTGACAGGAAAGAAGATTATTATCTATGCTGGTGG
ATTGGAAAGGATAGCGTTGAGGAGGACCAAAACATGGCTGCTAAATTGGCTAGTACAATG
TGCAATTCACTTAAAGGGAGACCAGTGCTGGGTCGCATATATCAAGGGAAAGAACCACCA
CAATTTGTTGCAATCTTCCAGCCCTTGTTGGTCCTTAAGGGTGGATTAAGCTCTGGCTAT
AAAATTTATATTGCTGACAAAGGCCTGAATGATGAAACCTACACTGCTGATTCCGTGGCA
CTTATTCAAGTATCTGGAACTTCTGTGCATAACAACAAAGCAGTTCAAGTTGATGCTGTG
GCAGCTTCACTGAACTCTAATGAGTGTTTTCTTCTGCAATCTGGCTCATCAGTATTTAGT
TGGCATGGAAACCAGAGTACCTATGAGCAGCAGCAATTAGCAGCAACACTTGCAGAATTC
TTGAAGCCTGGAGTGACTGTGAAACACACTAAAGAAGGAACAGAGAGCTCATCTTTCTGG
TTTGCTGTGGGAGGAAAACAAAGTTACACCAGCAAAAAAGTAGCCCCAGAGGTCACCAGA
GACCCCCACTTGTTTGTGTATTCCATTAATAAAGGTGTATCCCTGATCTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400040985
PEP Infomation

pacid=37480198 transcript=PGSC0003DMT400060901 locus=PGSC0003DMG400023689 ID=PGSC0003DMT400060901.v4.03 annot-version=v4.03
Sequence

MSNSVKALEPAFQGAGQRIGTEIWRIEDFQPVPLPKSECGKFYSGDSYIILQTTSGKGGS
YIYDIHFWLGKDTSQDEAGTAAIKTVELDAILGGRAVQHREIQGHESDKFLSFFKPCIIP
LEGGIASGFKKPEEEEFETRLYVCKGKRVVRMKQVPFSRSSLNHDDVFILDSKDKIYQFN
GANSNIQERAKALEVIQFLKDKYHEGTCDVVIVDDGNLQAETDSGSFWVLFGGFAPIGKK
VASEDDIVPEKTPAKLYSITDGQVSPVDGELSKSSLENNKCYLLDCGAEVFVWVGRVTQL
EERKAATQAAEEFLSSQNRPKSTHVTRLIQGYETYSFKSNFDSWPSGSAPAAEEGRGKVA
ALLKQQGIGVKGASKSAPVNEEVPPLLEGGGKIEVWRINGNAKTPVTGDDIGKFHCGDCY
IVLYTYHHSDRKEDYYLCWWIGKDSVEEDQNMAAKLASTMCNSLKGRPVLGRIYQGKEPP
QFVAIFQPLLVLKGGLSSGYKIYIADKGLNDETYTADSVALIQVSGTSVHNNKAVQVDAV
AASLNSNECFLLQSGSSVFSWHGNQSTYEQQQLAATLAEFLKPGVTVKHTKEGTESSSFW
FAVGGKQSYTSKKVAPEVTRDPHLFVYSINKGVSLIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400060901
Transcript Infomation

pacid=37480198 locus=PGSC0003DMG400023689 ID=PGSC0003DMT400060901.v4.03 annot-version=v4.03
Sequence

ATGTCTAACTCTGTTAAAGCCTTAGAACCTGCATTTCAGGGTGCGGGTCAGAGAATAGGG
ACCGAAATTTGGAGAATTGAGGATTTCCAACCAGTTCCATTGCCAAAGTCAGAATGTGGT
AAATTCTACTCGGGTGATTCTTACATCATCTTGCAGACAACTTCTGGCAAGGGAGGTTCT
TATATATATGATATACACTTCTGGCTTGGAAAGGATACTAGTCAGGATGAAGCTGGAACT
GCAGCTATCAAAACTGTTGAGCTTGATGCGATTCTTGGAGGGCGAGCAGTACAGCATAGG
GAAATCCAAGGTCATGAATCGGACAAATTTTTATCATTCTTTAAGCCATGCATTATACCA
TTGGAAGGTGGTATTGCATCTGGATTCAAGAAACCAGAAGAGGAAGAATTTGAAACAAGG
TTGTATGTCTGCAAGGGCAAACGAGTTGTCAGGATGAAGCAGGTCCCATTTTCCCGGTCC
TCTCTAAATCATGATGATGTGTTCATTCTGGACTCTAAAGACAAGATATATCAGTTCAAT
GGTGCAAATTCCAATATCCAGGAGAGGGCCAAAGCATTAGAAGTTATTCAGTTCTTGAAG
GACAAGTATCACGAGGGGACATGTGATGTTGTAATTGTTGATGATGGGAATTTACAAGCT
GAGACGGATTCCGGTTCCTTCTGGGTGCTCTTTGGTGGCTTTGCTCCAATTGGCAAAAAG
GTTGCTAGTGAAGATGATATTGTTCCAGAGAAGACACCTGCTAAACTTTATAGCATTACT
GATGGTCAAGTCAGTCCTGTGGACGGTGAACTTTCAAAATCCAGCTTAGAAAACAATAAA
TGCTATCTTTTGGATTGTGGTGCTGAGGTATTTGTTTGGGTTGGCCGTGTAACTCAACTG
GAAGAGAGGAAAGCTGCCACTCAAGCTGCAGAGGAATTTCTTTCCAGTCAAAATAGACCC
AAGTCAACACATGTAACCCGACTTATTCAAGGCTATGAAACATATTCATTCAAGTCCAAC
TTTGACTCTTGGCCATCAGGGTCTGCACCGGCTGCTGAGGAGGGAAGAGGAAAAGTAGCA
GCTTTGCTGAAGCAACAAGGGATTGGTGTTAAAGGTGCTAGCAAAAGTGCTCCTGTAAAC
GAGGAAGTCCCTCCGTTGCTTGAAGGGGGTGGAAAAATAGAGGTTTGGCGTATCAATGGT
AATGCAAAGACCCCAGTCACCGGAGATGATATTGGTAAATTTCACTGTGGAGATTGCTAT
ATCGTTCTTTACACATACCACCACAGTGACAGGAAAGAAGATTATTATCTATGCTGGTGG
ATTGGAAAGGATAGCGTTGAGGAGGACCAAAACATGGCTGCTAAATTGGCTAGTACAATG
TGCAATTCACTTAAAGGGAGACCAGTGCTGGGTCGCATATATCAAGGGAAAGAACCACCA
CAATTTGTTGCAATCTTCCAGCCCTTGTTGGTCCTTAAGGGTGGATTAAGCTCTGGCTAT
AAAATTTATATTGCTGACAAAGGCCTGAATGATGAAACCTACACTGCTGATTCCGTGGCA
CTTATTCAAGTATCTGGAACTTCTGTGCATAACAACAAAGCAGTTCAAGTTGATGCTGTG
GCAGCTTCACTGAACTCTAATGAGTGTTTTCTTCTGCAATCTGGCTCATCAGTATTTAGT
TGGCATGGAAACCAGAGTACCTATGAGCAGCAGCAATTAGCAGCAACACTTGCAGAATTC
TTGAAGCCTGGAGTGACTGTGAAACACACTAAAGAAGGAACAGAGAGCTCATCTTTCTGG
TTTGCTGTGGGAGGAAAACAAAGTTACACCAGCAAAAAAGTAGCCCCAGAGGTCACCAGA
GACCCCCACTTGTTTGTGTATTCCATTAATAAAGGTGTATCCCTGATCTCTTAA