Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060895
CDS Infomation

pacid=37478075 polypeptide=PGSC0003DMP400040980 locus=PGSC0003DMG400023687 ID=PGSC0003DMT400060895.v4.03 annot-version=v4.03
Sequence

ATGCTCTCTCGTTTCATCTCCAAATCCTCACATCTCCGGCTGTTAACCCTAATTTCCCCC
AAAACCCACTTCATAAACCCTAAACCCATTTCCCCTAAACCATATTTGTTCCCCCATTTC
TTCTCCACGCGTAACAACAACAACAACAATAACAACAGTAATGGCAGAAATTCGGATCCT
GATTTCTGGAAACTCTCTTCTGAAACCGAGCAATCAGTGTTCAATGAAGACTCAGAAAGT
GTCGAGGGAATAGGAAAGGATGATGTGAGTTGGGCTAATGGAGAAGAAGAGAGTGGTGAT
GTGTTTAAGGAAGCTGGTGAAGTGAAGGGTGGTGTTGGTGGTGGGGAGGAGATTTGGGCT
ACTGCTGAAGGGTATAAACCTTGGAGTTTTGATGCGGAAGGGGAAGGAGAACGAGTGTTT
GATATTGGAGAAGATGTTAAGGTAGAAAGTGAAATGAGGGGTTCTGAAGAGGAGGATAAA
AGACAGAGTGCTGAGGAGAAAAAGCTGCTTGAATTGGAAGAGCAAGTTCTTACTGGGGTT
CTTAAAGGTCCTAATCGTGCATTTGGGGATCTAATAGCAGCATCTGGAATCACGGACGAA
ATGATGGACAGTTTGCTTGCGCTGAAGGACCTGGATGGCATTAAAGGACTTCCTCCTTTA
AGTGAAATCGAAGATATGCGTTATGAAAAGAATACTAGGAAGTCAACCAGAGGTGACATA
GAGCGCCAAAAGCAAGAGGAAGTAGCCAAGGCGCGAGTCAAACAAGTAGATGAAAAAGGA
AGGGCTTATGGGACAGGAAGGAGGAAGTGTAGTATAGCCCGTGTTTGGGTTGAACCAGGT
GGTGGGAAATTTATGGTGAATGACAAAGAGTTTGACGTATACTTCCCAATGCTTGATCAC
CGGGCTGTTCTTCTTCGACCTTTTACTGAAACTAAGACATTGGGCATGTGGGATGTGAGA
TGTACTGTAAAAGGAGGGGGTGTGTCAGGTCAAGTTGGTGCAATTCAGCTGGGCATCAGC
AGGGCATTACAGAATTGGGACCCAGAGTTGCGACCTCCCCTCAGAGAAGGTGGCTACTTG
ACGAGAGACTCGAGAGTTGTGGAGAGGAAAAAACCTGGTAAAGCAAAAGCAAGAAAGAGC
TACCAATGGGTCAAGCGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400040980
PEP Infomation

pacid=37478075 transcript=PGSC0003DMT400060895 locus=PGSC0003DMG400023687 ID=PGSC0003DMT400060895.v4.03 annot-version=v4.03
Sequence

MLSRFISKSSHLRLLTLISPKTHFINPKPISPKPYLFPHFFSTRNNNNNNNNSNGRNSDP
DFWKLSSETEQSVFNEDSESVEGIGKDDVSWANGEEESGDVFKEAGEVKGGVGGGEEIWA
TAEGYKPWSFDAEGEGERVFDIGEDVKVESEMRGSEEEDKRQSAEEKKLLELEEQVLTGV
LKGPNRAFGDLIAASGITDEMMDSLLALKDLDGIKGLPPLSEIEDMRYEKNTRKSTRGDI
ERQKQEEVAKARVKQVDEKGRAYGTGRRKCSIARVWVEPGGGKFMVNDKEFDVYFPMLDH
RAVLLRPFTETKTLGMWDVRCTVKGGGVSGQVGAIQLGISRALQNWDPELRPPLREGGYL
TRDSRVVERKKPGKAKARKSYQWVKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400060895
Transcript Infomation

pacid=37478075 locus=PGSC0003DMG400023687 ID=PGSC0003DMT400060895.v4.03 annot-version=v4.03
Sequence

ATGCTCTCTCGTTTCATCTCCAAATCCTCACATCTCCGGCTGTTAACCCTAATTTCCCCC
AAAACCCACTTCATAAACCCTAAACCCATTTCCCCTAAACCATATTTGTTCCCCCATTTC
TTCTCCACGCGTAACAACAACAACAACAATAACAACAGTAATGGCAGAAATTCGGATCCT
GATTTCTGGAAACTCTCTTCTGAAACCGAGCAATCAGTGTTCAATGAAGACTCAGAAAGT
GTCGAGGGAATAGGAAAGGATGATGTGAGTTGGGCTAATGGAGAAGAAGAGAGTGGTGAT
GTGTTTAAGGAAGCTGGTGAAGTGAAGGGTGGTGTTGGTGGTGGGGAGGAGATTTGGGCT
ACTGCTGAAGGGTATAAACCTTGGAGTTTTGATGCGGAAGGGGAAGGAGAACGAGTGTTT
GATATTGGAGAAGATGTTAAGGTAGAAAGTGAAATGAGGGGTTCTGAAGAGGAGGATAAA
AGACAGAGTGCTGAGGAGAAAAAGCTGCTTGAATTGGAAGAGCAAGTTCTTACTGGGGTT
CTTAAAGGTCCTAATCGTGCATTTGGGGATCTAATAGCAGCATCTGGAATCACGGACGAA
ATGATGGACAGTTTGCTTGCGCTGAAGGACCTGGATGGCATTAAAGGACTTCCTCCTTTA
AGTGAAATCGAAGATATGCGTTATGAAAAGAATACTAGGAAGTCAACCAGAGGTGACATA
GAGCGCCAAAAGCAAGAGGAAGTAGCCAAGGCGCGAGTCAAACAAGTAGATGAAAAAGGA
AGGGCTTATGGGACAGGAAGGAGGAAGTGTAGTATAGCCCGTGTTTGGGTTGAACCAGGT
GGTGGGAAATTTATGGTGAATGACAAAGAGTTTGACGTATACTTCCCAATGCTTGATCAC
CGGGCTGTTCTTCTTCGACCTTTTACTGAAACTAAGACATTGGGCATGTGGGATGTGAGA
TGTACTGTAAAAGGAGGGGGTGTGTCAGGTCAAGTTGGTGCAATTCAGCTGGGCATCAGC
AGGGCATTACAGAATTGGGACCCAGAGTTGCGACCTCCCCTCAGAGAAGGTGGCTACTTG
ACGAGAGACTCGAGAGTTGTGGAGAGGAAAAAACCTGGTAAAGCAAAAGCAAGAAAGAGC
TACCAATGGGTCAAGCGTTGA