Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060893
CDS Infomation

pacid=37477987 polypeptide=PGSC0003DMP400040978 locus=PGSC0003DMG400023686 ID=PGSC0003DMT400060893.v4.03 annot-version=v4.03
Sequence

ATGGCCAGCTTAATATCACAGAATATTACTCATTCGATAGGGGATGAAAAGTCTAAAAGG
AAGACTAAAGGTGAAGGTAAGGAAGAAAGTGAGAAAAAAATTAATAGGAAGAGAAAGAAA
GAGCACAATGAAGAGAATAAAGAAGTAGAAATCAAGGATAAGAGGGAAATGGAGAAGCTT
GAGAACTTATTGTTTGGATCATTGTATAACCCTGTTGGTTTCGGGAAGGATGATGAAGAT
GAAAAGCGAGATGATGGCGGAAATGAGTCTGCTATGTTCTTTGTGGACCGGGTTGCTGAT
AGTGCATTGTCTGTTTATGAGGGAGATGCACAGCTGGTGCAAGAAGGTATCGTAGAAGTG
GAGAAAGAGCGGAAACCTGTGTGGGTAGATGATGAAGAAGAGAAGGCTAGTATAAAAATA
GCAAGTGTGAACAGATTGAGGAAGCTGAGGAAAGAAGAGGGCGAAGATGTGGTATCTGGT
TCTACGTACGTGGAAAGACTAAGGGCTCAACATGCTAAACTTAATCCAGGCACTGAATGG
GCCCAAATTGATTATCAAAGCAGAAACTACAGTTCTGATGATGAAGATTCTGACGAGGAA
GGTAAACATATTGATGACTATGGTTCCAAGGATGTCAAGTTGGTGGATGATATTCTTCAA
TCAAACGAAGATCTTGTTGTCAAAAGTCGCACGAAATTGTTGCCGGGGCTTCTTGAATAT
TCAAGACTGGTTGATGCTAATGCAGTTGATCCTTCAAATGCACCGATAAATTCTGTTCAG
TTCCACAAGAATTCTCAGTTGCTCCTTGTTGGTGGATTGGATAAAAAACTCAGATTTTTC
CAGATTGACGGGAAACGAAATACGAAGATCCAAAGCATCTTTCTTGAAGACTTTCCAATT
AAAAAGGCTTCTTTCTTACCCAATGGGTCTCAAGTTATTATATCAGGAAGAAGGAAGTTC
TTCCATGTCTTAGACTTGGTCAAAGCAAGTGTAGATAAAGTAGGTCCTCTAGTCGGCAGG
GAAGAAAAGAGCCTGGAAAGTTTTGAGGTATCTCCTGATTCAGATACAATTGCTTTTCTT
GGTAATGAAGGATATATTTTGCTAGTTTCCACCAAAACAAAGGAGCTCATTGGGACACTA
AAAATGAATGGAACTGTCCGCTCAGCGGCATTCTCTGATGACGGACAACAATTACTGAGC
TCTGGTGGAGATGGCCATATTTACCATTGGGATTTGAGGACAAGGACTTGCATTCACAAA
GGTGTTGATGAAGGGTCCATAAATGGTACTGCTCTTTGCACTTCGCCAAATGGAAGTTTG
TTTGCTTCTGGTTCAGACAGTGGGATCGTAAATATTTATAACAAACAAGAGTTTTTAGGG
GGAAAGAGAAGACCAATCAAGGCAATTGAGAATCTGACCACGAAAGTGGATTTTATGAAG
TTTAATCATGATGCTCAAATATTAGCCATCAGTTCTGGCATGAAGAAAAATAGCTCAAAG
CTAATTCACATTCCATCATTTACAGTTTTTTCAAACTGGCCCTCTCCAAATCGGGCTGTC
CACTATCCTCGCTGCTTGGATTTTAGTCCTCACGGAGGATTCATGGCTCTGGGAAATGCT
GCAGGAAAAGTGTTATTGTACAAGTTGCATCATTACCATGATGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400040978
PEP Infomation

pacid=37477987 transcript=PGSC0003DMT400060893 locus=PGSC0003DMG400023686 ID=PGSC0003DMT400060893.v4.03 annot-version=v4.03
Sequence

MASLISQNITHSIGDEKSKRKTKGEGKEESEKKINRKRKKEHNEENKEVEIKDKREMEKL
ENLLFGSLYNPVGFGKDDEDEKRDDGGNESAMFFVDRVADSALSVYEGDAQLVQEGIVEV
EKERKPVWVDDEEEKASIKIASVNRLRKLRKEEGEDVVSGSTYVERLRAQHAKLNPGTEW
AQIDYQSRNYSSDDEDSDEEGKHIDDYGSKDVKLVDDILQSNEDLVVKSRTKLLPGLLEY
SRLVDANAVDPSNAPINSVQFHKNSQLLLVGGLDKKLRFFQIDGKRNTKIQSIFLEDFPI
KKASFLPNGSQVIISGRRKFFHVLDLVKASVDKVGPLVGREEKSLESFEVSPDSDTIAFL
GNEGYILLVSTKTKELIGTLKMNGTVRSAAFSDDGQQLLSSGGDGHIYHWDLRTRTCIHK
GVDEGSINGTALCTSPNGSLFASGSDSGIVNIYNKQEFLGGKRRPIKAIENLTTKVDFMK
FNHDAQILAISSGMKKNSSKLIHIPSFTVFSNWPSPNRAVHYPRCLDFSPHGGFMALGNA
AGKVLLYKLHHYHDA*

Transcript Sequence

Transcript ID

PGSC0003DMT400060893
Transcript Infomation

pacid=37477987 locus=PGSC0003DMG400023686 ID=PGSC0003DMT400060893.v4.03 annot-version=v4.03
Sequence

ATGGCCAGCTTAATATCACAGAATATTACTCATTCGATAGGGGATGAAAAGTCTAAAAGG
AAGACTAAAGGTGAAGGTAAGGAAGAAAGTGAGAAAAAAATTAATAGGAAGAGAAAGAAA
GAGCACAATGAAGAGAATAAAGAAGTAGAAATCAAGGATAAGAGGGAAATGGAGAAGCTT
GAGAACTTATTGTTTGGATCATTGTATAACCCTGTTGGTTTCGGGAAGGATGATGAAGAT
GAAAAGCGAGATGATGGCGGAAATGAGTCTGCTATGTTCTTTGTGGACCGGGTTGCTGAT
AGTGCATTGTCTGTTTATGAGGGAGATGCACAGCTGGTGCAAGAAGGTATCGTAGAAGTG
GAGAAAGAGCGGAAACCTGTGTGGGTAGATGATGAAGAAGAGAAGGCTAGTATAAAAATA
GCAAGTGTGAACAGATTGAGGAAGCTGAGGAAAGAAGAGGGCGAAGATGTGGTATCTGGT
TCTACGTACGTGGAAAGACTAAGGGCTCAACATGCTAAACTTAATCCAGGCACTGAATGG
GCCCAAATTGATTATCAAAGCAGAAACTACAGTTCTGATGATGAAGATTCTGACGAGGAA
GGTAAACATATTGATGACTATGGTTCCAAGGATGTCAAGTTGGTGGATGATATTCTTCAA
TCAAACGAAGATCTTGTTGTCAAAAGTCGCACGAAATTGTTGCCGGGGCTTCTTGAATAT
TCAAGACTGGTTGATGCTAATGCAGTTGATCCTTCAAATGCACCGATAAATTCTGTTCAG
TTCCACAAGAATTCTCAGTTGCTCCTTGTTGGTGGATTGGATAAAAAACTCAGATTTTTC
CAGATTGACGGGAAACGAAATACGAAGATCCAAAGCATCTTTCTTGAAGACTTTCCAATT
AAAAAGGCTTCTTTCTTACCCAATGGGTCTCAAGTTATTATATCAGGAAGAAGGAAGTTC
TTCCATGTCTTAGACTTGGTCAAAGCAAGTGTAGATAAAGTAGGTCCTCTAGTCGGCAGG
GAAGAAAAGAGCCTGGAAAGTTTTGAGGTATCTCCTGATTCAGATACAATTGCTTTTCTT
GGTAATGAAGGATATATTTTGCTAGTTTCCACCAAAACAAAGGAGCTCATTGGGACACTA
AAAATGAATGGAACTGTCCGCTCAGCGGCATTCTCTGATGACGGACAACAATTACTGAGC
TCTGGTGGAGATGGCCATATTTACCATTGGGATTTGAGGACAAGGACTTGCATTCACAAA
GGTGTTGATGAAGGGTCCATAAATGGTACTGCTCTTTGCACTTCGCCAAATGGAAGTTTG
TTTGCTTCTGGTTCAGACAGTGGGATCGTAAATATTTATAACAAACAAGAGTTTTTAGGG
GGAAAGAGAAGACCAATCAAGGCAATTGAGAATCTGACCACGAAAGTGGATTTTATGAAG
TTTAATCATGATGCTCAAATATTAGCCATCAGTTCTGGCATGAAGAAAAATAGCTCAAAG
CTAATTCACATTCCATCATTTACAGTTTTTTCAAACTGGCCCTCTCCAAATCGGGCTGTC
CACTATCCTCGCTGCTTGGATTTTAGTCCTCACGGAGGATTCATGGCTCTGGGAAATGCT
GCAGGAAAAGTGTTATTGTACAAGTTGCATCATTACCATGATGCATAG