Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060869
CDS Infomation

pacid=37478144 polypeptide=PGSC0003DMP400040962 locus=PGSC0003DMG401023679 ID=PGSC0003DMT400060869.v4.03 annot-version=v4.03
Sequence

ATGTGCCCTGAGCTCCTTTCCGGTATACCCTATGGCTACAAATCTGATATCTGGTCGCTT
GGATGCTGCATGTTTGAGATTGCTGCACATCAACCACCATTTAGAGCTGCTGACAAGGCT
GGACTTATTAACAAAATAAACCGGGGTTTGTTCTCACCACTTCCGATTATATACTCCTCC
ACCTTGAAACAGATAATAAAAAGCATGCTAAGGAAAAATCCAGAACACAGACCAACAGCT
GCCGAGTTGTTAAGGCATCAACATTTGCAACCATACCTCCTCTTGTGTCACAACCCTTCA
TCTGTGTTTCTTCCTGTGAAGTCACCGAGCAGCACGAAAGAGAAAACACGATCATCACCT
GGAAAATCTATCAGTCCAAGAGAGAGCAGAGACAGACAGCTGAAGCTAAAAGAGAAAAGA
ACTGTCCTTTGCTTCAATGAAAGTGATAACATCCAGCCAAGAAACTTATCAGATAACCTC
CTCTCGTGTCACAACCCTTCATCTGTGTTTCTTCCTGTGAAGTCCCCAAGCAGCACGAAA
GAGAAAACACGACCATCACCTGGAAAATCTATCACTCCTAGAGATAGCAGAGACAGACAG
CTGAAGCTAAAAGAGAAACGAACTGTCCTTTACTTTGATGAAAGTGATAACATCCAGCCA
AGAAACTTATCAGATAATTATAACACGTTCCGAGCTAAACTTGAGACTAAGAGAGTTGAT
CCAACAAGCTACTCAGTTAGGATCTCTCAAGATAGTGAGGATTCTAAAAGTGGGGAGATG
AGTGAGGCAGCTGTTTGCAATGGATATGATCAACCGGAGACAATCTCGCAAACTGAAACA
ACGATTACTCCAAGCTCTTCAAGTTCAAGGGAAAAAATATGGTCCGAGGAACAAGAGCAT
GCTTCGCCGGAGCATGTTAGACGATTTGAAGAGGATGATAGGAAGAGTAGCAAGACAAAA
GAGCTTGAGGTGTTGAGCAGTCCACTGGACAATGAGGAAGCAGATGTAGTAGAATGTATC
TCCGGAAAGTCTAGCAGAATGACATTGTCTAATGGAAGATCCAACGATAAAACACGATCC
TTTGATGAAGAAAGCACTTCATCGAATTCACAGCCAGCGAAACCAGATACAGAGGCAGCA
CCAAGATGCTATGCTGCTGAAACTGAAAATGGTAGCGAGTGTAGAGAAGTTGCTATTGAC
TGCATGTCAACTGAAAGCGATGGTTCACTTCTACATAAAGACGAGCTAGAAAAGAAAACA
ACAATGGTTTGTGACACCAAACAGTCCAAGAAAGATGCTCTTCGAGCACTGGATGATAAG
GTTTCACAGCTCAAGTCACTAGCCGCGTTAGCTAGTAAGGAGGACAAAGATGATTGGGGG
AATCCTACTCTACAAAGAGCTGAAGCTTTAGAGTCTCTTTTAGAGGTCTGTGCACGACTA
CTTAAGCAGGAAAAAATCGATGAGCTTGCTGGTGTGTTGAAACCATTCGGAGATGATGGA
ATGTCATCTAGAGAGACAGCAATCTGGTTGACTAAAAGTCTCATGACTGCACAAAAATTA
TCCAAGGGGTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400040962
PEP Infomation

pacid=37478144 transcript=PGSC0003DMT400060869 locus=PGSC0003DMG401023679 ID=PGSC0003DMT400060869.v4.03 annot-version=v4.03
Sequence

MCPELLSGIPYGYKSDIWSLGCCMFEIAAHQPPFRAADKAGLINKINRGLFSPLPIIYSS
TLKQIIKSMLRKNPEHRPTAAELLRHQHLQPYLLLCHNPSSVFLPVKSPSSTKEKTRSSP
GKSISPRESRDRQLKLKEKRTVLCFNESDNIQPRNLSDNLLSCHNPSSVFLPVKSPSSTK
EKTRPSPGKSITPRDSRDRQLKLKEKRTVLYFDESDNIQPRNLSDNYNTFRAKLETKRVD
PTSYSVRISQDSEDSKSGEMSEAAVCNGYDQPETISQTETTITPSSSSSREKIWSEEQEH
ASPEHVRRFEEDDRKSSKTKELEVLSSPLDNEEADVVECISGKSSRMTLSNGRSNDKTRS
FDEESTSSNSQPAKPDTEAAPRCYAAETENGSECREVAIDCMSTESDGSLLHKDELEKKT
TMVCDTKQSKKDALRALDDKVSQLKSLAALASKEDKDDWGNPTLQRAEALESLLEVCARL
LKQEKIDELAGVLKPFGDDGMSSRETAIWLTKSLMTAQKLSKGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400060869
Transcript Infomation

pacid=37478144 locus=PGSC0003DMG401023679 ID=PGSC0003DMT400060869.v4.03 annot-version=v4.03
Sequence

ATGTGCCCTGAGCTCCTTTCCGGTATACCCTATGGCTACAAATCTGATATCTGGTCGCTT
GGATGCTGCATGTTTGAGATTGCTGCACATCAACCACCATTTAGAGCTGCTGACAAGGCT
GGACTTATTAACAAAATAAACCGGGGTTTGTTCTCACCACTTCCGATTATATACTCCTCC
ACCTTGAAACAGATAATAAAAAGCATGCTAAGGAAAAATCCAGAACACAGACCAACAGCT
GCCGAGTTGTTAAGGCATCAACATTTGCAACCATACCTCCTCTTGTGTCACAACCCTTCA
TCTGTGTTTCTTCCTGTGAAGTCACCGAGCAGCACGAAAGAGAAAACACGATCATCACCT
GGAAAATCTATCAGTCCAAGAGAGAGCAGAGACAGACAGCTGAAGCTAAAAGAGAAAAGA
ACTGTCCTTTGCTTCAATGAAAGTGATAACATCCAGCCAAGAAACTTATCAGATAACCTC
CTCTCGTGTCACAACCCTTCATCTGTGTTTCTTCCTGTGAAGTCCCCAAGCAGCACGAAA
GAGAAAACACGACCATCACCTGGAAAATCTATCACTCCTAGAGATAGCAGAGACAGACAG
CTGAAGCTAAAAGAGAAACGAACTGTCCTTTACTTTGATGAAAGTGATAACATCCAGCCA
AGAAACTTATCAGATAATTATAACACGTTCCGAGCTAAACTTGAGACTAAGAGAGTTGAT
CCAACAAGCTACTCAGTTAGGATCTCTCAAGATAGTGAGGATTCTAAAAGTGGGGAGATG
AGTGAGGCAGCTGTTTGCAATGGATATGATCAACCGGAGACAATCTCGCAAACTGAAACA
ACGATTACTCCAAGCTCTTCAAGTTCAAGGGAAAAAATATGGTCCGAGGAACAAGAGCAT
GCTTCGCCGGAGCATGTTAGACGATTTGAAGAGGATGATAGGAAGAGTAGCAAGACAAAA
GAGCTTGAGGTGTTGAGCAGTCCACTGGACAATGAGGAAGCAGATGTAGTAGAATGTATC
TCCGGAAAGTCTAGCAGAATGACATTGTCTAATGGAAGATCCAACGATAAAACACGATCC
TTTGATGAAGAAAGCACTTCATCGAATTCACAGCCAGCGAAACCAGATACAGAGGCAGCA
CCAAGATGCTATGCTGCTGAAACTGAAAATGGTAGCGAGTGTAGAGAAGTTGCTATTGAC
TGCATGTCAACTGAAAGCGATGGTTCACTTCTACATAAAGACGAGCTAGAAAAGAAAACA
ACAATGGTTTGTGACACCAAACAGTCCAAGAAAGATGCTCTTCGAGCACTGGATGATAAG
GTTTCACAGCTCAAGTCACTAGCCGCGTTAGCTAGTAAGGAGGACAAAGATGATTGGGGG
AATCCTACTCTACAAAGAGCTGAAGCTTTAGAGTCTCTTTTAGAGGTCTGTGCACGACTA
CTTAAGCAGGAAAAAATCGATGAGCTTGCTGGTGTGTTGAAACCATTCGGAGATGATGGA
ATGTCATCTAGAGAGACAGCAATCTGGTTGACTAAAAGTCTCATGACTGCACAAAAATTA
TCCAAGGGGTCATGA