Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060843
CDS Infomation

pacid=37479523 polypeptide=PGSC0003DMP400040943 locus=PGSC0003DMG400023668 ID=PGSC0003DMT400060843.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAACAGCAAAATATGCAGCTATTAATGGTGGAACTCTGTTTACAGATATGAAA
ACTCAGTTGTCTCTTCCCAAAACTAAAAGAACTGTGGCTTGTGCATATGGGTTTGTGTTT
ATTTTCATTGTTGTTACTACTTTCTTGGCTTTTAGTCCTTCACCAAACTCTTCTTCACCG
TGGTTTACTAACATTTTTTCTTTAAGTAAAGAAGATGTTGGTACTTCTTATAGATCTCAG
TTTTCTTCTGTTTTCTCTAATCTTTTTCCAAGAAGTTCAAAAAACAATTTTGAGCAACCC
CATTTGGATAAAAAGGGACTAATTGTTGAAAAGAGTGAAAATTATACTCAGAATGATGAT
AAAGGTGGAGTCTTGGAAAACCCCTTTAATTCTTCTTCTGTGTTGAGTGATAAAGAATCA
TCAGTTGTGAAGAATGAGACTTTAAGTGAAGTTTTTGATGATAAAGTTGGAATCTTGATG
GGAAATCAGACTTTTGATGATAAAGTTGGAATCTTGATGGGAAATCAGACTTTTGATGAT
AAAGTTGGAATCTTGATGGGAAATCAGACTTTTGATGATAAAGTTGGAATCTTGATGGCA
AATCAGAGCTCAATTGAGAGTTATAAGTCTGCTGCTGCTGTGAATCAGACTGAAAGTAGA
GATTTTGATGATAAAGTTGGAATCTTTAAGGCAAATCAGAGCTCAATTGAGAGTTATAAG
TCTGCTGCTGCTGTGAATCAGACTGAAAGTAGAGATTTTGATGATAAAGTTGGAATCTTT
AAGGCAAATCAGAGCTCAATTGAGAGTTATAAGTCTGCTGCTGCTGTGAATCAGACTGAA
AGTAGAGATTTTGATGATAAAGTTGGAATCTTTAAGGCAAATCAGAGCTCAATTGAGAGT
TATAAGTCTGCTGCTGCTGTGAATCAGACTGAAAGTAGAGATTTTGATGATAAAGTTGGA
ATCTTTAAGGCAAATCAGAGCACAATTGAGAAAAAATCAGCACCAAAGTTGTCTTCTAAG
GGAAAAAGTGCAAATGTGGAAAAGAAAAGAGATGTTGATTTGGTTAAGTCTTTGTTGAAT
TGTGATTTCTTTGATGGGAATTGGGTGAAAGATGAATCTTACCCTTTGTATAAACCTGGT
TCTTGTTCACTTATTGATGAGCAATTCAATTGTTTTCTCAATGATAGGCCTGACAGTGGT
TACTTGAAGATGAAATGGAAACCCAATGCATGTAGTCTTCCTAGATTGAATGCTACTCAT
ATGCTGGAATTGTTAAGAGGAAAGCGTCTAGTTTTCGTTGGCGATTCTTTGAATAGGAAT
ATGTGGGAATCCCTTATTTGTATACTTAAAAACTCTGTAAAAAATCAGAAAAAGGTTTAT
GAAGAATCTGGAAGACACCATTTCAGGACAGAAGCTTTCTATTCGTTTATATTCAAAGAG
TATAAATGCAGAGTGGAGTTCTTTGTGTCTCCATTCTTGGTTCAACAATGGGAAGTTGCA
GATAAAAAAGGAGGTAAGAAAGAAACGCTTCGACTTGATTTGATCGGAGAGTCTGCTGAT
AAGTATAAAAACGCGGATATCTTAGTCTTCAACACCGGTCACTGGTGGACTCACGAAAAG
ACTTCGTTAGGGAAGGACTATTATCAAGAAGGAAATCATGTCCACAACGAACTAAACGTT
CTTGAGGCCTTTCGGAGAGCATTAACAACATGGGGTAGATGGATCGATGCTCATATCAAT
CCCAAGAAGACGTTCGTTCTCTTCAGAGGTTATTCTGCTTCTCATTTCAGTGGCGGGCAA
TGGAATTCTGGCGGGGCGTGTGACAGTGAAACAGAACCAATAAAGAACGACACATATTTG
ACCCCGTATCCATCCAAGATGAAGGTACTAGAAGACGTCTTCAAAGGGATGAAAACTCAA
GTCTCGTATCTCAACATCACAAGAATGACGGACTATAGAAAAGACGGTCATCCATCGATA
TATAGGAAACCGAATTTGACACTCAAAGAGAGGAGATCACAATGGAGGTATCAAGATTGT
AGCCATTGGTGCCTTCCCGGTGTACCCGATGCTTGGAATGAGCTCTTATATGCTGAACTT
CTGGTAAGATTACACCAAAAACAACAAGAGAAAAAGTCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400040943
PEP Infomation

pacid=37479523 transcript=PGSC0003DMT400060843 locus=PGSC0003DMG400023668 ID=PGSC0003DMT400060843.v4.03 annot-version=v4.03
Sequence

MAETAKYAAINGGTLFTDMKTQLSLPKTKRTVACAYGFVFIFIVVTTFLAFSPSPNSSSP
WFTNIFSLSKEDVGTSYRSQFSSVFSNLFPRSSKNNFEQPHLDKKGLIVEKSENYTQNDD
KGGVLENPFNSSSVLSDKESSVVKNETLSEVFDDKVGILMGNQTFDDKVGILMGNQTFDD
KVGILMGNQTFDDKVGILMANQSSIESYKSAAAVNQTESRDFDDKVGIFKANQSSIESYK
SAAAVNQTESRDFDDKVGIFKANQSSIESYKSAAAVNQTESRDFDDKVGIFKANQSSIES
YKSAAAVNQTESRDFDDKVGIFKANQSTIEKKSAPKLSSKGKSANVEKKRDVDLVKSLLN
CDFFDGNWVKDESYPLYKPGSCSLIDEQFNCFLNDRPDSGYLKMKWKPNACSLPRLNATH
MLELLRGKRLVFVGDSLNRNMWESLICILKNSVKNQKKVYEESGRHHFRTEAFYSFIFKE
YKCRVEFFVSPFLVQQWEVADKKGGKKETLRLDLIGESADKYKNADILVFNTGHWWTHEK
TSLGKDYYQEGNHVHNELNVLEAFRRALTTWGRWIDAHINPKKTFVLFRGYSASHFSGGQ
WNSGGACDSETEPIKNDTYLTPYPSKMKVLEDVFKGMKTQVSYLNITRMTDYRKDGHPSI
YRKPNLTLKERRSQWRYQDCSHWCLPGVPDAWNELLYAELLVRLHQKQQEKKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400060843
Transcript Infomation

pacid=37479523 locus=PGSC0003DMG400023668 ID=PGSC0003DMT400060843.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAACAGCAAAATATGCAGCTATTAATGGTGGAACTCTGTTTACAGATATGAAA
ACTCAGTTGTCTCTTCCCAAAACTAAAAGAACTGTGGCTTGTGCATATGGGTTTGTGTTT
ATTTTCATTGTTGTTACTACTTTCTTGGCTTTTAGTCCTTCACCAAACTCTTCTTCACCG
TGGTTTACTAACATTTTTTCTTTAAGTAAAGAAGATGTTGGTACTTCTTATAGATCTCAG
TTTTCTTCTGTTTTCTCTAATCTTTTTCCAAGAAGTTCAAAAAACAATTTTGAGCAACCC
CATTTGGATAAAAAGGGACTAATTGTTGAAAAGAGTGAAAATTATACTCAGAATGATGAT
AAAGGTGGAGTCTTGGAAAACCCCTTTAATTCTTCTTCTGTGTTGAGTGATAAAGAATCA
TCAGTTGTGAAGAATGAGACTTTAAGTGAAGTTTTTGATGATAAAGTTGGAATCTTGATG
GGAAATCAGACTTTTGATGATAAAGTTGGAATCTTGATGGGAAATCAGACTTTTGATGAT
AAAGTTGGAATCTTGATGGGAAATCAGACTTTTGATGATAAAGTTGGAATCTTGATGGCA
AATCAGAGCTCAATTGAGAGTTATAAGTCTGCTGCTGCTGTGAATCAGACTGAAAGTAGA
GATTTTGATGATAAAGTTGGAATCTTTAAGGCAAATCAGAGCTCAATTGAGAGTTATAAG
TCTGCTGCTGCTGTGAATCAGACTGAAAGTAGAGATTTTGATGATAAAGTTGGAATCTTT
AAGGCAAATCAGAGCTCAATTGAGAGTTATAAGTCTGCTGCTGCTGTGAATCAGACTGAA
AGTAGAGATTTTGATGATAAAGTTGGAATCTTTAAGGCAAATCAGAGCTCAATTGAGAGT
TATAAGTCTGCTGCTGCTGTGAATCAGACTGAAAGTAGAGATTTTGATGATAAAGTTGGA
ATCTTTAAGGCAAATCAGAGCACAATTGAGAAAAAATCAGCACCAAAGTTGTCTTCTAAG
GGAAAAAGTGCAAATGTGGAAAAGAAAAGAGATGTTGATTTGGTTAAGTCTTTGTTGAAT
TGTGATTTCTTTGATGGGAATTGGGTGAAAGATGAATCTTACCCTTTGTATAAACCTGGT
TCTTGTTCACTTATTGATGAGCAATTCAATTGTTTTCTCAATGATAGGCCTGACAGTGGT
TACTTGAAGATGAAATGGAAACCCAATGCATGTAGTCTTCCTAGATTGAATGCTACTCAT
ATGCTGGAATTGTTAAGAGGAAAGCGTCTAGTTTTCGTTGGCGATTCTTTGAATAGGAAT
ATGTGGGAATCCCTTATTTGTATACTTAAAAACTCTGTAAAAAATCAGAAAAAGGTTTAT
GAAGAATCTGGAAGACACCATTTCAGGACAGAAGCTTTCTATTCGTTTATATTCAAAGAG
TATAAATGCAGAGTGGAGTTCTTTGTGTCTCCATTCTTGGTTCAACAATGGGAAGTTGCA
GATAAAAAAGGAGGTAAGAAAGAAACGCTTCGACTTGATTTGATCGGAGAGTCTGCTGAT
AAGTATAAAAACGCGGATATCTTAGTCTTCAACACCGGTCACTGGTGGACTCACGAAAAG
ACTTCGTTAGGGAAGGACTATTATCAAGAAGGAAATCATGTCCACAACGAACTAAACGTT
CTTGAGGCCTTTCGGAGAGCATTAACAACATGGGGTAGATGGATCGATGCTCATATCAAT
CCCAAGAAGACGTTCGTTCTCTTCAGAGGTTATTCTGCTTCTCATTTCAGTGGCGGGCAA
TGGAATTCTGGCGGGGCGTGTGACAGTGAAACAGAACCAATAAAGAACGACACATATTTG
ACCCCGTATCCATCCAAGATGAAGGTACTAGAAGACGTCTTCAAAGGGATGAAAACTCAA
GTCTCGTATCTCAACATCACAAGAATGACGGACTATAGAAAAGACGGTCATCCATCGATA
TATAGGAAACCGAATTTGACACTCAAAGAGAGGAGATCACAATGGAGGTATCAAGATTGT
AGCCATTGGTGCCTTCCCGGTGTACCCGATGCTTGGAATGAGCTCTTATATGCTGAACTT
CTGGTAAGATTACACCAAAAACAACAAGAGAAAAAGTCATAG