Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060831
CDS Infomation

pacid=37479174 polypeptide=PGSC0003DMP400040933 locus=PGSC0003DMG400023661 ID=PGSC0003DMT400060831.v4.03 annot-version=v4.03
Sequence

ATGTCAGTCGATTCAGCGCCGCCGGTGGAAAAACTCACCCTAAGCGACGCCGTAGAGGAG
GCGAAATTCTCTCAACGCGTCCCGATCCGTTCAATCGTCGGCCGTCCTGACGGTGGAGCT
GGACTCGCCGGAAATGTTGTCAAAATCGGTGGTTGGGTCAAAACAGGACGAGAACAAGGC
AAGGGTTCCTTCGCTTTCCTTGAAGTGAATGACGGTTCATGCCCAGGGAATCTCCAAGTG
ATTGTTGATGCTTCAGTTCATAAGCTTGGTGATTTGGTACTTACTGGTACTTGCGTACAT
GTGGAAGGTGAGTTGAAGGTTCCTCCTGAAGGTGCGAAGCAGAAAGTTGAGCTTCGTGTT
CAGAAGGTTATATCTGTGGGTACCGTTGATGCTGCTAAGTATCCATTGCCGAAGACTAAG
TTGACGCTTGAGTTTTTAAGGGATGTTGTTCATCTTCGATCCCGAACGAACACTATTTCT
GCTGTTGCTAGAATCCGTAATGCCTTAGCTTATGCCACCCATACATTCTTCCAAAACAAT
GGGTTTCTTTATATCCACACCCCAATCATCACAACAAGTGATTGTGAGGGTGCTGGTGAG
ATGTTCCAAGTTACTAGTTTGATAAGCGAAGCTGAAAAGTTGGAGAAGGAGCTGAAAGAG
AATCCTGCTCCTTCAGAATCTGACATTCAAGCTGCTGAGCAACTTGCCAAAGAGAAAGGT
GAGGTAGTTGCTCAGCTAAAAGCTAGTAAGGCGAGCATGGACAAAACTGATCCCAATATT
GCGGACATCAACAAGAAAATCAGTGCTGCAGTTGCTGAGCTACAACGAGCTAAAGAGAAT
CTCCTGAAGTTGCAAGAGAGATCTAAATTGGGAGAAAGATACAGACTCTCTGCTGGTATT
CCTAAAAAGGATGGAAAAATTGATTACTCTGAGGATTTTTTTGGACGACAAGCTTTCTTG
ACAGTGTCTGGCCAACTCCAAGTTGAAACCTATGCATGTGCACTTTCTAGTGTGTATACT
TTTGGACCAACTTTTCGAGCTGAACAGTCCCACACTACTCGGCATCTTGCAGAGTTCTGG
ATGGTGGAGCCTGAAATTGCTTTTGCTGATATACAGGATGATATGAATTGTGCTGAGGCG
TATGTGAAGTTTCTGTGTCAGTGGTTACTTGACCATTGCCTTGATGACATGGAATTTATG
ACTAAATTTGTAGATAAAGATGCTCTGAGTAGACTTAGAATGGTTGCCTCATCGAACTGC
CATCGGATAACTTATACAGAAGCCATAGATATTCTTGAGGTAGCAGCTAAAGTGAAGAAA
TTTGAAAATAAAGTAGAGTGGGGGATTGACTTAGCATCTGAACATGAAAGATATTTGACC
GAAGAGCATTTTAAGGCACCTGTTATTGTGTTCAACTACCCAAAAGGGATAAAAGCATTT
TACATGAAGGTGAATGAAGACAACAAGACAGTTGCTGCCATGGATCTGCTTGTACCAAAG
GTGGGAGAACTAATTGGAGGAAGCCAAAGAGAAGAGAATTATGAGGTCCTCAGATCAAGG
ATACTGGATATGGGTCTACCACTAGAGCCATATGAGTGGTATCTGGACCTGAGGCGCTAT
GGTACTGTAAAGCACAGTGGTTTTGGTTTAGGCTTTGAACGAATGATTCTGTTTGCCACC
GGGATAGAAAACATTCGGGATGTCATTCCCTTCCCTAGATATCCAGGGAGAGCCGATCTT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400040933
PEP Infomation

pacid=37479174 transcript=PGSC0003DMT400060831 locus=PGSC0003DMG400023661 ID=PGSC0003DMT400060831.v4.03 annot-version=v4.03
Sequence

MSVDSAPPVEKLTLSDAVEEAKFSQRVPIRSIVGRPDGGAGLAGNVVKIGGWVKTGREQG
KGSFAFLEVNDGSCPGNLQVIVDASVHKLGDLVLTGTCVHVEGELKVPPEGAKQKVELRV
QKVISVGTVDAAKYPLPKTKLTLEFLRDVVHLRSRTNTISAVARIRNALAYATHTFFQNN
GFLYIHTPIITTSDCEGAGEMFQVTSLISEAEKLEKELKENPAPSESDIQAAEQLAKEKG
EVVAQLKASKASMDKTDPNIADINKKISAAVAELQRAKENLLKLQERSKLGERYRLSAGI
PKKDGKIDYSEDFFGRQAFLTVSGQLQVETYACALSSVYTFGPTFRAEQSHTTRHLAEFW
MVEPEIAFADIQDDMNCAEAYVKFLCQWLLDHCLDDMEFMTKFVDKDALSRLRMVASSNC
HRITYTEAIDILEVAAKVKKFENKVEWGIDLASEHERYLTEEHFKAPVIVFNYPKGIKAF
YMKVNEDNKTVAAMDLLVPKVGELIGGSQREENYEVLRSRILDMGLPLEPYEWYLDLRRY
GTVKHSGFGLGFERMILFATGIENIRDVIPFPRYPGRADL*

Transcript Sequence

Transcript ID

PGSC0003DMT400060831
Transcript Infomation

pacid=37479174 locus=PGSC0003DMG400023661 ID=PGSC0003DMT400060831.v4.03 annot-version=v4.03
Sequence

ATGTCAGTCGATTCAGCGCCGCCGGTGGAAAAACTCACCCTAAGCGACGCCGTAGAGGAG
GCGAAATTCTCTCAACGCGTCCCGATCCGTTCAATCGTCGGCCGTCCTGACGGTGGAGCT
GGACTCGCCGGAAATGTTGTCAAAATCGGTGGTTGGGTCAAAACAGGACGAGAACAAGGC
AAGGGTTCCTTCGCTTTCCTTGAAGTGAATGACGGTTCATGCCCAGGGAATCTCCAAGTG
ATTGTTGATGCTTCAGTTCATAAGCTTGGTGATTTGGTACTTACTGGTACTTGCGTACAT
GTGGAAGGTGAGTTGAAGGTTCCTCCTGAAGGTGCGAAGCAGAAAGTTGAGCTTCGTGTT
CAGAAGGTTATATCTGTGGGTACCGTTGATGCTGCTAAGTATCCATTGCCGAAGACTAAG
TTGACGCTTGAGTTTTTAAGGGATGTTGTTCATCTTCGATCCCGAACGAACACTATTTCT
GCTGTTGCTAGAATCCGTAATGCCTTAGCTTATGCCACCCATACATTCTTCCAAAACAAT
GGGTTTCTTTATATCCACACCCCAATCATCACAACAAGTGATTGTGAGGGTGCTGGTGAG
ATGTTCCAAGTTACTAGTTTGATAAGCGAAGCTGAAAAGTTGGAGAAGGAGCTGAAAGAG
AATCCTGCTCCTTCAGAATCTGACATTCAAGCTGCTGAGCAACTTGCCAAAGAGAAAGGT
GAGGTAGTTGCTCAGCTAAAAGCTAGTAAGGCGAGCATGGACAAAACTGATCCCAATATT
GCGGACATCAACAAGAAAATCAGTGCTGCAGTTGCTGAGCTACAACGAGCTAAAGAGAAT
CTCCTGAAGTTGCAAGAGAGATCTAAATTGGGAGAAAGATACAGACTCTCTGCTGGTATT
CCTAAAAAGGATGGAAAAATTGATTACTCTGAGGATTTTTTTGGACGACAAGCTTTCTTG
ACAGTGTCTGGCCAACTCCAAGTTGAAACCTATGCATGTGCACTTTCTAGTGTGTATACT
TTTGGACCAACTTTTCGAGCTGAACAGTCCCACACTACTCGGCATCTTGCAGAGTTCTGG
ATGGTGGAGCCTGAAATTGCTTTTGCTGATATACAGGATGATATGAATTGTGCTGAGGCG
TATGTGAAGTTTCTGTGTCAGTGGTTACTTGACCATTGCCTTGATGACATGGAATTTATG
ACTAAATTTGTAGATAAAGATGCTCTGAGTAGACTTAGAATGGTTGCCTCATCGAACTGC
CATCGGATAACTTATACAGAAGCCATAGATATTCTTGAGGTAGCAGCTAAAGTGAAGAAA
TTTGAAAATAAAGTAGAGTGGGGGATTGACTTAGCATCTGAACATGAAAGATATTTGACC
GAAGAGCATTTTAAGGCACCTGTTATTGTGTTCAACTACCCAAAAGGGATAAAAGCATTT
TACATGAAGGTGAATGAAGACAACAAGACAGTTGCTGCCATGGATCTGCTTGTACCAAAG
GTGGGAGAACTAATTGGAGGAAGCCAAAGAGAAGAGAATTATGAGGTCCTCAGATCAAGG
ATACTGGATATGGGTCTACCACTAGAGCCATATGAGTGGTATCTGGACCTGAGGCGCTAT
GGTACTGTAAAGCACAGTGGTTTTGGTTTAGGCTTTGAACGAATGATTCTGTTTGCCACC
GGGATAGAAAACATTCGGGATGTCATTCCCTTCCCTAGATATCCAGGGAGAGCCGATCTT
TAA