Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060798
CDS Infomation

pacid=37471673 polypeptide=PGSC0003DMP400040909 locus=PGSC0003DMG400023645 ID=PGSC0003DMT400060798.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTTATAGTGCTGTAATTTCTCTTATTCAATCTCTTGACGAACGAAATTTTCAT
GAACTCTTTCATGGTCATACTGCTGAAACGCTCGATTCTCTTCGTGCTATTGCTGAATAT
TTCCAAAAAGTTCTTGATGAATTTGAACCTGGAAAAATCAAATCTTTGGAGGAAAAAATT
AGAGATGCTGCTAGTGAGGCCGAAGATATTGTTGAGCTGAAAACGCGTCAAATCATCAAA
GGGAGAAGCTGGATGTTTGGAATTTTACAACACCAGGATTTGCTACCACTTGTTGAAAAA
ATGGATACAATAAAGAAACAGGTGATGGAGATTGTTTCTCATGATGCTGATCAAATTCTT
GAATTATCCGGGGATTCCATGATTGGTACTTCTTCTACAAGTTATGCAATGCTGTCAGAT
AAGTTGGAAGATGGTATCGTTCAGGGAATTGATGATGACTTGGAGATCATAATTAAAAGA
TTGACAGGACCACCATCGGATCTAGACATTGTCACAATATCAGGCATGGGTGGCATTGGC
AAAACAACACTCGCTAGAAAAGCTTATGATCATCTAACAATCAGGTATCACTTTGACATT
CTTGCTTGGGTTACAATATCTCAAGAATTTCGATGTAGAAATGTTTTGTTAGAAGCTTTA
CATTGCATTTTAAAGAAAATAGATATTGTGAATGCAAGAGATTATGATAAGATGGATGAC
AATGAGTTAGCTGACCTGGTGCAAAAGAACCTTAAGGGTCGAAGATACCTTGTTGTTGTT
GATGATATTTGGAGTAGGGATGTTTGGGATAGTATAAGAGGAATATTTCCTAATTACAAC
AATGGGAGTAGAATCTTATTGACTACTAGAGAAACTGAGGTAGCAATGTATGCAAATGCT
TGTAGACCTCATGAGATGAACCTTTTGGATTTAGAAAACGGTTGGAAGTTACTTTGTGAT
AAGGTGTTTGGACCAAAACATGATCATCCTCCCGAATTGGAAGAAATTGGAAAGGAAATA
GTAGAAAAATGCAGAGGACTACCCTTGACAATTTCAGTGATTGCTAGACATCTCTCTAAA
GTGGCCAGGACATTCGAAGGTTGGAAGGATGTTGCCCAAACCTTGAGTGAAATTATTGCT
AGTCATCCAGATAAATGCTTAGGAGTGCTCGGTTTGAGTTACCACCACTTGCCTAATCAC
CTCAAACCTTGCTTTCTATCTATGAGTGGTTTCCCAGAGGATTTTCAGTTTGAGACTCTG
ATATTGATCCAATTATGGATTGCAGAAGGTTTCATTATAAGGACTTCCGAAAATGGTAAA
AGTTTGGAGGAAGTGGCAATAGATTATTTGGAGGACCCTATTAGCAGGAACTTGATACAG
GCTAGAGAAAGGAGATTCAATGGTGAGATAAAAACATGTGGAATACATGATCTACTGCGT
GAGTTCTGTTTGACAGAAGCTGAAATGACAAAGCATATGTATGTTAACAGAACTTACCAT
ACTTTTCCAACACAAATGCATAATGTTCGTCGCTTCAGTTTTCAAGCTTTATCTTATTCA
GCTGATGATTGTAGTAAGTTTCCACTTGTGATTACAAAATTGTTTCATTTGAGATATCTC
CGAGTTCACTTTAGCGGAGATATTCCTGAATCAATCTCAAAGCTTCAGAATTTGCAAACT
CTAATTTGTAGAGGTTTTTCTATTCATGTAACTTTACCTGGGAAGATATGGATGATGAGG
AACTTGAGGTATATGCATTTGAGAGAAGCCACTTATTTAGCCAGTCCTAAAACAGAAAGT
ATTCTAAATAAGCATCTTGGGATGCCAAATCTAGAGGAACTTTCTGGTGTTTGCTTCAAC
AGTTGTACAAATGAAGTCTTTTCTGGCATTCCCAATATAAAGAGGTTGATCATTCATGTA
CCTCATTTCAGGGAAATTATTCCCCATCGGCTATTGGATATGTCTAGATTGACGAAACTC
GAAGCATTCAAGTTTTACGCAACTTTTTTTCAACACCCCATCAAGAGATTTGGTTTTCCA
ACATCACTTAGGCGGTTGTCTTTAAATTTTTATCATGATTTTGATTGGGCAGACATATCA
TCAACTGTTATGATGTTGCCAAATCTTGAAGAGCTCAAACTTAAACATTGTCCAACCATG
AGTGATGAATGGATATTGTGTGATGAAGGTAAGTTCAAAAGCTTGAAGTTGTTGTTACTG
AGTCTCACAAATCTTGCGCGTTGGGAAGCTAGCAGTAATAACATCCCAAATCTAAAACGC
CTAGTTCTGAAGAAGTGTCGCGGCCTGCAAGAAATTCCAGCAGACTTTGGGGAAATTTGT
ACTTTGGAGTCAATTGAGTTACATGATTGCAGCACTACTGCTGAGGATTCTGCAAGAAAT
ATTGTACAAGAACAAGACGACATGGGAAATAATTTCCTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400040909
PEP Infomation

pacid=37471673 transcript=PGSC0003DMT400060798 locus=PGSC0003DMG400023645 ID=PGSC0003DMT400060798.v4.03 annot-version=v4.03
Sequence

MAAYSAVISLIQSLDERNFHELFHGHTAETLDSLRAIAEYFQKVLDEFEPGKIKSLEEKI
RDAASEAEDIVELKTRQIIKGRSWMFGILQHQDLLPLVEKMDTIKKQVMEIVSHDADQIL
ELSGDSMIGTSSTSYAMLSDKLEDGIVQGIDDDLEIIIKRLTGPPSDLDIVTISGMGGIG
KTTLARKAYDHLTIRYHFDILAWVTISQEFRCRNVLLEALHCILKKIDIVNARDYDKMDD
NELADLVQKNLKGRRYLVVVDDIWSRDVWDSIRGIFPNYNNGSRILLTTRETEVAMYANA
CRPHEMNLLDLENGWKLLCDKVFGPKHDHPPELEEIGKEIVEKCRGLPLTISVIARHLSK
VARTFEGWKDVAQTLSEIIASHPDKCLGVLGLSYHHLPNHLKPCFLSMSGFPEDFQFETL
ILIQLWIAEGFIIRTSENGKSLEEVAIDYLEDPISRNLIQARERRFNGEIKTCGIHDLLR
EFCLTEAEMTKHMYVNRTYHTFPTQMHNVRRFSFQALSYSADDCSKFPLVITKLFHLRYL
RVHFSGDIPESISKLQNLQTLICRGFSIHVTLPGKIWMMRNLRYMHLREATYLASPKTES
ILNKHLGMPNLEELSGVCFNSCTNEVFSGIPNIKRLIIHVPHFREIIPHRLLDMSRLTKL
EAFKFYATFFQHPIKRFGFPTSLRRLSLNFYHDFDWADISSTVMMLPNLEELKLKHCPTM
SDEWILCDEGKFKSLKLLLLSLTNLARWEASSNNIPNLKRLVLKKCRGLQEIPADFGEIC
TLESIELHDCSTTAEDSARNIVQEQDDMGNNFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400060798
Transcript Infomation

pacid=37471673 locus=PGSC0003DMG400023645 ID=PGSC0003DMT400060798.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTTATAGTGCTGTAATTTCTCTTATTCAATCTCTTGACGAACGAAATTTTCAT
GAACTCTTTCATGGTCATACTGCTGAAACGCTCGATTCTCTTCGTGCTATTGCTGAATAT
TTCCAAAAAGTTCTTGATGAATTTGAACCTGGAAAAATCAAATCTTTGGAGGAAAAAATT
AGAGATGCTGCTAGTGAGGCCGAAGATATTGTTGAGCTGAAAACGCGTCAAATCATCAAA
GGGAGAAGCTGGATGTTTGGAATTTTACAACACCAGGATTTGCTACCACTTGTTGAAAAA
ATGGATACAATAAAGAAACAGGTGATGGAGATTGTTTCTCATGATGCTGATCAAATTCTT
GAATTATCCGGGGATTCCATGATTGGTACTTCTTCTACAAGTTATGCAATGCTGTCAGAT
AAGTTGGAAGATGGTATCGTTCAGGGAATTGATGATGACTTGGAGATCATAATTAAAAGA
TTGACAGGACCACCATCGGATCTAGACATTGTCACAATATCAGGCATGGGTGGCATTGGC
AAAACAACACTCGCTAGAAAAGCTTATGATCATCTAACAATCAGGTATCACTTTGACATT
CTTGCTTGGGTTACAATATCTCAAGAATTTCGATGTAGAAATGTTTTGTTAGAAGCTTTA
CATTGCATTTTAAAGAAAATAGATATTGTGAATGCAAGAGATTATGATAAGATGGATGAC
AATGAGTTAGCTGACCTGGTGCAAAAGAACCTTAAGGGTCGAAGATACCTTGTTGTTGTT
GATGATATTTGGAGTAGGGATGTTTGGGATAGTATAAGAGGAATATTTCCTAATTACAAC
AATGGGAGTAGAATCTTATTGACTACTAGAGAAACTGAGGTAGCAATGTATGCAAATGCT
TGTAGACCTCATGAGATGAACCTTTTGGATTTAGAAAACGGTTGGAAGTTACTTTGTGAT
AAGGTGTTTGGACCAAAACATGATCATCCTCCCGAATTGGAAGAAATTGGAAAGGAAATA
GTAGAAAAATGCAGAGGACTACCCTTGACAATTTCAGTGATTGCTAGACATCTCTCTAAA
GTGGCCAGGACATTCGAAGGTTGGAAGGATGTTGCCCAAACCTTGAGTGAAATTATTGCT
AGTCATCCAGATAAATGCTTAGGAGTGCTCGGTTTGAGTTACCACCACTTGCCTAATCAC
CTCAAACCTTGCTTTCTATCTATGAGTGGTTTCCCAGAGGATTTTCAGTTTGAGACTCTG
ATATTGATCCAATTATGGATTGCAGAAGGTTTCATTATAAGGACTTCCGAAAATGGTAAA
AGTTTGGAGGAAGTGGCAATAGATTATTTGGAGGACCCTATTAGCAGGAACTTGATACAG
GCTAGAGAAAGGAGATTCAATGGTGAGATAAAAACATGTGGAATACATGATCTACTGCGT
GAGTTCTGTTTGACAGAAGCTGAAATGACAAAGCATATGTATGTTAACAGAACTTACCAT
ACTTTTCCAACACAAATGCATAATGTTCGTCGCTTCAGTTTTCAAGCTTTATCTTATTCA
GCTGATGATTGTAGTAAGTTTCCACTTGTGATTACAAAATTGTTTCATTTGAGATATCTC
CGAGTTCACTTTAGCGGAGATATTCCTGAATCAATCTCAAAGCTTCAGAATTTGCAAACT
CTAATTTGTAGAGGTTTTTCTATTCATGTAACTTTACCTGGGAAGATATGGATGATGAGG
AACTTGAGGTATATGCATTTGAGAGAAGCCACTTATTTAGCCAGTCCTAAAACAGAAAGT
ATTCTAAATAAGCATCTTGGGATGCCAAATCTAGAGGAACTTTCTGGTGTTTGCTTCAAC
AGTTGTACAAATGAAGTCTTTTCTGGCATTCCCAATATAAAGAGGTTGATCATTCATGTA
CCTCATTTCAGGGAAATTATTCCCCATCGGCTATTGGATATGTCTAGATTGACGAAACTC
GAAGCATTCAAGTTTTACGCAACTTTTTTTCAACACCCCATCAAGAGATTTGGTTTTCCA
ACATCACTTAGGCGGTTGTCTTTAAATTTTTATCATGATTTTGATTGGGCAGACATATCA
TCAACTGTTATGATGTTGCCAAATCTTGAAGAGCTCAAACTTAAACATTGTCCAACCATG
AGTGATGAATGGATATTGTGTGATGAAGGTAAGTTCAAAAGCTTGAAGTTGTTGTTACTG
AGTCTCACAAATCTTGCGCGTTGGGAAGCTAGCAGTAATAACATCCCAAATCTAAAACGC
CTAGTTCTGAAGAAGTGTCGCGGCCTGCAAGAAATTCCAGCAGACTTTGGGGAAATTTGT
ACTTTGGAGTCAATTGAGTTACATGATTGCAGCACTACTGCTGAGGATTCTGCAAGAAAT
ATTGTACAAGAACAAGACGACATGGGAAATAATTTCCTTTAA