Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060792
CDS Infomation

pacid=37475061 polypeptide=PGSC0003DMP400040906 locus=PGSC0003DMG400023643 ID=PGSC0003DMT400060792.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGCACATTTTCTTATTGATACTTCTCTTTCTACTTCAATTTCCTATATCAATT
GCTTCCTCAAATGATACTGACCAACAAGCCCTACTAGCTTTCCAAAATCTTATTACAAGT
CCCAATCAATTTTTGGCTAATAATTGGACCAAGAATGCATCTTTTTGCTCTTGGTTCGGT
GTCACGTGCAGTGCAAGAAGGCTAAGGCTTGTGGCCTTGGCTCTTCCTAATTTGCAACTT
CAAGGCACAATTACCGGGATTAGGGCATTGCTTGTCAGAGAGCTCAATCTCGAGAACAAC
TTATTCAATGGGGGCATCCCTTACGGACTTGGCAAGTTGCCTCGCTTGAGAGTCATTGAT
TTTCAAAACAATCAGCTCCAAGGAAGTATTCCAACAAGTCTATTTCAACACCAGAGAGTT
CAAATCATTTCATTGGCTTTCAATGAACTCAGTGGTGAAATGTGGAAAGGGCCATGGTAT
GTACCAGAACTCAAAGTCTTAGATCTCGCGAACAATAGCCTCACGGGTATAATCCCTCCT
TATGTTGGTAATGCCACAAAATTGATGAACTTCGATTTGTCTGGGAGTAGAATCAATGGT
ACCATTCCAATGGAAATTAGTAATTTGAGCCAACTTGCATCTTTGTCCTTGGTTGATAAT
CAGTTAACAGGTTTTATTCCTGGATCACTGTTTAACATTTCATCACTACTTGGCGTAACT
CTGGGATTGAATCACCTTTCTGGTCCTCTCTTGCTTGATGAAGGGAATATTGAGTCAAAT
CTGAAGATACTAAGTATATCTTTCAATCAAATTTCTGGTCGCATTCCTTCTAACATATGC
CAACTCACACAGCTCAAAATTTTGTCCATATCTTTCAATAACATAACTGGAGACATACCC
AAAAATATTGATTGTCTAGCCAAGCTCGAGATGTTCTTAATTAGTGAGAATGCAATAAGT
GGAACTATTCCTACTTCATTGGGCAATATTTCCACTCTGCAACATCTTGATTCGGGGGAC
AATCGGTTGGAGGGACAAGTTCCTCAAGAATTAGGGAAGCTATCAAATTTGAGGGTGTTA
AACTTTCACAAGAATTTCAATCTTATTGGTCAAATTCCAAAGGCTATTTTCAATATATCT
TCTTTGGAAGCGATTGATTTCAGTTTCAATAACCTCTCAGGTAGAATTCCAGCCACTACC
GATCTTCATCTTCCGAACCTTAAAGAGTTTATGTTGGCATTCAATCAGCTCGAAGGAGAA
ATTCCTCAATACATAGCAAATGCTTCCAAGCTTGAGATACTGGCGCTAAATTATAACTTT
CTGACAGTTGCTATTCCTACTAATTTAGGAAATCTTCGCGAGCTGCAATCACTGTTCCTA
GATCATAATCAACTTACCAATGAACCAAGAGAGCCTAAGTTGTTATTCTTGAATTCTTTG
GTGAACTGTAGGATGCTGAAATATGTAGATGTGAGTTTCAATCCGTTGAATGGCGTTCTT
CCCAATTCTATTGGGAATCTTTCATCTACTATTGAAGTATTTGATATAAGAAATGCACAC
ATCTATGGCCTCATTCCCACAAGTATAGGCAACATGAGCGGTCTTATATCCCTAGTCTTT
AATGAAAACAACTTGACAGGATATATTCCTCCAGAGATTGGTAAGCTTAAACAACTCCAA
GGTCTGTACCTATTTAACAACAAATTGCAGGGACATATTCCAGAGGCGGTATGCCATTTA
TCTAATTTGGTCGAATTAGAAATGGATGGTAATGAACTCTCTGGATCAATTCCAGAATGT
TTAGGAAATCTTGGGATGCTACTATATCTTTCGTTGGGTTCAAATGAATTTTCACCAAAA
TTTCCCTCGAGTCTTTGGAAGATGAGTGGACTTCTCTACCTAAACATGTCACATAATTCT
ATAGAGGGAGAAGTTCCACCAACTATTGGAGAACTGAAAGCCATTGAAGAACTACATCTT
TCCGGTAATCACTTTTCAGGCCAGGTACCAAGCAGATTGGGAGACCTCCAAAGATTGAAG
TCTCTTGACCTATCAAACAATTCATTTTCAGGCTCAATTCCATTATCCATTACCAACTTG
ATGAGCTTAGAAGACTTGGATTTGTCTTTAAATGCATTGTCAGGTACTATTCCTAAGTCT
TTGGAAAAACTCTCATACCTTACAAGCATCAATGTTTCATTTAATGATTTAGAAGGTGAA
TTACCCAGTGGTGGTGTGTTTGTAAATTCCACTCTGCTATCATTTCTCGGGAACAAAGGT
CTATGTGGAATGCACATATTGGAGCTTCCCGCTTGTCCTATCACTAATCCTGGACAACAA
TCAGTGTCTAAGAAACTTGTGCTAAAAATTGTTACTCCAGTGGTTATTTCATTCTTTCTG
ATATTCTTGTTGGTTTCAATTTGGATAATGAAACGAAAGAAGAAAGGGAAGTCCAAAGAT
GTTGAAAAGGTTCTGGAGATCAAAACTTATCAATTGATTTCTTATCATGAGATTCAACGA
GCAACAAATAATTTTGATGGATCCAATTTAATTGGTGAGGGAAGCTCTGGCTCTGTGTAC
AAAGGCACATTCTCAAGTGGAACTATGGTGGCCATAAAGGTTCTGGATTTGGAAAATGAG
CAAGTATGCAAGAGGTTTGATACAGAATGCGAAGTGATGAGAAATGTCAGACATAGAAAT
CTTGTTCCAGTGGTTACTACTTGTTCTAGTGACTATATAAGAGCCTTTGTTCTGAAATAT
ATGTCAAATGGGAGTCTTGAGAATTGGTTGTACAGAGAAGCTCGCCACTTGAACCTTCTT
CAAAGAGTCACTGTAATGCTTGATGCGGCTATGGCAATTGAATATCTACATCATGGCAAT
GACACTGCGATAGTTCATTGTGACATAAAGCCAGCCAACGTTCTTTTGGATGAAGATATG
GTGGCGCATGTTGGTGATTTTGGAATCTCTAAGATTTTAGCCGTAAGCAAGTCCATGACA
CAAACCGAGACATTGGGCACTCTTGGATACATTGCACCAGAGTACGGCTCAGAAGGAATA
GTGTCGGCTAGTGGTGATGTTTACAGTTACGGCATCATGTTGATGGAGGTTTTGATGAAA
AGAAGGCCAACAGATGAAGAGATATGCAATGAAAATCTTGACTTGAGGAAATGGATAACA
CAATCATTTTCAGGGAGTATGATGGACGTTGTGGATGCCAATCTTTTTTCCGAGGAAGAA
CAAATCACTTGTAAAAGTGAAATCTGCATAGGGTCCATGATAGAATTGGGTTTAGACTGC
ACAAAGGAAATGGCAGAATCAAGAATAAGCATGAAAGAAGTAGTGAAGAGGCTTAACAAA
ATCAACAACACATTTCTCGAAACATAG

Peptide Sequence

PEP ID

PGSC0003DMP400040906
PEP Infomation

pacid=37475061 transcript=PGSC0003DMT400060792 locus=PGSC0003DMG400023643 ID=PGSC0003DMT400060792.v4.03 annot-version=v4.03
Sequence

MEKHIFLLILLFLLQFPISIASSNDTDQQALLAFQNLITSPNQFLANNWTKNASFCSWFG
VTCSARRLRLVALALPNLQLQGTITGIRALLVRELNLENNLFNGGIPYGLGKLPRLRVID
FQNNQLQGSIPTSLFQHQRVQIISLAFNELSGEMWKGPWYVPELKVLDLANNSLTGIIPP
YVGNATKLMNFDLSGSRINGTIPMEISNLSQLASLSLVDNQLTGFIPGSLFNISSLLGVT
LGLNHLSGPLLLDEGNIESNLKILSISFNQISGRIPSNICQLTQLKILSISFNNITGDIP
KNIDCLAKLEMFLISENAISGTIPTSLGNISTLQHLDSGDNRLEGQVPQELGKLSNLRVL
NFHKNFNLIGQIPKAIFNISSLEAIDFSFNNLSGRIPATTDLHLPNLKEFMLAFNQLEGE
IPQYIANASKLEILALNYNFLTVAIPTNLGNLRELQSLFLDHNQLTNEPREPKLLFLNSL
VNCRMLKYVDVSFNPLNGVLPNSIGNLSSTIEVFDIRNAHIYGLIPTSIGNMSGLISLVF
NENNLTGYIPPEIGKLKQLQGLYLFNNKLQGHIPEAVCHLSNLVELEMDGNELSGSIPEC
LGNLGMLLYLSLGSNEFSPKFPSSLWKMSGLLYLNMSHNSIEGEVPPTIGELKAIEELHL
SGNHFSGQVPSRLGDLQRLKSLDLSNNSFSGSIPLSITNLMSLEDLDLSLNALSGTIPKS
LEKLSYLTSINVSFNDLEGELPSGGVFVNSTLLSFLGNKGLCGMHILELPACPITNPGQQ
SVSKKLVLKIVTPVVISFFLIFLLVSIWIMKRKKKGKSKDVEKVLEIKTYQLISYHEIQR
ATNNFDGSNLIGEGSSGSVYKGTFSSGTMVAIKVLDLENEQVCKRFDTECEVMRNVRHRN
LVPVVTTCSSDYIRAFVLKYMSNGSLENWLYREARHLNLLQRVTVMLDAAMAIEYLHHGN
DTAIVHCDIKPANVLLDEDMVAHVGDFGISKILAVSKSMTQTETLGTLGYIAPEYGSEGI
VSASGDVYSYGIMLMEVLMKRRPTDEEICNENLDLRKWITQSFSGSMMDVVDANLFSEEE
QITCKSEICIGSMIELGLDCTKEMAESRISMKEVVKRLNKINNTFLET*

Transcript Sequence

Transcript ID

PGSC0003DMT400060792
Transcript Infomation

pacid=37475061 locus=PGSC0003DMG400023643 ID=PGSC0003DMT400060792.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGCACATTTTCTTATTGATACTTCTCTTTCTACTTCAATTTCCTATATCAATT
GCTTCCTCAAATGATACTGACCAACAAGCCCTACTAGCTTTCCAAAATCTTATTACAAGT
CCCAATCAATTTTTGGCTAATAATTGGACCAAGAATGCATCTTTTTGCTCTTGGTTCGGT
GTCACGTGCAGTGCAAGAAGGCTAAGGCTTGTGGCCTTGGCTCTTCCTAATTTGCAACTT
CAAGGCACAATTACCGGGATTAGGGCATTGCTTGTCAGAGAGCTCAATCTCGAGAACAAC
TTATTCAATGGGGGCATCCCTTACGGACTTGGCAAGTTGCCTCGCTTGAGAGTCATTGAT
TTTCAAAACAATCAGCTCCAAGGAAGTATTCCAACAAGTCTATTTCAACACCAGAGAGTT
CAAATCATTTCATTGGCTTTCAATGAACTCAGTGGTGAAATGTGGAAAGGGCCATGGTAT
GTACCAGAACTCAAAGTCTTAGATCTCGCGAACAATAGCCTCACGGGTATAATCCCTCCT
TATGTTGGTAATGCCACAAAATTGATGAACTTCGATTTGTCTGGGAGTAGAATCAATGGT
ACCATTCCAATGGAAATTAGTAATTTGAGCCAACTTGCATCTTTGTCCTTGGTTGATAAT
CAGTTAACAGGTTTTATTCCTGGATCACTGTTTAACATTTCATCACTACTTGGCGTAACT
CTGGGATTGAATCACCTTTCTGGTCCTCTCTTGCTTGATGAAGGGAATATTGAGTCAAAT
CTGAAGATACTAAGTATATCTTTCAATCAAATTTCTGGTCGCATTCCTTCTAACATATGC
CAACTCACACAGCTCAAAATTTTGTCCATATCTTTCAATAACATAACTGGAGACATACCC
AAAAATATTGATTGTCTAGCCAAGCTCGAGATGTTCTTAATTAGTGAGAATGCAATAAGT
GGAACTATTCCTACTTCATTGGGCAATATTTCCACTCTGCAACATCTTGATTCGGGGGAC
AATCGGTTGGAGGGACAAGTTCCTCAAGAATTAGGGAAGCTATCAAATTTGAGGGTGTTA
AACTTTCACAAGAATTTCAATCTTATTGGTCAAATTCCAAAGGCTATTTTCAATATATCT
TCTTTGGAAGCGATTGATTTCAGTTTCAATAACCTCTCAGGTAGAATTCCAGCCACTACC
GATCTTCATCTTCCGAACCTTAAAGAGTTTATGTTGGCATTCAATCAGCTCGAAGGAGAA
ATTCCTCAATACATAGCAAATGCTTCCAAGCTTGAGATACTGGCGCTAAATTATAACTTT
CTGACAGTTGCTATTCCTACTAATTTAGGAAATCTTCGCGAGCTGCAATCACTGTTCCTA
GATCATAATCAACTTACCAATGAACCAAGAGAGCCTAAGTTGTTATTCTTGAATTCTTTG
GTGAACTGTAGGATGCTGAAATATGTAGATGTGAGTTTCAATCCGTTGAATGGCGTTCTT
CCCAATTCTATTGGGAATCTTTCATCTACTATTGAAGTATTTGATATAAGAAATGCACAC
ATCTATGGCCTCATTCCCACAAGTATAGGCAACATGAGCGGTCTTATATCCCTAGTCTTT
AATGAAAACAACTTGACAGGATATATTCCTCCAGAGATTGGTAAGCTTAAACAACTCCAA
GGTCTGTACCTATTTAACAACAAATTGCAGGGACATATTCCAGAGGCGGTATGCCATTTA
TCTAATTTGGTCGAATTAGAAATGGATGGTAATGAACTCTCTGGATCAATTCCAGAATGT
TTAGGAAATCTTGGGATGCTACTATATCTTTCGTTGGGTTCAAATGAATTTTCACCAAAA
TTTCCCTCGAGTCTTTGGAAGATGAGTGGACTTCTCTACCTAAACATGTCACATAATTCT
ATAGAGGGAGAAGTTCCACCAACTATTGGAGAACTGAAAGCCATTGAAGAACTACATCTT
TCCGGTAATCACTTTTCAGGCCAGGTACCAAGCAGATTGGGAGACCTCCAAAGATTGAAG
TCTCTTGACCTATCAAACAATTCATTTTCAGGCTCAATTCCATTATCCATTACCAACTTG
ATGAGCTTAGAAGACTTGGATTTGTCTTTAAATGCATTGTCAGGTACTATTCCTAAGTCT
TTGGAAAAACTCTCATACCTTACAAGCATCAATGTTTCATTTAATGATTTAGAAGGTGAA
TTACCCAGTGGTGGTGTGTTTGTAAATTCCACTCTGCTATCATTTCTCGGGAACAAAGGT
CTATGTGGAATGCACATATTGGAGCTTCCCGCTTGTCCTATCACTAATCCTGGACAACAA
TCAGTGTCTAAGAAACTTGTGCTAAAAATTGTTACTCCAGTGGTTATTTCATTCTTTCTG
ATATTCTTGTTGGTTTCAATTTGGATAATGAAACGAAAGAAGAAAGGGAAGTCCAAAGAT
GTTGAAAAGGTTCTGGAGATCAAAACTTATCAATTGATTTCTTATCATGAGATTCAACGA
GCAACAAATAATTTTGATGGATCCAATTTAATTGGTGAGGGAAGCTCTGGCTCTGTGTAC
AAAGGCACATTCTCAAGTGGAACTATGGTGGCCATAAAGGTTCTGGATTTGGAAAATGAG
CAAGTATGCAAGAGGTTTGATACAGAATGCGAAGTGATGAGAAATGTCAGACATAGAAAT
CTTGTTCCAGTGGTTACTACTTGTTCTAGTGACTATATAAGAGCCTTTGTTCTGAAATAT
ATGTCAAATGGGAGTCTTGAGAATTGGTTGTACAGAGAAGCTCGCCACTTGAACCTTCTT
CAAAGAGTCACTGTAATGCTTGATGCGGCTATGGCAATTGAATATCTACATCATGGCAAT
GACACTGCGATAGTTCATTGTGACATAAAGCCAGCCAACGTTCTTTTGGATGAAGATATG
GTGGCGCATGTTGGTGATTTTGGAATCTCTAAGATTTTAGCCGTAAGCAAGTCCATGACA
CAAACCGAGACATTGGGCACTCTTGGATACATTGCACCAGAGTACGGCTCAGAAGGAATA
GTGTCGGCTAGTGGTGATGTTTACAGTTACGGCATCATGTTGATGGAGGTTTTGATGAAA
AGAAGGCCAACAGATGAAGAGATATGCAATGAAAATCTTGACTTGAGGAAATGGATAACA
CAATCATTTTCAGGGAGTATGATGGACGTTGTGGATGCCAATCTTTTTTCCGAGGAAGAA
CAAATCACTTGTAAAAGTGAAATCTGCATAGGGTCCATGATAGAATTGGGTTTAGACTGC
ACAAAGGAAATGGCAGAATCAAGAATAAGCATGAAAGAAGTAGTGAAGAGGCTTAACAAA
ATCAACAACACATTTCTCGAAACATAG