Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400060787
CDS Infomation

pacid=37475315 polypeptide=PGSC0003DMP400040901 locus=PGSC0003DMG401023640 ID=PGSC0003DMT400060787.v4.03 annot-version=v4.03
Sequence

ATGGAGGAGCACATTTTCTTATTGATTTTTCTCTTTTTCTCTGCTTTTGTATCAGCTGCA
CCCTCAAATGAGACAGACCAAGAAGCTCTACTAGCTTTTCAAAATCTTATTACAAGTCCC
AATCATTTTTTGGCCAATAATTGGACCAAGAATGCGTCTTTTTGCTCTTGGTTCGGTGTC
ACGTGCAGTTCAAAAAGGCAACGGGTTGTAGCCTTGAATCTTCCTAATTTACAACTTCAA
GGCACAATTTCTCCTTCTTTGGCCAATTTGTCCTTTCTCAGAGAGCTCAATCTCGAGAAC
AACTTATTCCATGGGGGCATCCCTTATGGGCTTGGCCACTTGCCTCGCTTGCGTGTGATT
GATGTTAAAAACAATCAGCTCAACGGAAGTATACCAACAAGTCTATTTCAAAACCGTAGA
GTTCAAGTAATTTCATTGGCTTTCAATGAACTCAGTGGTGAAATGTGGAGAGGGCCATGG
TATGTACCTGAACTCAGAGTCTTAAATCTCAGGAATAATAGCCTCACAGGTATAATTCCT
CCTGCTATTGGAAATGCCACAAAGTTGCTGAACTTTAGTTTGTCTGTTAATAGAATCAGC
GGCAACATTCCTAAGGAGATCGTTAATCTGAGCCAGCTTGCAGTTTTGTCCTTGACTGAT
AATCAATTAACAGGTCCCATTCCTGAAGCATTGTTTAATATCTCGTCACTACTTTCTGTA
TCTCTGGGAAAGAACAGCCTATCTGGTCCTCTCTTGGTTGAAAAAGGAAATATTTTATCA
CATCTGGAGAGGTTAAGTTTAACTCACAATCAAATTTCTGGTCGAATTCCTTCCAACATC
TGCCAACTCATACAACTTAAAATATTGTCCATATCTTTCAACAACATAACTGGAGAAATA
CCCAAAAATATTGATTGTTTAACGAAGCTCGAGGAGTTTTATATTGGTAATAATCCAATA
GATGGGACTATTCCCACTTCATTGGGAAATATTTCCACTCTGCGAAATCTTTACTGCGGA
AGCAATAGCTTGGAGGGGCCAATTCCTCCAGAACTGGGTAAGCTATCAAATTTGATAGAA
TTCGATTTTGAAGAAAATTATAATCTTATAGGTCAGATTCCAGAGGCTATTTTTAATATA
TCTTCTTTGAAACACATTGCGTTAACTTTGAACAAACTCTCGGGGAGAATTCCAACCTCT
ACTGGTCTTCATCTTCCAAACCTCTTAGAACTTCACTTGACTGGCAATGAGCTTGAAGGG
GAAATTCCTCCGCATATCACAAATGCCTCCAAGCTTGAAAATTTGGGGTTAGCACACAAC
TTCTTCAGTGGCACTATTCCAACTCATTGGGGAAGTCTTCCTGATCTGCGATTTCTTTTC
CTACATGATAATCAACTTACCAGTGAACATGAGTTGCCGTTCTTCGAATCTTTGGCAGAC
TGTAGGATGTTGCAATATCTAGATGTGGGTTACAATCCATTGAATAGCATTCTGCCAAAT
TCAATAGGGAATCTTTCATCTACTATTGAATTCTTTGAAATAAGCGATGCTCACATCAAT
GGCCTCATCCCCACAAGTATAGGCAACATGAGTGGTCTTACAACCTTAGTCTTTCAAGAT
AACAACTTTACTGGAAATATTCCTCCTGAGTTTGGTAAGCTTAAACAACTCCAAGGGCTG
TATCTAAATAACAATAAATTGAAGGGACATGTTCCTGAGGCAGTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400040901
PEP Infomation

pacid=37475315 transcript=PGSC0003DMT400060787 locus=PGSC0003DMG401023640 ID=PGSC0003DMT400060787.v4.03 annot-version=v4.03
Sequence

MEEHIFLLIFLFFSAFVSAAPSNETDQEALLAFQNLITSPNHFLANNWTKNASFCSWFGV
TCSSKRQRVVALNLPNLQLQGTISPSLANLSFLRELNLENNLFHGGIPYGLGHLPRLRVI
DVKNNQLNGSIPTSLFQNRRVQVISLAFNELSGEMWRGPWYVPELRVLNLRNNSLTGIIP
PAIGNATKLLNFSLSVNRISGNIPKEIVNLSQLAVLSLTDNQLTGPIPEALFNISSLLSV
SLGKNSLSGPLLVEKGNILSHLERLSLTHNQISGRIPSNICQLIQLKILSISFNNITGEI
PKNIDCLTKLEEFYIGNNPIDGTIPTSLGNISTLRNLYCGSNSLEGPIPPELGKLSNLIE
FDFEENYNLIGQIPEAIFNISSLKHIALTLNKLSGRIPTSTGLHLPNLLELHLTGNELEG
EIPPHITNASKLENLGLAHNFFSGTIPTHWGSLPDLRFLFLHDNQLTSEHELPFFESLAD
CRMLQYLDVGYNPLNSILPNSIGNLSSTIEFFEISDAHINGLIPTSIGNMSGLTTLVFQD
NNFTGNIPPEFGKLKQLQGLYLNNNKLKGHVPEAV*

Transcript Sequence

Transcript ID

PGSC0003DMT400060787
Transcript Infomation

pacid=37475315 locus=PGSC0003DMG401023640 ID=PGSC0003DMT400060787.v4.03 annot-version=v4.03
Sequence

ATGGAGGAGCACATTTTCTTATTGATTTTTCTCTTTTTCTCTGCTTTTGTATCAGCTGCA
CCCTCAAATGAGACAGACCAAGAAGCTCTACTAGCTTTTCAAAATCTTATTACAAGTCCC
AATCATTTTTTGGCCAATAATTGGACCAAGAATGCGTCTTTTTGCTCTTGGTTCGGTGTC
ACGTGCAGTTCAAAAAGGCAACGGGTTGTAGCCTTGAATCTTCCTAATTTACAACTTCAA
GGCACAATTTCTCCTTCTTTGGCCAATTTGTCCTTTCTCAGAGAGCTCAATCTCGAGAAC
AACTTATTCCATGGGGGCATCCCTTATGGGCTTGGCCACTTGCCTCGCTTGCGTGTGATT
GATGTTAAAAACAATCAGCTCAACGGAAGTATACCAACAAGTCTATTTCAAAACCGTAGA
GTTCAAGTAATTTCATTGGCTTTCAATGAACTCAGTGGTGAAATGTGGAGAGGGCCATGG
TATGTACCTGAACTCAGAGTCTTAAATCTCAGGAATAATAGCCTCACAGGTATAATTCCT
CCTGCTATTGGAAATGCCACAAAGTTGCTGAACTTTAGTTTGTCTGTTAATAGAATCAGC
GGCAACATTCCTAAGGAGATCGTTAATCTGAGCCAGCTTGCAGTTTTGTCCTTGACTGAT
AATCAATTAACAGGTCCCATTCCTGAAGCATTGTTTAATATCTCGTCACTACTTTCTGTA
TCTCTGGGAAAGAACAGCCTATCTGGTCCTCTCTTGGTTGAAAAAGGAAATATTTTATCA
CATCTGGAGAGGTTAAGTTTAACTCACAATCAAATTTCTGGTCGAATTCCTTCCAACATC
TGCCAACTCATACAACTTAAAATATTGTCCATATCTTTCAACAACATAACTGGAGAAATA
CCCAAAAATATTGATTGTTTAACGAAGCTCGAGGAGTTTTATATTGGTAATAATCCAATA
GATGGGACTATTCCCACTTCATTGGGAAATATTTCCACTCTGCGAAATCTTTACTGCGGA
AGCAATAGCTTGGAGGGGCCAATTCCTCCAGAACTGGGTAAGCTATCAAATTTGATAGAA
TTCGATTTTGAAGAAAATTATAATCTTATAGGTCAGATTCCAGAGGCTATTTTTAATATA
TCTTCTTTGAAACACATTGCGTTAACTTTGAACAAACTCTCGGGGAGAATTCCAACCTCT
ACTGGTCTTCATCTTCCAAACCTCTTAGAACTTCACTTGACTGGCAATGAGCTTGAAGGG
GAAATTCCTCCGCATATCACAAATGCCTCCAAGCTTGAAAATTTGGGGTTAGCACACAAC
TTCTTCAGTGGCACTATTCCAACTCATTGGGGAAGTCTTCCTGATCTGCGATTTCTTTTC
CTACATGATAATCAACTTACCAGTGAACATGAGTTGCCGTTCTTCGAATCTTTGGCAGAC
TGTAGGATGTTGCAATATCTAGATGTGGGTTACAATCCATTGAATAGCATTCTGCCAAAT
TCAATAGGGAATCTTTCATCTACTATTGAATTCTTTGAAATAAGCGATGCTCACATCAAT
GGCCTCATCCCCACAAGTATAGGCAACATGAGTGGTCTTACAACCTTAGTCTTTCAAGAT
AACAACTTTACTGGAAATATTCCTCCTGAGTTTGGTAAGCTTAAACAACTCCAAGGGCTG
TATCTAAATAACAATAAATTGAAGGGACATGTTCCTGAGGCAGTATGA